Chroicocephalus ridibundus (black-headed gull): 134515396
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Entry
134515396 CDS
T10910
Symbol
IRX5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134515396 (IRX5)
Transcription factors [BR:
crid03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134515396 (IRX5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
134515396
NCBI-ProteinID:
XP_063190386
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Position
4:complement(77026915..77030428)
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AA seq
473 aa
AA seq
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MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGDPGTPDTGAADPKAAPGCERLQESPSPRE
AEGSLSDSDCKEPAEERLDGPPAPHKPPGSSPLGPCPPGRGLPPASGEEPPPYRPPSAAA
GPPHAADLHPLLPAATGASVIHSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPA
VLGGGGPSRSPPRPRSPAAPCPFPNGAVLPRPLYYTAPFYPGYTNYGSFGALHGHPAGGP
AAAAPGAHFNGLNQTVLSRAESLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccgtcagcgtccttggctctctactcctgc
ccggcgtacagcaccagcgtgatctccggacccaggaccgatgaacttgggagatcttct
tcgggctccgctttttccccttatgccggatctaccgcctttaccgccccttccccgggt
tacaactcccacctccagtacggcaccgacccggccgccgccgccgccgccgccttcact
tcctacgtgggctcgccctacgaccacacgccgggcatggccggctccctgggctaccac
ccgtacgcggcgccgctcggttcctatccctacggggaccccgcgtaccgcaagaacgca
acgcgggacgccacggccaccctcaaggcctggctcaacgagcaccggaaaaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtc
tccacctggttcgccaacgcgcggcggcggctcaaaaaggagaataaaatgacctggacc
ccgcggaaccgcagtgaggacgaggaggaagaggagaacatcgacctggagaaaaacgac
gaggacgagccccagaaactggaggagaagggggaccctgggacgccggacacaggagcg
gcggatcccaaggcagcgccgggctgcgagcgcctccaggagtcccccagcccccgggag
gccgagggcagcctcagcgactcggattgcaaagagccggcggaggagcggctcgacggg
ccgccggccccccacaagccgcccggctcttccccgctggggccgtgcccgccgggccgc
gggctgccgccggcgagcggcgaggagcccccgccgtaccgtccgccctctgccgccgcc
gggccgccgcacgccgccgacctgcacccgctgctgcccgccgccaccggcgcctccgtc
atccactcgccgcagcaggcggccctcgccaagcccaagctctggtcgctggccgagatc
gccacctcggcggacaaggcgaaggaggccggcggcgaggcggcgccccccggccccgcc
gtgctgggcggcggcggaccgtcgcgctcgccgccgcggccgcgctcgccggcggctccg
tgccccttccccaacggggcggtcctgccgcggccgctctactacacggcgccgttctac
cccggttacacgaactacggctcattcggggccctgcacgggcaccccgccggcggcccc
gccgccgccgcccccggcgcccacttcaatggattaaaccagactgtcctcagcagagcc
gagagcctggctaaagacactaaaatgatcaggagccagtcccaagtagacctttgcaaa
gactcaccttacgaactgaagaaaggtatgtccaacatttaa
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