Chroicocephalus ridibundus (black-headed gull): 134516990
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Entry
134516990 CDS
T10910
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
134516990 (ZSWIM8)
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GFIT
Other DBs
NCBI-GeneID:
134516990
NCBI-ProteinID:
XP_063194011
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Position
6:23656640..23723709
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AA seq
1822 aa
AA seq
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MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAETACEAGRTHGQEPGGSCLQPGDRLRPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKTAVGKAKLPVNKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDTFEEDGGVYFSEG
PEPSVRSSSMAKKSPKDPVGEMGSGDDDLPSADENSGGVSLKPEEVGDNGAAGGGDDGEE
EDDYQVYYLNPQEVAKEDDDKAEGGNEEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SNEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHAAQSTAAIQQLPGTSVTQQAAVSTAVQSSPENFVEK
SAQESSQRSPCEPAAEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSASGAR
AASEASRGLTDNRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTMAGPAMAHTHTQ
GLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTTPS
LAATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVAIGSVHAGSTFPAIQGASLTTLSS
QPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPP
YTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTP
AFHQLVQRCQQAYIQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNL
KRSKQTKELWQRVSLEMTTFSP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcagagtgggaggacggggagaggttttcatttgaagactctgat
cgctttgaagaagactctctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggaggaagcaatcggctggacccaattctcccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactgtctgcaaaacaggttgcatttcacattccattc
gaggtggtggagaaagtttatcctccagtgcctgagcaactgcaacttcggattgccttc
tggagtttcccagaaaatgaagaagatatcagattgtactcgtgtttggcgaatggcagt
gcagatgagttccagcgaggggagcagctcttccgggtgagggctgtcaaagaccctctc
cagataggtttccatctgagtgccactgtggttcccccacagatggtgccacccaaaggt
gcgtacaacgtggcggtgatgtttgatcgatgcaggatcacgtcatgcagctgtacctgc
ggagctggggccaagtggtgtgctcacgtcgtggcgctctgcctcttccggatacacaat
gcatctgcggtatgcttacgagcacctgtttctgagtccttgtctcggctacaaagagac
caattgcaaaaatttgctcagtacctaatcagtgaacttccacaacagattcttccaact
gctcagcgcttgctggatgagctgttatcttctcagtctactgccatcaacacagtgtgt
ggagccccagatcccactgctggaccctctgcatcagatcaaagcacctggtacttagat
gagtctactctgagtgacaacataaagaaaacccttcataaattctgtggaccctctcct
gttgttttcagtgatgtgaattcaatgtatctctcttccacggagccaccagctgctgct
gagtgggcctgtctcctgcgtcccctgcgaggaagagagcctgaaggaatctggaacctg
ctttccattgtgcgggagatgtttaagagacgggatagcaatgcagctcctttgctggag
attttgactgatcagtgtctcaactatgagcagataaccggctggtggtacagtgtgcga
acatctgcatcacacagcagtgctagcgggcacacaggacgcagcaacggccagtcagaa
gtagctgctcatgcttgtgcgagtatgtgtgatgagatggtggttctttggaggctggct
gtccttgacccaactattagtccacagaggcgcagggacctttgctcacagctcagacag
tggcagctgaaagtcatagataatgttaagaggggtcagcacaagaaatcactggagaag
ctcttccagggtttcaagccagctgtggaagcctgttacttcaactgggaggaagcttat
cccattccggggatcacatatagcagcactgacaagaagaactcattctgttgggtaaag
gccatccagcagaggagctgccggttgcagtgtgcagaaactgcctgtgaggctggtaga
acccatggacaggagcccgggggatcatgtctgcagcctggggacaggctgcgtccctct
cctcaggagccagcagttcgtccaaaggaactaaccggaaagcggaaagttgtctctgaa
acaccacagagggttctgagacgactttccgcagagggtgataaagctgtgtataagact
gcagtgggcaaagcaaagttgccagtgaataaaggcttgaccagtaaacacagcgggaaa
cgccgcatgagcagtgaagacagctctttggagccggacttggcagagatgagcctggat
gacagcagcttggctctgggggcagaagccagcaacacatttagttttacagaaagccca
ttgagcagaagctacagggacacctttgaagaggatggtggggtgtacttctctgaggga
cctgagcccagtgtcaggagcagttccatggccaagaaatcgcccaaggatcctgtgggg
