Chroicocephalus ridibundus (black-headed gull): 134516397
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Entry
134516397 CDS
T10910
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134516397 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134516397 (NUP54)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134516397 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
134516397
NCBI-ProteinID:
XP_063192602
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All DBs
Position
5:7053159..7067851
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AA seq
554 aa
AA seq
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MAFNFGATAGAGAANPTGFGGLETTNSTASGFNFGGFGLTANPAVNFNIGNFGVSTTSTP
PFNFGNSLASAGAFGGFGTTTTTAAPAFSFSAPTNTGTSGLFGATQNKGFGFGTSFGTGT
GTGLGSGLGTGLGFGCFGTQQQQTTLGGGLFSQPAQTPAQSNQLINTASALSAPTLLGDE
RDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNNKDEDGLVVL
VFNRKETDIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVIIYVVERSPNGTS
RRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGVDPIIWEQAK
VDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTTTMAKIA
QYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFKGRLNE
LMSQIRMQNHFGTVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLEDIKLIEH
GLNESIPIRGGVFS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacttcggggcgacggcgggcgccggtgccgccaaccccaccggatttggt
gggcttgaaactacaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcctgcagtgaattttaatattgggaatttcggtgtttccactacctcaactcca
ccattcaattttggtaacagtctggcaagtgcaggtgcttttggaggatttgggacaact
accaccactgcggcaccagcattcagtttttctgctcccaccaatacaggcaccagcggg
ctctttggtgctacccagaacaaaggctttggctttggtactagttttggcacaggaact
ggaactggcttgggtagtgggttgggaacggggctgggctttggatgctttggtacccag
cagcaacagaccacattaggaggcggcttgttcagccagcctgctcagacacctgcccag
tcgaaccagctcatcaatacagccagtgccctctcggctccgacactcttaggagatgag
agagatgctattttggcaaaatggaaccagcttcaggccttctggggaacaggcaaaggg
tacttcaacaataacattgccccagtggagttcacgcaggaaaaccccttttgcaggttt
aaggctgtgggttacagtttaatgcccaacaacaaagatgaagatggcctcgtggtcttg
gtctttaacagaaaagaaacagatattcgaagccagcagcagcagcttgtagaatcgcta
cacaaaattctggggggaaaccagaccctcactgtcaacgtagaaggtgttaaaacgatg
ccagatgaccagacagaagtgatcatttacgttgttgagcgctcgcccaatggcacttca
aggagagttcccgcaacgaccctctacgcccactttgaacaagccaacataaaatcgtcc
ttgcagcagctgggggtcagcctctccatggccaggacagagctgtccccagcacaagtc
aaacagctcctgcagaaccctcctgccggtgtcgatcctattatatgggaacaagctaaa
gttgacaatcctgatcctgacaagcttattcctgtgccaatggtgggtttcaaggaactg
ttgagaagattgaaggtccaagatcagatgaccaaacagcatcaaactcgattagatata
atatcagaagatatcagtgagctgcagaaaaaccaaacgacaactatggcaaaaattgcg
cagtacaaaaggaaactgatggcgctttctcacagaacattacaggtgttaataaagcag
gagatccaaaggaaaagtggttatgccattcaagcagatgaagagcagcttcgtgtacag
ttagatacaattcagtgtgaacttaacgcacctacacagttcaagggcagactgaatgag
ctcatgtcccagatcaggatgcaaaaccactttggaacagtgcgggctgaagagcgctat
tacatagatgcagacctcttaagggaaatcaaacaacatctgaagcagcagcaagaaggc
ctgagtcacctaattagcattataaaggatgatttggaggacatcaaacttatagaacat
gggctgaacgagagcatccccatcagaggaggagtcttcagttga
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