Chroicocephalus ridibundus (black-headed gull): 134515372
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Entry
134515372 CDS
T10910
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03022
Basal transcription factors
crid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134515372 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
134515372 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134515372 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
crid03400
]
134515372 (GTF2H1)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134515372 (GTF2H1)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134515372 (GTF2H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
134515372
NCBI-ProteinID:
XP_063190332
LinkDB
All DBs
Position
4:16808919..16834643
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVAPVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPIKKVKLQESIEY
EDLSKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMEAYVPKLTQ
VLSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtcatctgaagaagtgttactgattgtaaagaaggtacgtcagaagaagcag
gatggagctctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagaccga
ttcacagtcagccatatgtatgcagacataaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctagtattgcacgcaggggacacaaccaactttcacttctcc
aatgaaagcacagcagtgaaggagcgagacgcggtaaaggatcttcttcaacaactgttg
cccaagttcaaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagcacctagcaag
caggatgtgggcatctccgcagcatttctggctgatgtacggcctcaaacagatggctgc
aatggtctgaggtataatttgacttcggatatcattgaatccatatttcgaacatatcct
gcagtaaaaatgaaatatgcagaaaatgttccacataacatgaccgagagggaattctgg
acacgattttttcagtctcattatttccatcgggacaggctcaatacaggctcaaaagac
ctctttgcggaatgtgccaaattggatgaaaaagggttaaaagcaatggtgtctcaagga
gtgaaaaaccctctgatagatttaacagctttggaagataaaacattagatgaaggctat
ggtgttgctcctgtggcctctacatcaaatgcctcaaaatccgctagagaaagtagtaat
gctgccattataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcagccaccaattaaaaaggtgaaactgcaggagtccattgaatat
gaagatttatcaaagaataatagcattaaaactattgcactaaacttaaagaagtctgat
aggtattatcatggtccaactccaattcagtcacagcaatatgcaaccagtcaggatata
attaattcttttcatagtattaggcaagaaatggaagcatatgtacccaaactaactcag
gttctttcaagtggtgatgctactagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacgttcagtctgaa
ctaaaacacttgtacgtggcagtaggggaactgctacgacacttctggtcctgctttcct
gttaacacaccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggttacaaagctctgcccattccaagaaaagattcggagacagtatttaagcacaaat
ttggtaagtcatatagaagagatgctgcagacggcctacaataagttccatacatggcag
tcccggcgtatgctgaagaagacgtga
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