KEGG   Chroicocephalus ridibundus (black-headed gull): 134516364
Entry
134516364         CDS       T10910                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:crid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crid03400]
    134516364 (HELQ)
Enzymes [BR:crid01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     134516364 (HELQ)
DNA repair and recombination proteins [BR:crid03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    134516364 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DUF4332 DNA_pol_lambd_f RIMB1_N
Other DBs
NCBI-GeneID: 134516364
NCBI-ProteinID: XP_063192538
LinkDB
Position
5
AA seq 1053 aa
MAEPALAVRRKSRPSSVRKRSRVPVQPSAVCSPVARKRPSAGDEGPPAETPCSNDSEEDM
FGDFDSFYGNDSLLAQVDDIEHKYLQDKNTDIKGPGDTVLGNLQSGIQQQKQDNFSTSEN
KTVLKADKEDGFQMNENDPVNSNQELTQLVLDDLPSSQLLYFEKIDELSSGSKIFPVSER
RNKCVNSSLDKIRSPSSFCPDAEHRTRPNDFSSDSKRDFFKTESLKDHLKSAMTGNAKAQ
TLQVSKTKQLKEAVLSEEICVARKTIESSSVDIGPFYGLPSKVKDLFRQFRGIETLYEWQ
HDCLMLESLQQRKNLIYSLPTSGGKTLVAEIIILQELLCRQKDVLMILPYVAIVQEKVRG
LSSFGIELGFLVEEYAGSKGRFPPIKRRIKKSLYIATIEKGHGLVNSLIETERIDDLGLV
VVDELHMLGEGSRGATLEITLAKILHTSKNTQIIGMSATLNNVGDLQKFLQAEYYTNNFR
PVELKEYVKIRDTIYAVDSKTENGFTFSRLLNFKYSSNLEKADPDHIIALVTEVIPKYSC
LIFCPTKKNCENVASMVCKYLKKEFKAHREKEKQDLIKNLKNIGNGSVCPVLMQTIPFGI
AYHHSGLTNDERKSIEEAYSTGVLCLLACTATLAAGVNLPARRVILRAPYVANDFLRKNQ
YKQMIGRAGRAGIDSAGESILIAQEKDKHLVQDLVNSPLENCYSNLLLELTKGMQSLLLS
LVGLKIAVTQEEVDNFMCSTLLGVQQQLLSKEKSLSEITKDGLENLIEKGLLKGRISEKD
HSSKCTLTITPLGKATYKGSIDLAYCNLLYRELKKGLEGLILESNLHLLYLATPYDMTSN
CSPDWMIYLRQFNQLSAAEQKVADIVGVPESFITKKASGQAIRKNVDSAVVNRLYLSFVL
YTLLKETNIWSVSEKFNMSRGYVQNLLNSAASFTSCILHFCEELEEFWVYKALLTELTKQ
LTYCVKAELIPLMEVAGVLEARAKQLYNAGYKTLAHLANANPETLVKMIEHLSLRQAKQI
VSSAKMLLSEKAEALQEEVEELLKVPTDIPGTY
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggccgagcccgctctggcggtacggaggaagagccgccccagctctgtccgcaagcgg
agccgggtcccggtgcagcccagcgccgtctgctcgccggtggctcgcaagagaccgagc
gccggtgacgaggggcccccggcggagaccccgtgcagcaatgatagtgaagaagacatg
tttggcgactttgacagcttttatggaaatgattctttgctagctcaagttgatgatata
gagcacaaatacctgcaggataaaaacacggatattaaaggacctggagacactgtactt
gggaatcttcagtcaggaattcagcagcaaaagcaagataatttttctacgtcagaaaat
aagaccgtccttaaagctgacaaagaggatggtttccaaatgaatgaaaatgacccagtg
aatagcaatcaagagctgactcaattggttttagatgatttgccatcatcacaacttttg
tattttgagaaaatagatgaactttcttctggttctaaaatatttccagtctcagaaagg
aggaataaatgtgtgaattcttccttggacaaaatcaggagtccatcatccttttgtcct
gatgctgaacacaggaccagacctaatgacttttcctcagactctaagcgtgatttcttt
aaaactgagagtcttaaagatcatctgaaaagcgctatgactggaaacgccaaagcccag
