Chroicocephalus ridibundus (black-headed gull): 134516316
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Entry
134516316 CDS
T10910
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04010
MAPK signaling pathway
crid04210
Apoptosis
crid04218
Cellular senescence
crid04620
Toll-like receptor signaling pathway
crid04621
NOD-like receptor signaling pathway
crid04622
RIG-I-like receptor signaling pathway
crid04623
Cytosolic DNA-sensing pathway
crid04625
C-type lectin receptor signaling pathway
crid04920
Adipocytokine signaling pathway
crid05132
Salmonella infection
crid05164
Influenza A
crid05168
Herpes simplex virus 1 infection
Brite
Transcription factors [BR:
crid03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
134516316 (NFKB1)
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Other DBs
NCBI-GeneID:
134516316
NCBI-ProteinID:
XP_063192432
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Position
5:complement(28263750..28323709)
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AA seq
996 aa
AA seq
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MAGEDSYIMGVSDPQMFAMEQFMGMNALFNNTNYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
DYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGSFTRRLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
CSLEFSLLVSVSMPDKEEVQRKRQKLMPNFSDGYGGGSGAGGGGMYGGGGGGAGSGFSYP
SYGYSAFGGMHFHPGTTKSNAGMKHGLSNSTAEQDGKSSDKQSDKWDMKRDVKVVTTERN
ECRTSGDEEEEEDASSCKTEVNEADHRWQDGLFLEKAMQLAKRHCNALFDYAVTGDVKML
LAVQRHLTVVQDDNGDNVLHLAIIHLRTELVKNLLEVIPDFNYNDIINMRNDLYQTPLHL
AVITKQAEVVEDLLKAGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHKKISPMVDLSN
GEGLSAIHMVVMANSMSCLKQLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEG
DADVDSTTYDGTTPLHIAAGRGSTKLAAVLKAAGANPHVENFEPLFEVDDMKGDEDDDEG
IVPGTTPLDMAANCEVYDILNGKPYESAVVSEDILTQGHLRQLNESSKMQLYKLLELPDP
NKNWSTLAQKLGLGILNNAFRLSPSPSKTLLDNYEVSGGTVQELIAALRQMDHTEAIEII
QKALSISQSPSRLEENTSKALPSSPPPTFANGETGELYNSKFQDNESTCDSGVETSFRKL
SFTYSDSLNSKPSVTLSKMILGYGHESSVQSSYIAN
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaagattcctatattatgggagtgtctgatccccaaatgtttgcaatggag
cagttcatgggaatgaatgcattatttaacaatacaaattacatcacttcagacttacca
ctacgaacagcagatggaccatatcttcaaatcatagaacagccaaaacagaggggtttt
cgtttccgatacgtgtgcgaagggccttcacatggtggacttcctggtgcttctagtgaa
aagaacaaaaaatcataccctcaggtcaaaatctgcaattatgttggacctgcaaaagta
atcgtccagttagttactaatgggaaatacgtccacttacacgctcacagtttggtgggt
aaattttgtgaagatggagtatgcacggttaacgcaggacctaaagatatggttgtaggg
tttgcgaatcttggaatacttcatgtcacaaagaagaaagtgtttgaaactctggaaaca
cgcatgatagatgcttgcaaaaaaggatacaacccgggactcttggtgcatcctgaactt
gactatctgcaggcagaaggatgtggagacagacagctaactgaacgtgaaagagaaatt
attcgtcaggcagcagtacagcagactaaagaaatggatctcagtgtggtgcgtctgatg
tttacagcttttctccctgacagtaacggtagtttcacaaggagacttgatcctgttata
tcagatgcaatatatgacagcaaagctcccaatgcctccaacttaaaaatcgtaagaatg
gacagaacagcagggtgcgtaacaggaggggaagagatttaccttctctgtgataaggtt
cagaaagatgatattcaaatacgtttctatgaagaggatgagaacggtggtatgtgggaa
ggctttggagacttttctcctacagatgtacatagacagtttgctattgtgttcaaaaca
cccaagtatcgagatgtcaatatcacaaagccggcatctgtatttgtacaattgcgtcgg
aaatctgatctagaaacaagcgaaccgaagccttttctctactatccggaaatcaaagat
tgctctctagagttttctctcctcgtcagtgtgagtatgcctgataaagaagaagtgcaa
agaaaacgacagaagctcatgccaaacttctctgatggctatggtggaggcagtggtgca
ggaggcggtggcatgtatggagggggaggtggcggtgctggctctgggttcagttaccct
tcatatggatactctgcttttggagggatgcatttccaccctggcacaacaaagtccaat
gctggaatgaaacatggactatcaaatagcacagctgaacaagatgggaagagctctgat
aaacaaagtgacaaatgggacatgaaacgtgatgtgaaagtggtaactacggagaggaac
gagtgcagaacctctggtgatgaggaggaggaggaggatgcttcttcctgtaaaactgaa
gtaaatgaagcagatcacaggtggcaagatggtctgttcctggagaaggccatgcagctt
gccaagcgtcactgcaatgctctctttgattatgctgtaactggggacgtgaagatgctg
ttggctgttcagcgccatctcactgttgtccaggatgataatggagacaatgtccttcat
ttagcaattatccatcttcgtactgagctggtgaaaaacctcttggaagtgatacctgat
ttcaattataatgacatcattaacatgagaaacgacctttatcagacccccttgcacctg
gcagtaatcacaaagcaggcagaggtggtagaagacctgctgaaggctggagcagatgtc
agccttctggatcgccatggtaattctgtcttacatttagctgctactgaaggagacgac
aagattttgagtctactcctcaagcataagaagatatctccaatggtcgacctttccaat
ggtgaaggtctcagtgcaattcacatggtggtgatggcaaatagcatgtcctgcctcaaa
cagctgatcgctgctggagttaatgtcaatgctcaggaacaaaaatctggacgaactgca
ttgcatttagctgttgaacaagagaacatccctttggccggttgccttttgcttgagggt
gatgcagatgtggacagcactacatatgatgggacaactcctcttcacatagcagctgga
aggggctctacgaaattggcagcagttctcaaagcagcaggtgcaaatcctcatgttgag
aactttgagccgttgtttgaggtagacgatatgaaaggtgatgaagatgatgatgaaggg
attgtgcctggaacgacaccactggatatggcagccaactgtgaggtgtatgacatacta
aacggcaaaccctacgagtcagcagtggtttcggaggacatactgacacaaggacatttg
agacagctgaatgaaagttccaagatgcagctttacaaactattggaattgcccgatcca
aacaaaaactggtccactctagcgcaaaaactgggtcttggcatacttaataatgccttc
aggttgagcccttccccatcgaaaactctgctagataactatgaggtttctggtggtaca
gttcaagagttgattgctgctttgaggcagatggatcacacagaagccattgaaatcatt
cagaaagcactatccatctcacaaagcccgtctcgcctggaggaaaatacgtcaaaagct
cttccgtcatcaccaccacccacctttgcaaatggagagacaggcgagctttataatagc
aaatttcaagacaacgaaagcacgtgtgacagtggtgtggagacctccttccgcaaactg
agctttacttattcagactctctgaacagcaagccatcagtaacacttagcaaaatgatc
ctgggctatggacatgaaagttcagtgcaaagcagttatatagctaactag
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