Chroicocephalus ridibundus (black-headed gull): 134515547
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Entry
134515547 CDS
T10910
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134515547 (ZC3H13)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
134515547 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
134515547
NCBI-ProteinID:
XP_063190715
LinkDB
All DBs
Position
1:34630000..34679305
Genome browser
AA seq
1648 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPSPRKSSKSPKRRSSPKSSSSASKKEKKTST
VSSPLLDQQRSSKSNQSKKKGPRTPSPPPPVQEETPLGKKHKEKHKAKERSEEKTREVKE
RGRDFERHKEKKEKQRDTSESSHRQKRSPSPADHSGSNSSPSREYSPPAARRRQTSRVPA
KSTSHKHNFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQR
TASPPARRSSSPYPPHSSSSPQRKRSPSRHRSPGREKGRHDRDRTSQSHDRRHERRDETR
GKREKERETRDDRDYDQEQSTSRDHRDDRESRDGRDRRDARDNRDRREPRESRDARDSRD
TRDYSRDTKDSRDQRDSRSTRDSHDYRDRDSRDAHKKDDQYQDDSRSYGRSHGREESSRA
ETRNDSRSDSRNESRSDRTGRSRGRGPELSDKGSRGTRGSQVDGHSSSGNYHDSWESRSS
YPDRDRYDSREQARDSSFERRHGERDRRDNRERDQRASSPVRHQGRSDDLERDERREDRR
VDRSDDRRDERARERERERERDRERERERDREREREKERELERDRARERERERERDKDRD
RERDRDRDHDREREREREREKEREREREERERERERERDRERERERERGRDRDKERDRQR
DWDDKEKGREDRRDKREDIREERSSRDVHEERKSKKRHRNESSPSPRQSPKRRREHSPDS
DAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHVAEERQSRWKEEERKSDRKESSRRYEEP
EFKERVSSADKQREQPDASEGSRSRVQENLGHRPSEERDASDRMHDDSKRKSKIQKKATK
KKKDDDSGVERYANESTTEESQVFSPKKGQKKKNVEKKRKRSKGDSEVSDEEIVPHHKKK
KGPRTPPVTKEELVEAPPEKAVAEVTQKREDTTFSDWSDEDVPERGDIVVPERSTEDSHR
KSHRTRGEKVEAPHVTIDDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQ
TARKRILHSSSRDRDRDRDREKKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSR
RSSPESDRQVHSRSGSFDSRERLQERDRHEHDRERERERREGRQRDWDRDVDKDWPRSRE
RERLREREREREKRRELDRERDRQLPDTAERERDRTLDISSQKESAKHSETKLDRDHEKE
FDGVCRDSAASEKERTDKDLGPSQGFEDGNEAEKVESLEGEDEAKIDDVQSLGSGAGEYE
PISDDELDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAALLK
FTPGAVMLRVGISKRLAGPELFTKIKETCQRVLEKPKDAENLFEHELGALNMAALLRKEE
RAGLLSDLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRLSLRLFKRK
TVCQVPGQEKTEDNKIPQPALQQEVCVS
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatccgatagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgtcaagacgttgaggcagagcca
cagaaacgaagtacagaggaatcatcctctcctgttaggaaagagtcttcacgaggaaga
catagagaaaaggaggatatcaaaattacaaaggagagaacaccggaaagtgaagaggaa
aatggggattgggaaacaaatagagaagactctgataatggagatgttaattatgattac
gatcatgagctgtctttggaaatgaagcgccaaaagattcagagagaactcatgaagttg
gaacaggaaaacatggagaaacgagaggaaatagtcattaaaaaagagatttctccagag
gtggttaggtctaaattatcaccatcgccatcaccaaggaagtctagcaaatctccaaaa
cgaagatccagtcccaaatcatcttcttcggctagtaagaaagagaagaaaacatctact
gtatcttccccacttttggatcagcagaggagttctaaaagtaaccagagtaaaaagaaa
ggtcctcgtacccctagtcctcctcctccagtacaagaggaaactcccctggggaaaaaa
cacaaagaaaaacataaagcaaaagaacgttcagaagaaaagacaagggaggtgaaagag
agagggcgtgattttgaaaggcacaaggagaaaaaagagaagcagagggatacttctgaa
agctcccatagacagaagcgttctcctagtcctgcagatcattctggcagtaattcttcc
ccttccagggagtattcaccacctgctgcaaggcgaagacaaacctcccgagttccagcc
aagtcaaccagtcacaaacataacttctcaccgtctcgcaggtctgcttccccatcaggt
cagcatcattctcccatatcctccagacatcactcctcttcatcacagtcaggctcctct
gttcaaagacattctccttccccacaccggaaaagaactccttctccatcctatcaaagg
acagcttccccacctgcaaggcgatcgtcttctccctatcccccacactcttcctcctct
cctcagaggaagcgaagcccttcaagacaccgatctccgggaagagaaaagggaagacat
gatcgtgatcggacttcacagtctcatgatagacgccatgagaggcgggatgaaactaga
gggaaaagagaaaaagaaagagaaacgagagatgatcgtgattatgaccaggagcagagt
acttccagggatcatagagatgacagagaatctcgtgatggacgagatcggagggacgca
