Chroicocephalus ridibundus (black-headed gull): 134514963
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Entry
134514963 CDS
T10910
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03030
DNA replication
crid03410
Base excision repair
crid03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134514963 (FEN1)
03410 Base excision repair
134514963 (FEN1)
03450 Non-homologous end-joining
134514963 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crid03032
]
134514963 (FEN1)
03400 DNA repair and recombination proteins [BR:
crid03400
]
134514963 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crid04147
]
134514963 (FEN1)
DNA replication proteins [BR:
crid03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
134514963 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
134514963 (FEN1)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
134514963 (FEN1)
Exosome [BR:
crid04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134514963 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
XPG_I_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
134514963
NCBI-ProteinID:
XP_063189493
LinkDB
All DBs
Position
4:complement(1855340..1858913)
Genome browser
AA seq
382 aa
AA seq
DB search
MGIHGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGADVLQNEEGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELSKRTERRAEAEKHLQEAQEAGEE
ENIEKYSKRLVKVTQQHNDECKKLLTLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASETKKLPIQEFHLNRILQDLDLTWEQFVDLCILLGCDYCESIRG
IGPKRAIELIKEHKSIEKIVQQIDTKKYPLPENWLHKEAQKLFLEPDVVDPDTVELKWTE
PNEEQLVQFMCGEKQFNEERIRNAVKRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPET
KGSAKKKAKTNNASAAKTKKGK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccatggcctggccaagcttattgccgacgtggctcctggcgccatccgggag
aatgacatcaagtcttacttcggccggaaggtagctatagatgcctccatgagcatctac
cagttcctgatcgctgtgcggcagggagctgacgtcctgcagaatgaggagggtgagacc
acgagccacctgatgggcatgttctaccggaccatccgcatggtggagaatggcatcaag
ccggtttacgtcttcgacggcaaacccccgcagctgaagtcaggggagctctcaaagcgg
actgagcgccgggctgaggccgagaaacacctgcaggaggctcaggaggccggagaggag
gagaacattgagaagtacagcaagaggctggtcaaggtgacccagcagcacaatgatgag
tgcaagaagttactaacgctgatgggcatcccctacgtggaggcgccgggggaggctgaa
gccagctgcgctaccttggtgaaggccgggaaggtctatgcagctgccacagaagacatg
gattgcctgaccttcggtagtcctgtgctgatgcggcatcttactgccagcgagacgaag
aagctgcccatccaggagtttcacctgaaccgtattctgcaggatcttgacctgacctgg
gagcagtttgttgatctgtgtatcctcctgggctgtgactactgcgagagcatccgcggc
attgggcccaagcgtgctatcgagctcatcaaggagcacaaaagcattgagaagattgtt
cagcagatagacaccaagaagtaccctctgcctgagaactggctgcacaaagaggcccag
aagctctttctagagcctgacgtggtcgaccctgacaccgttgagctgaagtggaccgag
cccaatgaagagcagctcgtccagttcatgtgcggggagaagcagttcaacgaagagcgg
atccgcaacgcggtcaagaggctgagcaaaagccggcagggcagcacgcagggccggctg
gacgacttcttcaaggtgacgggttccatcacatcagccaagcgcaaagagccagagacc
aaggggtcggcaaagaagaaagccaagaccaacaacgcctcagccgcaaagaccaaaaag
ggaaaatag
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