Chroicocephalus ridibundus (black-headed gull): 134515276
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Entry
134515276 CDS
T10910
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134515276 (CTCF)
03036 Chromosome and associated proteins [BR:
crid03036
]
134515276 (CTCF)
Transcription factors [BR:
crid03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
134515276 (CTCF)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134515276 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
134515276
NCBI-ProteinID:
XP_063190138
LinkDB
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Position
4:73430707..73470163
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AA seq
728 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDACHIAPNQADGGEVVQDVNSGVQM
VMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEQEAPAPPPSKKRRGRPPGKA
ATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcagtcgaagctattgtggaggaatcggaaacatttattaaggggaaa
gagagaaaaacctatcaaagacgccgtgaaggtgggcaggaggacgatgcttgtcatata
gcaccaaatcaagcagacggaggtgaagtagtgcaggatgtcaacagtggtgtgcagatg
gtgatgatggagcagctggatccaactcttcttcaaatgaaaacggaagtaatggaaggt
gcagtgcctcaagaaacggaggccacggtggatgacacgcagatcataacacttcaggtt
gttaatatggaagagcagccaataaaccttggtgagcttcaactagtccaagtacctgta
ccagtgactgtacctgttgccaccacatctgtggaagaacttcagggagcttatgaaaat
gaggtttccaaaggaggcctgcaagagggagagcccatgatctgtcacaccctcccttta
ccagaaggcttccaagtagtgaaagtgggtgcaaacggggaggtggagacactggaacaa
ggtgaacttcagccacaggaagatcccaattggcaaaaagatccagactatcagccacca
gccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggaaggcaaagat
gtggatgtctctgtgtacgacttcgaagaggagcagcaggagggtttgttgtctgaggtc
aatgcagaaaaggtggtgggcaatatgaagccacctaaaccaacaaaaattaagaagaaa
ggtgtaaagaagacattccagtgcgaactgtgcagttacacttgtccgcgtcgttccaac
ttggaccgccacatgaaaagccacactgacgaaagaccacataagtgccatctctgtggc
agggctttccggacagtcacgttgctgaggaaccacctcaacactcacacaggtactcgc
cctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggttcggcat
cgccgctacaaacatacccatgagaaaccgttcaaatgctcgatgtgtgattatgccagt
gtggaggttagcaaattgaaacgccacattcgttctcacaccggagagcgtccgttccaa
tgcagcttgtgcagctacgccagcagggatacctacaaactgaagaggcacatgaggacc
cactctggagagaagccatatgaatgttacatctgccacgctcgcttcactcagagtggc
accatgaagatgcacattttgcagaagcacacggagaacgtggccaaatttcactgtcct
cactgtgatactgttatagcgagaaagagtgacttgggtgtccatttgcgaaagcagcat
tcctacatcgaacagggcaagaagtgccgctactgtgacgccgtctttcatgagcggtat
gcccttatacagcatcaaaagtctcacaagaatgagaagcgcttcaagtgtgaccagtgc
gattatgcgtgcagacaggagcggcacatggtcatgcataaacggacccatactggagaa
aagccttacgcctgtagccattgtgataaaaccttccgtcagaaacagctcctcgatatg
cacttcaaacggtatcacgatcccaactttgtccctgctgcctttgtctgttccaagtgt
ggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgctctggccta
gatggtggagaaggagagaacggaggagagacaaagaagggcaaacgcggccgaaagaga
aagatgcggtctaagaaagaagattcctctgatagtgaggaaaatgctgaaccagatttg
gatgataacgaagatgaggaggagacagcagtagaaattgaggccgagccagaagtcgag
caagaggctcctgcgccacctcccagtaagaaacgaagaggaagaccaccaggcaaagct
gctacccaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccagaacact
ggtgaaattgaaaatattatagttgaagtaaagaaagaacccgatgcggaaacagtagag
gaagaggaggaagctcagcctgctgtagtggaagctcccaacggagacctcactcctgag
atgattctcagcatgatggaccggtga
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