Chroicocephalus ridibundus (black-headed gull): 134516753
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Entry
134516753 CDS
T10910
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
134516753 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crid01009
]
134516753 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134516753 (PCDH7)
Protein phosphatases and associated proteins [BR:
crid01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134516753 (PCDH7)
Cell adhesion molecules [BR:
crid04515
]
Cadherins
Protocadherins
134516753 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
LYRIC
KIAA1549
TMEM154
CesT
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
134516753
NCBI-ProteinID:
XP_063193381
LinkDB
All DBs
Position
5:64197590..64479309
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AA seq
1266 aa
AA seq
DB search
MRTLLGFVHCCCCCFCFLLLLPPPLWVSLAAAKQLLRYRLAEEGPADIRIGNVASDLGIV
TGSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSVIG
PSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIE
RYELLQEPGGDGGRRAGGGGGGGGGGGGGGGGSASAASESALYPGGSKRRQEADAAARSS
VFELQVADTLDGEKQPQLIVKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVN
DNSPRFEKSVYEADLAENSSPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDE
TSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGR
IPLRDGVASVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQN
KRKYFLHTSAPLDYEAVRDYNVVIVAVDSGSPSLSSNNSLLVRVGDTNDNPPVFSQAVLE
VSFPENNLPGERVATVVATDADSGKNAELTYSLEASPLSSESPGGIFSIDPDSGDVSVQA
VLDREQRDTYEFQVTARDKGVPSLQGSTTVVVRVADRNDNEPRFMQDVFTFYVKENLQPN
SPVGMVTVMDFDKGRNAELSLSIQPGDHDQATGIFSIENDTGTIFSTVSFDREQQTSYTF
KVKAVDGGEPPRSATATVSLFVMDENDNAPTVTFPSNSSYTVLPPSSNMRTVVATVVATD
ADTGLNADLNYSIVGGNPFKLFEIDPASGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQS
TTALLHVFVNESLSNATVVEGQVARSLHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMT
VILLILVVVMARYCRSKSKHGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKGKQPLYSS
IVTVEASKPNGQRYDSVNEKLSDSPGMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQ
SPTAGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQASSKYSKQPFRRVTFSVVSQ
PQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMEN
DSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLSTFMPVDERGSQEKL
ANGEASLMGDRNRNLLNKKLTSSYETFSAASFSKNEEGNPEDIPLTQTGEYKPSPVNTLT
RREVYL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgcggactctccttggctttgtgcattgctgctgctgctgcttctgcttcttgctcctc
ctgcctccgccgctctgggtcagcctggcagcggccaagcagctcctgaggtaccggctg
gccgaggagggacccgccgacatccgcatcggcaacgtggcttccgacctgggaatcgtg
acgggctccggagaggtgacattcagcctggaatcgggctccgactatctcaagatcgat
aacatgaccggggagctgagcaccacggagcggcgcatcgaccgcgagaagctgccgcag
tgccagatgatcttcgacgagaacgagtgcttcctggacttcgaggtgtcggtcatcggc
ccctcgcagagctgggtggacctcttcgagggccgggtcatcatcctggacatcaacgac
aacacccccaccttcccgtcccctgtcctcacgctgaccgtggaggagaaccggcccgtg
gggaccctctacctgctccccaccgccaccgacagggacttcggccgcaacggcatcgag
cgctacgagctgctgcaggagcccggcggggacggcggccgccgcgctggcgggggcggc
ggcggcggcggcggcggcggcggcggcgggggaggctcggcctcggcggcctccgagagc
gccctctaccccggcggcagcaagcggcggcaggaggcggacgcggcggcgcggagcagc
gtcttcgagctgcaggtggccgacaccctcgacggggagaagcagccgcagctgatcgtc