agagacaacagagatcggagggagccaagggaatccagagacgctcgagactccagagat
acgagggattatagccgagataccaaagatagtcgtgatcagagagactcgcgttccaca
cgggattcccatgactacagagacagagacagtcgtgatgcccataaaaaggatgaccag
taccaggatgactcgcgcagctatggaagatcccatggcagagaggagagttctcgtgct
gaaacaaggaatgactccagaagtgactccagaaatgagagcagaagtgacagaactggc
agaagtcgaggcagaggtccagagttgtctgacaagggaagtcgggggactagaggatcc
caggttgatggtcacagcagtagtggaaactaccatgacagctgggaatcaaggagtagc
taccctgatcgggatcgctatgacagtcgagaacaagcaagggattcctcctttgaaaga
agacatggtgaacgggacaggcgtgataacagagaaagagatcagagagcaagctcaccg
gtacggcatcaaggacgaagtgatgacctcgagcgggatgaaagaagagaagaccgaagg
gtagatcggtctgatgacaggagagatgaaagggcccgggagagagagcgcgaaagggag
agagaccgagagagggaaagagaaagagaccgggaaagagaaagggagaaggaaagagag
ttggaacgagatcgtgctcgggaacgggagagggagagagagcgggacaaagacagggac
cgcgagcgtgaccgagacagggaccatgacagggaaagggaacgagaaagggagagggag
aaggaacgagagcgagagcgggaggaacgagaaagggagcgagagcgcgaaagagatcga
gagcgggaacgagaaagggagagaggtcgggacagggataaagaaagagatcgtcagaga
gactgggatgacaaagaaaaaggaagggaagaccgcagggataagagagaagatatccga
gaagaaagaagttcaagagatgtccatgaggaaagaaaatccaagaagcgtcacagaaat
gaaagcagtccaagtcctcgtcagtcacccaaacgtcgccgtgagcactctcctgatagt
gatgcttacaacagtggagatgataaaaatgaaaagcacagacttctgagccaggttgtg
cggccacaggaatcccggtcactgagcccctctcatgttgcagaagagcggcagagtcgc
tggaaagaagaagagcgaaaatcggacagaaaggaaagttcccggcgttacgaagaacca
gagtttaaagagagagtttcttcagcagataagcagagagagcaaccagatgcttcagaa
ggctcccggtccagggttcaggaaaatcttggacaccgtccctctgaagaaagagatgct
tctgatagaatgcatgatgacagcaagaggaagtctaagatacagaaaaaggccacaaag
aagaagaaagatgatgacagtggggtggaacggtacgctaatgaatcaacgactgaggaa
agccaggtcttttcacccaagaaaggtcaaaaaaagaaaaatgtagagaaaaagaggaag
agatccaagggtgattctgaagtttctgatgaagaaattgttccgcatcataaaaagaag
aagggaccaagaactccccctgtaacaaaagaagaattggttgaagcaccacctgagaaa
gctgtagcagaagttacccaaaaaagagaagatacaacatttagtgactggtcagatgaa
gatgttcccgaacgtggcgacattgttgttccagaaagaagcactgaggactcccataga
aaaagtcacaggacgaggggtgaaaaggtggaagcccctcatgttactatagacgatgga
ccacaccgtaaacctgtggatcagaaacgcagcagcagccttggtagcaatcggagccat
gcctccagcaggcttagatccccttccaatgagtcagctcatcgcagtggagatgaccag
actgcacggaagaggatcctgcacagtagctctagagacagggatagggacagggacaga
gagaagaaaagcctagaaatcactggggaacggaagtccagaattgatcagttgaaacga
ggcgaacccagtcgcagcacatcttcagatcgtcaagattcgagaagccacagttcaaga
agaagttctcctgaatcagatcgtcaggtccattccagatctgggtcctttgatagcagg
gaaaggcttcaggagcgagatcgacacgaacatgatcgagaacgagagagagagaggaga
gagggaagacagagagactgggaccgagatgttgacaaagactggccgaggagcagggaa
cgggagagactcagagaacgagagagggagagggaaaaaagacgggagctggacagagag
agagacagacaactacccgatactgctgaaagagagagagacagaactcttgacatctcc
tctcaaaaagaatcagcgaaacacagtgaaacgaaactggacagagatcacgaaaaggaa
tttgatggtgtttgccgggattcagcagcttcagagaaggaaagaacagacaaagattta
ggaccttcacaaggttttgaagatggaaatgaggccgaaaaggtagagagtttagaagga
gaagatgaagcaaagattgacgatgtacagtcactggggtctggtgctggagaatacgag
ccaatcagtgatgatgaactggatgaaattctggcaggtgatgctgaaaagcgggaggat
caacaggaggatgagaagatgcctggtaaaaatcctgtggatgttatagatgtggattgg
tccagtcttatgccaaagcagccaaaagagccacgggagcctggggctgcgctcttaaaa
ttcacgccaggtgccgttatgttgagagttggcatttccaagcgattggcaggaccggaa
ctcttcaccaaaattaaagagacttgccagagagtgttagaaaaaccaaaagatgcagaa
aacctttttgaacatgaactgggggccttgaacatggctgcacttctacgaaaagaagaa
agagcaggtcttctcagcgatctgggtccttgctgtaaagcgctgtgctttcgaagggat
tctgcaattcgtaagcagctaatgaagaatgaaaagggtgcaacaaaacaaacttacaca
aattctgcagcaatggacagtgacttgttacggttgagtctacggttattcaaacgaaag
actgtgtgccaagttcctgggcaggaaaagacagaggataataaaattccacaaccagct
ctccagcaagaagtgtgtgtgtcttga
DBGET
integrated database retrieval system