gaaatgggtagtggtgatgatgacctgccttctgcagatgagaacagcggtggtgtgagc
ctgaaaccagaagaagtgggagataatggtgcagcggggggaggggatgatggagaagag
gaagacgattaccaggtatactatctgaatccacaagaggtagccaaggaagatgatgac
aaagctgaagggggaaatgaagaggagcaggatatatttgctggtataaagcctctggaa
caggagaaccggatggagatcctgtttgcctgtgcagaggccctgtatgcccatggatac
agtaatgaagcatgccgcttaactgtagagctcgccagagacctactggccaaccctcca
gatctcaaagtggaacagccaccaactaagggcaaaaagaacaaggtatcaaccagcaag
cagacgtggatggcaaccaacaccttgtccaaagctgctttcttgctgactgtgctaagt
gagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggagctgcag
agaccacctgcctctacaaaggctctggaggtgaagctggcgtatcaggagtctgagatt
gcagccctcttgaagaagattcccttgggcactaatgagatgaacactattcgaggaaga
gctgaagaactgcgagaagggacactatgtgattaccgtcctgtcctgcctctgatgttg
gctagctttatatttgatgtcctgtgcactccagtggtttctcctacaggctctagaccc
ccaagccgtaattggaataatgaaatgcctggagacgaagagcttggttttgaggcagct
gttgctgctcttggcatgaaaacaactgtcagtgaagcagaacatcctctgttgtgtgag
ggcacccgaagggagaaaggggatctggcactagcactgatgattacttacaaggatgat
cagtctaagctgaagaagattttagacaaactcctggacagagagagtcaaactcacaag
ccacagactctgagttccttctactcatccagcaagcctacagtagcaaatcaaaaatct
ccttccaaacatgctgcccagtccactgcagctatccagcagcttccagggacttctgtc
actcagcaagctgctgtaagcactgcagtccagagcagtcctgagaacttcgtggagaag
agtgcacaggagagctctcagaggtccccctgtgagccagctgcggaggccactgtcctg
aaacaagagggaaaggtccccagtcgcctggcccttggaaaccgaggtggatacaatggg
agatgctggggttcacctgtcaggcagaagaagaaacacacaggcatggctagtattgac
agcagtgctcctgaaaccacctctgacagttctccgacgctcagtcggcgtccactacgt
gggggatgggcaacaacatcctggggcagaggacaggacagtgacagcatcagcagttct
tcaagtgattcgctgggatcttcctcatccagtggcagtaggagagccagtgggggagcc
cgtgcaaagactgtggaagttggaaggtataaagggaggcgattggagagtcatgctcct
catgtcccaaaccagccttcagaggcagctgctcacttctactttgaattggccaagaca
gtccttatcaaagcaggtggaaatagcagtacctccatcttcacccacccctcctccagt
ggtgggcaccagggaccacaccggaaccttcacctctgcgccttcgagattgggctgtat
gcactagggctgcacaactttgtgtctcccaactggctgtctcgaacttactcctcccat
gtctcttggatcacagggcaggccatggagattggtagcgcagccttgaacatcttggtg
gagtgttgggacgggcatctgactcccccagaagtggcatcattggcagacagagcttca
cgggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgcctgccc
catgcccatgccctgaacccaaatgagatccagagggctctggtgcagtgtaaggaacag
gacaatctgatgctggaaaaggcctgtatggcagtagaagaggcagccaaaggaggtggc
gtgtacccagaagtcctctttgaagtagctcaccagtggtactggctttatgaacagact
gttggtgggaccccagcccagagagaaggtgccactggctgcagtgccagtggtgcccga
gctgcctctgaagcatcacgtgggttgacagacaaccgggtgacctctgagccaaccact
gtaacagtggcagctgcggtgactgcggcagcgacagtcatgccggtgatctctgtgggg
tcgaccatgtaccagcagcatacaatggcagggccggcaatggcacatacacacacgcag
ggcctccacccttacaccacccttcagactcacatcccttgtaatccccaatatattgga
cacactatccagcacatgccgcgcccagctgtcttcccggtgcctggctcagcgtacccg
cagggtgtccatccagcattcataggagcacagtacccttattcggtaaccacaccatca
ttggcagctacagcagtgtcattccctggtgtgccggtcccatccatgacgcagatcgcg
gtgcatccctatcacagtgagacaggactatcactgtcttccaatgtagcgataggaagt
gtccatgcaggatcaacgttcccagcgattcagggggcttccttgacaactctgtcctca
cagcccaactcccttgttacagggggttttcctgccgaggatgagcagcacagtcagcct
gtgagcccccagggtctgcactacctccactccgcataccgagttgggatgctggctctg
gagatgcttggccgaagagctcacaacgaccatcccaacaacttctcccgtagcccaccc
tacacggaggatgtaaaatggctccttgggttagctgcgaagttaggtgtaaactacgtg
catcagttttgcgttggtgcagccaagggggtgctgagcccctttgtgctccaggagatc
atcatggaagctctccagaggctcaaccctgcccacgtgcacaaccacctgcgcacccca
gccttccaccagctggtgcagaggtgccagcaggcctacatacagtacatccatcatcgg
ctgatccatctcactccagctgactatgatgactttgtgaatgccatccgcagcgccaga
agcgccttctgcctgactcccatgggcatgatgcagtttaatgatattcttcagaaccta
aagcgcagcaagcagacaaaggagctgtggcaaagggtctctctggaaatgaccaccttc
tcgccgtga
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integrated database retrieval system
