Chroicocephalus ridibundus (black-headed gull): 134516359
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Entry
134516359 CDS
T10910
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134516359 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134516359 (FIP1L1)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134516359 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
134516359
NCBI-ProteinID:
XP_063192532
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Position
5:71630025..71675134
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AA seq
552 aa
AA seq
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MSTGEVERLSADLGGAAGDEEEEWLYGDENEAERPEEEKASAPPPPGSEEEAAENGVVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYSYGAAPVNLNIKTGGRAYGSSGAAKI
KGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIR
MGLEILPVTSTTNKITAEDKSVEVRPSAEILDGRYHLFKVQQGRTGNLEKELAVQSTKAD
FTSPPALFKSGIPTNRRLSGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDNF
TKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFAPPPGGPPPSL
IPTIESGHSSGYDGRSVRAFSYGSVTFPHLAGSAPSWSSLMDTSKQWDYYARRDKDRERE
RERSRDRDRDRDRDRDRERTRDRERDRDHSPTPSVFNSDEERYRYRDYAERGYDRHRTSR
EKEDRHRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPA
PEQENTEAAPAE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccggcgaggtggagcggctgtcggcggacctcggcggggctgccggcgacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagagacctgaggaagaaaaagct
agtgctccacccccacctggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacg
aaggtggcagaggctgaggatgacagcgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggggatattaaaacaggagctccacagtatagttatggagcggcacct
gtgaatctcaatattaagacaggaggacgagcttatggatcttctggtgctgcaaaaatt
aaaggggtggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagat
ttagattcttttgaagataaaccttggagaaagccaggggctgatctctctgattatttc
aactatgggttcaacgaagatacctggaaagcttactgtgaaaaacaaaagagaatacga
atgggtcttgaaattttaccagttacctcaaccacaaataaaattacggctgaagacaag
tctgtggaagtaagacccagtgcagagattctcgatggcagataccatctttttaaggta
cagcagggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaagctgat
ttcacatctcctcctgccttattcaaatcaggaattccaacaaacaggcgattatctggc
acaatagatgtgattggacagaccatcactatcagcagggttgaaggacgacggcgtgct
aatgaaaacagcaacatacaggttctttcagaacgatctaatcctgaagtagacaatttt
accaagccacctccatttttccctccaggagctccacctacccaccttccaccacctcct
ttcctcccaccccctccaactgtcagtactgctccacctctgattcccccaccaggtata
ccaataacagtgccaccaccaggctttgcaccaccacctggcggtcctccaccttccctc
atacccacaatagaaagtggacattcttctggctatgatggtcgttctgttcgtgcattt
tcgtatggcagtgtcacctttccgcaccttgcaggttctgctccttcgtggtctagtctt
atggacaccagcaaacagtgggattactatgcacgaagagacaaggatagggaacgtgag
agagagcgatccagagatcgggatcgcgaccgggaccgagacagagatcgagaacgtacc
agagacagagaaagggaccgagatcacagtccaactccaagtgtcttcaacagtgacgaa
gaacgatacagatacagagactatgcagaaagaggctatgaccgccatagaacaagtaga
gagaaagaagacagacacagagacaggagacacagagagaaagaagagactagacacaag
tcatctcgaagtaacagcagacgtcgtcacgacagtgaagaaggggacagccacagaagg
cacaaacacaaaaaatccaaaagaagcaaagaaggaaaagaagccagcggtgaacctgct
cctgaacaggaaaacactgaagctgcccccgcggaatag
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