Chroicocephalus ridibundus (black-headed gull): 134515003
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Entry
134515003 CDS
T10910
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134515003 (BRF1)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
134515003 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
134515003
NCBI-ProteinID:
XP_063189557
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All DBs
Position
4:complement(63709956..63889287)
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AA seq
681 aa
AA seq
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MPGGRVCAACGCSEIEVDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDGAGKTPTLGGGFHANLGKESRAQTLQNGKRQIHHLGNQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSFTAGQK
KLKLQQLEKALSKKLEDFEGEISSYQDEIEIELENSRPKAKGVFANFTKDDSIEDNTSSI
LGEEEAEDEELEAAANHLNKDFYNELHEKDRLKKHEDGECKNGNEALVRPPALESLLGPL
PTAASLGITESIKECISTKDREPGENTGDGELDLSGIDDSEIDRYILNETEAQIKAELWM
KENADYLKEQKEKEARIAKEKELGIYKEHKPKKSAKKREPIQASTAGEAIEKMLEQKKIS
SKINYNVLRDLNSKGSNTPKKEDDSTDDSTNTKKLSRRKSIASRNIANPVNSVGKRLRPL
ISTQLAKKAATEEVTFPNAQAEAPDLEKPAAVLVESGPVAYNPDEEVEEEEIEEDDDHCM
SALQLMGGNDYGCDMDDDDGY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcggacgggtgtgcgccgcctgcggctgctcggagattgaggtggacgcggcg
cggggggacgcggtgtgcacgggctgcggctcggtgctggaggacaacatcatcgtctcc
gaggtgcagttcgtggagaacagcggcggcggctcctctgccgtggggcagttcgtgtcg
ctggacggtgcaggcaaaacaccgactttaggaggaggattccatgccaatctgggaaag
gagtcacgagcacaaactctacagaatgggaaacgtcagattcaccacttgggaaaccag
cttcaactcaatcaacattgtctggatactgcctttaattttttcaagatggctgtgagc
aaacacctaacccgggggaggaagatgacccacgtaattgctgcatgtctctacctggtg
tgtaggacagaaggaactcctcacatgttacttgacctcagtgaccttcttcaggtgaat
gtctatgtgctgggaaaaactttccttctgttggccagagaactctgcataaatgctcca
gccatagatccatgtctgtatattcctcgttttgcacacatgcttgagtttggggataag
aaccacgaggtgtccatgacggctctcaggctgttgcagagaatgaagcgggactggatg
cacaccggccgccggccctctgggctctgtggagcagctctgctagtagcagcaagaatg
catgatttccgacgtactgttaaagaggtcatcagggtggtcaaggtttgtgagtctaca
ttaaggaaaaggttgaccgagtttgaagatacaccaacaagtcagctaaccatagatgag
ttcatgaagattgacttggaagaagaatgtgatcctccttcgtttacagctggtcaaaaa
aaattgaagctacagcagcttgagaaggcgctatcgaaaaagctggaggattttgaaggt
gaaatatcgagctatcaagatgaaatagagattgaattagaaaacagtagaccaaaagca
aaaggcgtatttgcaaatttcactaaagatgattctatagaagataatacctctagcata
cttggagaggaggaggcagaagatgaggaactggaagcagccgctaatcacttaaacaag
gacttttataatgaactccatgagaaggacagactaaagaaacatgaagatggggaatgc
aaaaatggaaatgaagctcttgtaagaccacctgcactggaatccttgctcggcccgctc
cccactgcagctagccttggcataacagagtccataaaagagtgcatatccactaaggac
cgagagcctggtgagaatacaggagatggtgaattagatctgagtgggatcgacgacagt
gaaatagatcggtatatacttaacgaaacagaagctcagataaaagcagagctgtggatg
aaagaaaatgcagattatttgaaggaacaaaaagaaaaggaagcaagaatagcaaaagag
aaagaacttgggatttataaggaacacaagccaaagaaatctgcaaagaagcgggagcca
attcaagccagcacagcaggagaggcaattgaaaagatgttagaacagaagaaaatctca
agtaaaattaattataatgtgctaagggacctgaacagcaaaggaagtaacacaccaaag
aaagaggatgacagcactgatgacagcaccaacaccaagaagctgtcaagaagaaaatct
attgccagtaggaatatagccaaccctgtaaacagtgtgggaaaaagattaagacccttg
atttcaacacagcttgctaaaaaggctgccactgaagaggtgacttttccaaatgcacaa
gcagaagcccccgacttagaaaaaccagcagctgtgctagtggagagtggcccagtagct
tacaaccccgatgaagaggtggaagaggaagaaatagaagaagatgatgatcactgcatg
agcgccttgcagttaatgggaggaaatgattatggctgtgatatggacgatgatgatggc
tattag
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