actctgcaggtctctaagaccaagcaacttaaagaagcggttttatctgaagagatttgt
gttgctaggaaaactattgaatcttcttctgttgatataggccctttttatggattacct
agcaaagttaaagatctgttcagacagtttcgagggattgaaacactgtatgaatggcag
catgattgcttaatgttagaatccttacagcaaagaaagaatttaatatactcattgcca
accagtggtggaaaaacacttgtagctgaaataataattctccaagaattactctgcagg
cagaaagatgttctgatgatcctgccatatgttgccattgtccaagaaaaggttaggggt
ttatcgagttttgggatagaattgggtttcctggttgaagaatacgcaggaagtaaagga
agatttccaccgattaagaggagaataaaaaagtctctttatattgctactatagaaaaa
ggacatggtctagtgaattccttaattgaaacagaaagaattgatgacctcggtctggtt
gtagtagatgagttgcatatgcttggtgaaggaagtcgtggagcaacactggaaattact
cttgcaaaaattcttcacactagtaaaaacacacaaatcattggaatgagcgcaacttta
aataatgttggagacctgcagaagttcctgcaagcggagtactatactaataattttaga
ccggtagaattaaaagaatacgtaaagatacgagacaccatttatgcagttgacagcaaa
acagaaaatggctttactttttcacgtctccttaatttcaagtattctagtaatctggag
aaagcagaccctgaccacatcattgcactggttactgaagttattcctaaatattcctgc
ctaatcttctgtcccactaaaaagaactgtgaaaatgtggcttcaatggtgtgcaagtac
ctcaagaaagaatttaaagctcacagggagaaagagaaacaagatctcatcaagaatcta
aagaatattggaaatggcagcgtctgtcctgttctgatgcaaacaatcccttttggtatt
gcctatcaccatagcggccttacaaacgatgaaagaaaaagtatagaggaagcatattct
acaggcgtcctgtgtctacttgcttgcacagctactttagctgctggagtcaacctgcca
gctagaagggttattctaagagctccttatgtcgccaatgacttcctgaggaagaaccag
tataaacaaatgattggcagagctggtcgagctggtattgacagtgctggagaaagtatt
ctcatagcgcaagaaaaagacaaacacttggttcaggatttagttaacagtcctttggag
aactgttacagcaatcttctgctggagctgaccaagggaatgcagagcctgttgttgtct
ttggttggactgaagatagcagttacccaggaggaagtcgacaattttatgtgcagtact
ttgctgggtgttcagcagcagctgctgtctaaagagaagagcctctcagagataactaaa
gatggtctagaaaatctcatagaaaaaggacttctaaaaggaagaatatctgagaaggac
cacagttccaaatgtacgctaacaatcacaccattgggtaaagctacatacaaagggtct
atagacttggcatactgcaatcttctttacagagaattgaagaaaggtttggaagggctg
attcttgagagcaatcttcatcttctatatctggcaactccttatgatatgacttctaac
tgtagcccagattggatgatatacttaagacagttcaaccagttaagtgcagcagagcaa
aaagtagcggatattgtgggagtacccgaaagctttattacaaaaaaggcttctggtcaa
gccatcagaaagaacgtggacagtgctgtggtaaacaggctctacctgtcgtttgtcctt
tataccctactgaaagagaccaatatatggagtgtttcagagaaatttaatatgtcccga
ggatatgtgcaaaatctcctcaattctgctgcctcattcacctcctgcattctacacttc
tgtgaggaattggaagaattctgggtttataaagccttgctgacagaacttaccaagcag
ttgacgtactgcgttaaggcagaactcatccctctgatggaggtagcaggggttctagag
gcacgagcaaaacagctttataacgcggggtacaaaactttagcgcacttggctaatgca
aatccagaaactctggtcaaaatgattgagcacttgtcactacgtcaagccaaacagatc
gtttcatctgcaaagatgctgctgagtgaaaaagctgaggctttacaagaagaagttgaa
gaactcttaaaggtgcctacagatatcccagggacctactga

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