Chroicocephalus ridibundus (black-headed gull): 134515259
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Entry
134515259 CDS
T10910
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134515259 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
134515259 (EDC4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134515259
NCBI-ProteinID:
XP_063190105
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Position
4:73175907..73214734
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AA seq
1402 aa
AA seq
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MASSSSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSL
AKPVHRNISLGALQEKQVICLSGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIRVASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDNTPLNTSRRIIWCPFI
PDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMSASMPSHSSH
EEFAFPDHMADLSTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAF
MTPSTSLQQIAVSPGSSVSSLTAVTAMSSTSVTDAAMPRPSEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVAPGNPSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAAAPSGLPAEVLEPSHHADSMASAASALHLLSP
RNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
TQRLPVKDWKAKASPRASPKLKRKGKKDDGDMNQSPRSSNNQVTPEFQDELMCILRSQQR
ELSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQL
QEHLSQQLSQSLSTAVCTRLERTVREEMKKTVPQCISKSVDPIAGQLSNTIAAKLTAVEG
TLKESITKLVKSKNLTDAVVRATADTLQGPIQAAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYVQQLETHLKNKKVREQEARDPLLNQLRQLISTFQSSTEQLAATVAASVHAE
VQHQLHIIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHL
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLL
SLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPHN
NLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctccagcatcgacatcgaggacgcgacccagcacctgcgggacatcctc
aagctggaccgaccgggaggttcagtgaatgagaaccagagaccgtcaaattcgtataac
ggagacctgaatggactgctggtgccagatcccatcgtggccggagatggaccttctttg
gctaagccagtgcatcgcaacatttctctgggagccctgcaggagaagcaagtcatctgc
ctttctggtgatgacagctccacttgcgtagtgatatcagcaaaagatgtggagatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacag
cctgtggctagatacgactgggagcagaaatactattacggcaatctgatagctgtttca
aactcttacctggcttatgccattagagttgccagcaacggctccgctatggtgcgggtg
ttgagtgtcagcactgctgagcggaccttgctgaaaggattcacaggcggtgtggcagac
ctggcttttgctcatctcaactccaaccagctggcgtgcctggatgaggccggcaacctt
tttgtctggcgcctggctatggataaagaaaaaatccaagaggagatcttggttaacatc
aagcgacctgacaataccccgttgaacacctctcgaagaatcatctggtgccctttcatc
ccggatgataacgaggagagcggtgaagagggaagtcagacgttggcgttgttgcatgag
gatagggcagaggtgtgggatttggacattatccgaacaaacaacagctcctggccagtg
gaagtgcctagcatcaaagagggcttcatcgtagtgaaaggccacagcacgtgcctgagc
gagggagcactttctccagatggaactgtgttggccacagcaagccatgacggttttgtc
aaattctggcagatctatattgaggggcaagatgagccaaggtgtcttcatgagtggaaa
ccccatgatgggaggcctctttcctgcctgctcttctgtgacaaccataaaaagcaagac
ccagaggttcccttctggagatttctcatcacaggagcagatcagaatagagaactgaag
atgtggtgcactgtgtcttggacttgtctacaaactgtccgcttttctcctgacatcttc
agctccatgagtattcttcccagcctgaaagtctgcctggacctctcagctgaatatctg
atactgagtgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagag
