Chroicocephalus ridibundus (black-headed gull): 134516707
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Entry
134516707 CDS
T10910
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134516707 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134516707 (HERC3)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134516707 (HERC3)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
HECT type E3
134516707 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
134516707
NCBI-ProteinID:
XP_063193280
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All DBs
Position
5:complement(33752115..33807001)
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AA seq
1050 aa
AA seq
DB search
MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSEGQLGLTT
IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQISGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLD
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHIEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDVEETFCLNFTICRESYGVTEQKNLVEDGDKILVRKDNREEFVEAYVNYIFNL
SIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIVIQSTASGEQYLPVAHTCYN
LLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggatactcgtcttttggacaacctgggataggtagcaacctccaggtc
atcattcctgaaccgcaggtgtatggattcattcatgacagaaatgtcaaggaggtggca
tgtggaggaaaccactctgtgttcctgttggaagatggggaagtgtatacctgtggcttg
aacaccaaaggccaactggggcatgactgtgaaggaagcaagccagagcaaattggggcc
ctggccgggcagcacatcgtgcatgtggcctgcggagagtctcacagcgtggcactcagc
gaccagggacagctcttctcctggggcgctggcagcgagggacagttgggtctcactact
atagaagacgcagtgacggtaccaaggttgataaagaaattgaaccaacagacgatactg
caggtttcctgtggaaactggcattgcctggctttggcagcagatggccagttcttcaca
tggggccagaacagctatggtcaactgggcttgggtaaagaatgtccctcccaagccagt
ccacaacgtgtcaagtctcttgatgggatccctttggctcaggttgctgcaggtggagcc
cacagttttgccctctctctctcaggagctgtgtttggctgggggaagaacagctcagga
caactgggattaagtgatgaacgagaccgagaatccccttgtcatgtgaagctgttgcgg
tctcagaaggttgtttacatcagctgtggagaggaacacacagcagtcctgacaaagagt
ggaggggtgttcacgttcggtgcaggttcctgcgggcaactgggacatgactccatgaat
gatgaagtgaacccccgaagagttcttgagctaatgggcagtgaagtatcccagattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacagggcacacttgcaatgttaagtgtccctctcct
gtcaagggtcactgggcagctcacaatgggcaaatctcagggaaacctgatgcctgtaaa
tatcacattgttaaacatatcttctcaggaggagaccaaacatttgtgctctgctccaaa
tatgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatactgtcctcagctgcctgctggaatggaagcttc
ttggagaagaaaattgatgaacattttaaaaccagtccgaagatcccagggattgatctg
aactccaccagagtgctgtttgagaagctgatgaactctcagcactccattctcctagat
cagatactgaagagctttgaaagttttttgattcctcagctgtccagctcaccaccagat
gtcgaggcaatgaggatctatctgattctccctgaattcccaccctttcaagactccaag
tattatatcacgttaacgcttcctctagcaatggctattctgcgcctagataccaacccc
agtaaagttctcgataactggtggtctcaagtgtgcccaagatatttcctcagacttgtg
gacctctataaaggcgcagtggtttacctcctcagtggaagaaagacactgttgatccca
gtcctgttcagtagctacattacagctgctctcagacttctggagaaactccacaaggta
aatcagaaggttaaacacatagaatatgataagttttatatccctgagatctccagcttg
gtggacattcaggaggattatctcatgtggttcttacatcaggctggaatgaaagtaaga
ccatctatcatgcaggatgctgtgacgctctgttcttatcctttcatcttcgatgctcag
gctaagaccaagatgttacagacagatgcagaactacagatgcaggttgcaataaatggt
gcaaatttgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagccct
ttcctggtacttcatgttcgcaggagtaacttagtcggtgatgctttaagggagttgagc
atccattcagatattgatttgaaaaagcctcttaaagtcatctttgatggtgaggaagct
gttgatgctggaggagtgacaaaggaatttttcctcctgttgttaaaagaactcctcaac
cccatctatggcatgttcacttactacccagagtcaaacctgctgtggttttcagacacg
tgttttgtagagcacaactggtttcacttgattggcatcatctgtggtcttgcaatatac
aacttcacagtggtagaccttcactttcccttggctttgtacaaaaaactcttgaatgtg
aagccctgcctagaggatttgaaggagctatcccctacggaaggaaggagtcttcagcaa
cttttagattaccctggggaagatgtagaagagacattctgcttgaattttacaatctgc
agggagagctatggtgtgacagagcagaagaacctggttgaagatggagataaaattctg
gtgcggaaagacaacagggaagaatttgttgaagcctacgtaaattacatcttcaacctc
tccatccatgagtggtacacggctttttccactggcttcctgaaagtgtgtggtgggaaa
gtcctggaactcttccagcccacagagctcagggccatgatagttggaaacagtaactac
aactgggaggaattggaggagagcgctgtctataagggagactacactgcgacacaccca
actgtgagaatgttttgggaaacctttcatgcttttcccttggaaaagaagaagaaattt
ctcttgtttctgacgggcagtgaccgcattcccatttacggcatgtccagcctgcgcatc
gtcatccagtccaccgccagcggggagcagtacctgcccgtggcacacacctgctacaat
ctcctggacctgcccaagtacagcagcaaggagatcctcagcgcccggctggtgcaagcc
atcgaccactacgagggctttagcttggcttga
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integrated database retrieval system