aaaggggcgctggaccgggagcagcgggactcctacgagctcagtctccgcgtgcgggac
ggcggcgacccggcgcgctcctcgcaggctatcctgagggtgctcatcaccgacgtgaac
gacaacagcccccgcttcgaaaagagcgtctacgaggcagacctggcggagaacagcagc
cccggcacccccatcctgcagctgcgagccgccgacctggacgtgggggtgaacgggcag
atcgagtacgtcttcggggcggccaccgagtccgtcaggcgcctgctgcggctggatgag
acctctggctggctcagcgtcttgcaccgcatcgaccgggaggaggtgaaccagcttcgc
ttcaccgtcatggcccgagatcggggccagccccccaagacagacaaggccacggtcgtg
ctgaacatccgtgatgagaatgacaacgtgcccaccatcgacatccggaaaattgggcgc
atcccactgcgggatggggtggctagtgtggccgaggacgtgctggtggatacccccatc
gctctggtgcaggtgtcggaccgggaccaaggtgaaaacggcgtggtgacctgcaccgtg
gtgggcgacgtgcccttccagctcaagccggccagcgagggtgaaggggagccacagaac
aagcgcaagtatttcctccacacctcagcccctctggactatgaggctgtccgtgactac
aacgtggtgattgtggctgtggactcgggcagccccagcttgtccagcaacaactccttg
ctggtgcgggtcggggacactaacgacaaccctcccgtgttcagccaggccgtgctggag
gtctccttcccagagaacaacttgcctggcgagagggtggccacagtggtcgccacggat
gcagacagtggcaagaatgctgagctcacctactccctggaggcctcacccctctcctca
gagtcgccaggcggcatcttcagcatcgaccctgactccggggacgtgtcggtgcaggcg
gtgctggaccgtgagcaacgtgacacctatgagttccaggtaacggcccgggacaagggg
gtcccatcgctgcagggctccaccacagtggtggtgcgggtggcagatcgcaacgacaat
gagccacgcttcatgcaggatgtgttcactttttacgtgaaggagaacctgcagcccaac
agccccgtgggcatggtgactgtgatggacttcgacaagggccgcaatgctgagctcagc
ctctccatccagcccggtgatcacgaccaggcaactggtatcttctccatcgagaacgac
accggaaccattttttccaccgtctcttttgaccgtgagcaacagaccagctacactttt
aaggtgaaggcagtggatggaggtgagccaccacggtctgccactgccaccgtgtccctc
tttgtgatggacgagaatgacaacgcacccactgtcaccttccccagcaacagctcctac
accgtgctgccaccctccagcaacatgcgcaccgtggtggccacggtggttgccaccgat
gctgacaccggtctcaatgctgacctcaactacagcatcgtcgggggcaaccccttcaag
ctcttcgagattgacccggccagcggtgtggtgtcactggtgggcaagctggcccccaag
cactatggcctgcatcgcctcgtggtacaggtgaatgacagtgggcagccaccccagtcc
accactgccctgctccatgtctttgtcaacgagagcctgtccaatgccaccgtggtggag
ggccaggtggcccgcagcctccacactcccctggcccaggacattgctggcgaccccagc
tacgagctgagcaagcagcggcttagcatagtcatcggcgtggtggctggcatcatgacc
gtcatcctcctcatcctggtggtggtcatggcccgctactgccgctccaagagcaaacac
ggctacgaggctggcaagaaggaccacgaggatttcttcaccccgcagcagcatgacaag
gccaagaagcccaaaaaggacaagaaaggcaagaagggcaagcagcccctctacagcagc
atcgtcaccgtcgaggcttccaagcccaacgggcagcgctatgacagcgtcaacgagaag
ctctcggacagccccggtatggggcggtaccgctcggtcaacggtggcccgggcagcccc
gacctggccaggcactacaagtcgagctcgccgctgcccacggtccagctgcacccgcag
tcccccactgccggcaaaaagcaccaggccgtgcaggacctgcccccggccaacaccttc
gtgggcgccggcgacaacatctccatcgggtcggaccactgctctgagtacagctgccag
gccagcagcaagtacagcaagcagccatttcgtagagtgacgttttctgttgtgagtcag
cctcaggacccacatcaagggtcattgcagagttgctatgacagcggtctggaggagtca
gaaacaccaagcagtaagagttcatcagggccaagactgggtgcccttccactcccagag
gacaactacgaaaggactacgccggatggcagtgttggtgaggcagagcatatggaaaat
gattcaaggcctctaccagatgtagccctgacagggaagtgtacccgagaatgtgatgag
tatggccactcggactcctgctggatgccagttcgcacttctcctgaaagaaagcagaag
agccagccaaaactctccactttcatgcctgtcgatgaacggggcagtcaggaaaagctg
gccaatggagaagcctccctcatgggtgatcgcaacagaaacctccttaacaaaaagttg
acctcatcctatgagaccttcagcgcggctagtttcagcaaaaatgaagaaggcaatcca
gaggatatcccccttacacagacaggggaatacaagccatctcctgtcaatactctaact
agaagagaagtttacctgtag
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