Chroicocephalus ridibundus (black-headed gull): 134515708
Help
Entry
134515708 CDS
T10910
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134515708 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crid01007
]
134515708 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crid03016
]
134515708 (KARS1)
Enzymes [BR:
crid01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
134515708 (KARS1)
Amino acid related enzymes [BR:
crid01007
]
Aminoacyl-tRNA synthetase
Class II (A)
134515708 (KARS1)
Transfer RNA biogenesis [BR:
crid03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
134515708 (KARS1)
Prokaryotic type
Other AARSs
134515708 (KARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
134515708
NCBI-ProteinID:
XP_063191057
LinkDB
All DBs
Position
4:95546589..95555597
Genome browser
AA seq
600 aa
AA seq
DB search
MLSPAAARLRGWVWRAAPALRWRRALHDRSSELKRRLKAERKTAEKEAKQKEQSEKQSNK
LSVTSDSENNIAADEESLDPNQYYKIRSNAIQQLKGTNEDPYPHKFHVDISLTDFIEKYS
HLQPGDHLTDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEEEYFRIN
NKLRRGDIIGVEGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLD
LILNDYVRQKFITRAKIITYIRSFLDELGFLEIETPMMNVIPGGAVARPFITYHNELDMN
LYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEI
TEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTPPFRRISMVDDLEKVLGVKFPPAEC
FETEETRKFFDDLCAERNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLA
KWHRSRPGLTERFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENF
CMALEYGLPPTAGWGMGIDRFTMFLTDSNNIKEVLLFPAMKPEDNKKEAQPDPPAEGTSV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccctgccgccgcgcggctccgcggctgggtctggagggctgcgcccgccctc
cggtggcgccgggcacttcacgaccgaagcagtgagctgaagagacgtttaaaggctgag
agaaaaacagctgagaaagaggcaaagcagaaggagcaaagtgaaaagcaatcaaacaag
ctttctgtgacttctgactccgagaataatattgctgctgatgaagaaagcttggatccg
aaccaatattacaagatccgtagcaatgcaatccagcagctgaagggcaccaatgaagat
ccctatccccacaagttccatgtagacatatctctgacagattttatagagaagtacagt
cacctgcagccaggagatcacctgacagacattacagtgagagtggcaggtcgaatccat
gcaaaacgtgcctctggagggaagctgattttctatgatcttcgtggtgaaggagtcaag
ttgcaggtcatggcaaattccaggctctacaaatccgaggaagagtatttccgtattaac
aacaagctgcgtcgtggggacattattggtgtagaggggaatcctgggaaaacaaagaaa
ggggaactgagtattattccttatgaaataactctgttgtccccatgcctgcacatgttg
cctcatcttcactttggcctcaaagataaggaaactaggtatcgtcagagatacttggat
ttaattcttaatgattacgtgaggcagaaatttataacccgtgcgaagatcattacatat
attcggagctttctggatgagttgggcttccttgagattgaaactcctatgatgaatgta
attccaggtggagctgtggcaagaccttttatcacataccacaatgaactggatatgaat
ttatacatgagaattgctccagagctttaccataagatgttggtggttggaggcatggac
agagtatatgaaattgggcgtcagttccgtaatgaaggcattgatttgactcacaaccct
gagttcacaacttgtgaattctatatggcttatgcagactaccatgacttgatggaaatt
acagagaaattgctttcagggatggtgaaacatattactggaagttacaagatcacttac
catccagatggtcaagatggacaggcctatgagatagattttactcctcccttccgacga
attagcatggtggatgatctggaaaaggtcctaggagtgaaattcccaccagctgagtgt
tttgaaactgaagaaactcggaagttctttgatgacctttgtgcagagagaaatgttgag
tgtccacctcccaggacaacagccaggcttcttgacaaattagttggtgaattcctggaa
gtcacatgtatcaaccctacattcatttgcgatcacccacagatcatgagtcctctagcc
aaatggcatcgctctcgtccaggactaacagaacgtttcgaactctttgtaatgaagaag
gaagtgtgcaatgcatacacagaacttaatgatccttttcgtcagcggcagctttttgag
gatcaggccaaggcaaaagctgcaggtgatgatgaagccatgtttattgatgaaaacttc
tgtatggctctggagtacggccttcctcctacagccggctggggcatgggaattgatcgc
ttcaccatgttccttacagactccaataacatcaaggaggtgcttctcttccctgccatg
aagccggaggacaataagaaggaggcgcagcccgacccgcccgccgaaggcacctcagtg
tga
DBGET
integrated database retrieval system
