Chroicocephalus ridibundus (black-headed gull): 134516742
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Entry
134516742 CDS
T10910
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03020
RNA polymerase
crid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134516742 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
134516742 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134516742 (POLR2B)
03400 DNA repair and recombination proteins [BR:
crid03400
]
134516742 (POLR2B)
Enzymes [BR:
crid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134516742 (POLR2B)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
134516742 (POLR2B)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
134516742 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
134516742
NCBI-ProteinID:
XP_063193353
LinkDB
All DBs
Position
5:complement(33854037..33873872)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgacgaagatgatgacgagatcacgcccgac
ttgtggcaagaagcctgctggatcgttattagttcctattttgatgaaaagggtttagtc
aggcaacagttggattcttttgatgaatttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgccacaggagaagtggaagag
ccgccccggtacctgttgaagtttgaacaaatctatctctccaaacctacacattgggaa
agagatggagcaccctcgcctatgatgcccaatgaagccagactgagaaaccttacgtat
tcagcccccttgtatgtggatataactaaaacagttattaaagaaggggaggatcagtta
cagacacagcatcagaaaacttttataggaaaaattcctattatgttacgttcaacatac
tgtttattgaacggcttaactgaccgtgatctttgtgaactgaatgaatgcccgctcgat
cctggtggctactttatcattaatggatcagaaaaggttcttattgctcaagagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtagatcttgtctggaaaattcctctcgaccaacgagtactatatgggttagcatgctg
gccagaggtgggcagggtgcgaagaagagtgctattggtcagcgcattgtagcaactttg
ccgtatatcaaacaagaagtccccatcataattgtctttcgtgcactaggctttgtgtct
gacagggacattttagagcacatcatatatgattttgaagatccagaaatgatggaaatg
gtcaaaccttctctggatgaagcgtttgtcattcaggagcaaaatgtggctctaaacttc
attggatcaagaggtgcaaagccaggtgtcaccaaagaaaagagaatcaagtacgctaaa
gaagtcttgcagaaagaaatgctcccgcatgttggtgtcagtgacttctgtgaaacaaaa
aaggcctattttctagggtatatggttcatagattgttgctggcagcactgggaagaaga
gagcttgatgacagagatcattatggcaacaaaagactggatcttgctgggccactgttg
gctttcctgttcagaggaatgtttaagaatttgctgaaggaagtgagaatatatgcacaa
aagtttattgacagagggaaagatttcaacttggaactggcaattaaaacaagaattatt
tcagatggtttgaagtattcattggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgtctgacttttgcatctacactttcc
catctgagacgtctgaattctccaattggtagagatggtaaactagcaaagcccaggcag
ctgcacaatacactgtggggaatggtttgccctgctgagactccagagggtcatgcagta
ggacttgtgaagaacttggccctcatggcttacatttctgtggggtctcagccatccccc
attttggaattcttggaagagtggagtatggaaaacctggaagaaatatctccagcagca
atagctgatgctaccaagatctttgttaatggctgctgggtaggaatacacaaagatcca
gagcagctcatgaataccctaaggaagctccgtcgtcagatggacatcatcgtgtcagag
gtctcaatgattagagatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgtcgaccccttttaattgtggaaaaacagaagttgctgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtataacaattacagttggcaggatctcgtggccagtggt
gtagtagagtacattgatacactggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatattgctcaacatacacgcactgtgagattcaccca
tctatgatcctgggagtatgtgcatccattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaaacaggctatgggagtttacattaccaacttt
catgtccgtatggatacgctggcacatgtgttgtattatcctcagaagccccttgtaaca
acacggtccatggagtacttgcgatttagagagttaccagcaggtatcaactcgattgta
gccattgcgtcatacacaggctataaccaggaagactctgtcatcatgaaccgttctgct
gttgacagaggctttttcagatctgtgttctatcgctcatacaaagagcaagagtctaaa
aaaggttatgaccaagaggaagtttttgaaaagcctacacgtgaaacttgccaaggtatg
agacatgcaatctatgacaaacttgatgatgatggtttgatagcacctggggttcgtgtg
tctggggatgatgtcatcattggcaaaacagtgacactgccagaaaacgaagatgaactg
gaaagcactaacagacgtttcacaaagagagactgtagcacttttttgcgaactagcgag
actggtattgtagatcaggtcatggtaacccttaaccaggaaggatacaagttctgcaag
attagggtacggtctgtaagaatcccacaaattggagataaatttgccagcagacatggt
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacctgtgaagga
atcacacctgatataattatcaacccccatgccatcccttcccgtatgaccattggtcac
ttgattgagtgccttcaagggaaggtgtctgcaaacaagggagaaattggtgatgctaca
ccttttaatgatgctgtcaatgtgcagaagatttccaatctcttatcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcacag
atcttcattggtcctacatattatcagcggttgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggccaatccagatacttaacagacagcccatggaaggtagatctcgt
gatggtggccttcgttttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccgtaccaagtccatgtctgtaac
ctctgtggcatcatggcgattgcaaacacaaggactcacacctatgaatgccggggatgc
cgtaataaaactcagatatctttggttcggatgccctatgcctgcaaactcctcttccaa
gaactgatgtctatgagtattgcacctcgtatgatgagtgtgtag
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integrated database retrieval system