gagggcaaagcttacttcagctccatctcagagttcctcctcacccacccagtcctaagc
tttggcatccaggcagtgagccgctgtcggttaaggcacaccgaagtgcttccagcagaa
gaggaaaacgacaacttgagtgtagaaggtgctcagggagctggggctgtggaatcagca
gcaggcgtgctgataaaactcttctgtgtgcacaccaaggccctacaggatgtgcagatt
agattccagcctcttcatagccctgacatgagtgcatccatgccttctcacagctctcat
gaagaatttgcctttccagaccacatggctgatctaagcacagaagggctgggatctgaa
aaaggctcggtgcacgggtctcaaccagatctgcggcgtattgctgatctgcccgtacca
gcagacttcctttctctctcaaatgatgctaagcccaagctgatgactccagatgcgttc
atgacaccgagtacatctcttcaacagatcgctgtgtctccgggcagcagcgtcagttcc
ctgacggcagtcacagccatgagcagcacttctgtcacggatgctgctatgcccaggccg
tcggaagacttgactgtgagcccaaagatgcagctggacaccagcctgacactgagcagc
agtagcagcagtctccagactagccctaggagccattcggttcttatcccaggcctccct
gacaagctaacgccaaaggcacctgttccagtcgcgccaggaaacccctctctagcactg
gaactgcaggaggtggagcccttggtggtgccccaggcttctcccacccgcgagcgctcg
ccagacgtcatttcctctgcctccacagccatgtcccaggatatcccagagattgcttcc
gagactttgcaacgcagctttgcggcagctccgtctgggctccctgcggaggtgctggag
cccagtcatcacgcagacagtatggcatccgctgcctcagctttgcatttgctgtctccg
aggaaccggcacaattccgagcacagccaccactctttggacatgcctccagtggaggtg
gacagactgaatgctccatcgttactggagactgctttaactcaggaaaatgcatcttct
gacagtgtcgtgagtcagccgtggccagcagctcctgacataaccagagaaaccaggaac
agcatggcagacagcccaagggatgaggttgaagaaaagcacaagagctcttcctatcat
cggcacagctaccacctgctgcagcatgacagccaggatgctagtgcagaacaaagtgac
catgatgatgaagttgcaagcttggcttctacgtcaggtggatttggtgccaaagcgtct
acgcagaggctgcctgtgaaggactggaaagccaaggcgtccccccgggcttccccaaag
ctaaagcggaagggcaagaaagatgacggggatatgaaccagtcgccaagatcctctaac
aaccaggtgacaccggagttccaggatgagctgatgtgcatactgaggagccaacagcgg
gagctctccgagctgcgtcagaaccagatggagctgctgcagagactcacggatcacctt
gatgccattcagagctcccttatgggccatgtggagagggtgattgactcccagcaggag
caggaacagagaagactagaccgagcgctgacggaaggacagcagcgcaatgggcagctc
caggagcatctgtctcagcagctctcccagtccctttccactgctgtgtgtacccgtctg
gagaggaccgttcgcgaggagatgaagaagaccgtaccccagtgcatttccaagagtgtg
gaccctattgctggccagttaagtaacactattgctgccaagctgactgctgttgagggg
acgctgaaggagagtatcaccaagctagtgaaatcaaagaaccttacagatgctgtcgtg
agggcaacggccgataccctgcaggggccgatccaggcagcctacagggaagcgtttcag
agcgtcgtgctgccagccttcgagaagagctgccagtccatgttccagcaaatcaatgac
accttcaagcagggcacacaggaatatgtccagcagctcgagactcacttgaagaacaag
aaagtacgagaacaggaggcccgggacccgctgctgaatcagcttcgacagctcatcagc
accttccagagcagcaccgagcagctggctgccactgtcgcagccagcgtccatgctgag
gtgcagcatcagctgcatattatcgtgggcaacatgcaggagtctattttggcccaggtg
cagagggtcattaaaggagaagtgagcctggctatgaaggaacagcaagcagctgtcacc
tcgagcatcgtccaggcaatgcgctcggcggccgggactcccatcccctccgctcacttg
gatttccagtctcagcaaactcacatccttcagctgctccagcagggacacctcaaccaa
gctttccagcaggctctaacagcagctgatctcaacctggtcctgtacgtctgcgagacc
gtggatactcagcaagtattcggccagcatccgtgcccgctgtcccagcctgtgctgctc
tctctcattcagcagctctcctccgatttgggtactcgcacggaactgaagctgaattac
ttggaggaagcggtgatgcacctggaccacagtgaccccatcacccgagaccacatgggg
tcagtcatgaaccaggtgcggcagaagctcttccagtttctccaggtggaaccccacaac
aatctgagcaagcctgcccgtcgcctcatgatcatgctccagggcctggtcacccctggc
atgacctag
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