Chroicocephalus ridibundus (black-headed gull): 134517043
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Entry
134517043 CDS
T10910
Symbol
RRP12
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crid03009
]
134517043 (RRP12)
Ribosome biogenesis [BR:
crid03009
]
Eukaryotic type
90S particles
Other 90S particles
134517043 (RRP12)
Pre-60S particles
Other pre-60S particles
134517043 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
TOR1L1_N
FDF
Motif
Other DBs
NCBI-GeneID:
134517043
NCBI-ProteinID:
XP_063194166
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All DBs
Position
6:complement(16192530..16206954)
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AA seq
1295 aa
AA seq
DB search
MARSGRLRSGAAAKLKRWRKGHSSDCNPETRQHRLAARSRFYSRPAEKSNLTVDAVKLHN
ELQSGSPRLERPSDSAQLHMEEDDTGEAATEKSSGTFLSGLSDCTNVTFSKVQRFWESNS
AAHKEICAVLAAVTEVIRSRGGKESETEYFATLMTTLEAVESPESLAAVAYLLNLVLKRV
PSPVLIKKFSDASKAFMSIISSQACNSSTSALRWVLSCLATLLRKQDLAAWSYPVTLQVY
HGLLSFCVHTKPKVRKAAQYGVCSVLRGSEFMFGDAAPEHHPAAPSTAKFCVQEIEKSGG
TKEATTTLHILTLLRDLLPCFPAAVVKTCCETLLRVMTLSHVLVTACAMQAFHSLFSAQA
SVACLPAELNAQIITALYDYVPSTSDLQPLLTWLSTMERAHINLGRLQKDLCWAHLPRLF
SAAMNCFLSPHSQVVSAAAQTLETLLSECVAPHMDDLGTVSASAPAPATYLCKMFRSVEE
GLTYRFHAAWDEVLRVLEVFFETCGKQCHPIMRKCLRSLCDLRLSPHFPYTAEVDQAVGA
AVSAMGPEVLLEAVPLEIDGKEETLDFPRSWLLPVLRDYVQGARLGFFTSYFLPLAATLK
SRAVEFTQAGKSMEAKIYDTLQWQVWTLLPGFCTHPTDVLGSFKGLARTLGMAISERPDL
RPTVCQALRTLINKGCETDAEKAEVGRFAKNFLPILFNVYSQSEEDGGSSAQRRSVLDTV
RAYLTITDPQMVCGFLQKASEKLTSPESSEFARHSILDLVVAMAPYADEQALGSLYRTIQ
PSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVRSHLQDLQTTLLESLKSAASPAKRPRL
KCLFHIVKQLSAEHEPFVTALVPEVILCTKEVSVGARKNAFVLLVEMGHAFIRFGPTPQE
GMQRFLFLIYAGLTGSVTMISCTVLALTRLFFEFKDHLELSVVEQLLQNICLLLASRTRD
VVKAALGFLKVTLLLVDTKLLAKHVQAMLEAVGNLSDDMRRHFRMKLRNLFTKFIRKFGF
ELVKGLLPAEYHKVLANVRKAEARSRKQRALRRAAADTDEEEAPPAQPRGDSFEEILADS
EDEEEEEEERQRSKEWRKQARQKGQAWLKEGEEDEPLNFLDPNVSQRVLATKPGPKRSRG
VSHDFQVSEDGRLIIHEEEDEVDDDEAKGADEEMADVLQDVGLRSKKSQKRRFREEQGHE
EAEAGTYPQYRPGGSGIHRQLSKEPAFGAEYRSKKGKGDVKKKGQLDPYAYIPLNRAKLN
RRKRAKMQGQFKGLMKGAQRGAKAGRRNRLKAQRP
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagcgggcggctccgctcgggcgccgccgccaaactgaagcggtggcggaag
ggacacagcagcgactgcaaccccgagacccgccagcaccgtctggccgcccgtagccgc
ttctacagccggccggcggagaaaagcaacttgacagtggatgcggtgaagctgcacaat
gagctgcagtcagggtccccacgtttggagcggccaagtgacagcgctcagctccatatg
gaggaggacgatactggggaggccgccacggagaagtcctccggcaccttcctgagcggg
ctgagtgactgcaccaatgtcaccttcagtaaggtgcagcgcttctgggagtccaactct
gccgctcacaaagagatctgtgctgtgctggcagccgtgacggaggtgatccgctcgcgg
ggcggcaaggagagtgagacagagtactttgccacgctgatgactacgctggaagcggtg
gagtcccccgagtcactggctgctgttgcctacctgctcaacctcgtcctaaagcgggtc
ccaagccctgtgctcataaaaaagttctcagatgcctcgaaagccttcatgagtatcatc
tcctcgcaggcctgcaacagttccacctctgccctgcgatgggtcctctcttgcctggcc
acgctgctgcggaagcaggacttggcagcctggagctaccctgtcaccctccaagtctat
cacggcttgctgagcttctgcgttcataccaagcccaaggtgcggaaagcagcacagtac
ggcgtgtgctctgtcctgaggggcagtgagttcatgtttggagatgcggcccctgagcat
caccccgcggcaccttccaccgccaagttctgcgtgcaggagatcgaaaaatctggaggc
accaaggaggccaccaccaccctgcacatcctcaccctgctgcgggacctgctgccctgc
ttccccgcagccgtggtgaaaacctgctgcgagaccttgctccgagtcatgaccctcagc
cacgtgctggtgacagcatgcgcaatgcaagccttccatagccttttcagtgcccaggcc
agcgtggcctgcctgccagccgagctgaatgcccagatcatcaccgccctctacgactac
gtgcccagcacgagtgacctgcagccgctgctgacctggctgtccaccatggagcgggcg
cacatcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccgcctcttc
tcggctgccatgaactgcttcctctctccacactcccaggtggtgtcggcagcagcgcag
accctggagacactcctgagcgagtgcgttgctccccacatggacgacctgggcaccgtc
tctgcatctgccccagcccctgccacctacctgtgcaagatgttcagatcagtggaggaa
ggcctgacatatcgtttccatgcagcgtgggacgaggtgctgcgagtgctggaggtcttc
tttgagacatgtgggaagcagtgccaccccatcatgaggaagtgtctgcggtctctgtgt
gacctacgtctctccccacacttcccctacaccgctgaagttgaccaggcggtgggggct
gctgtgagtgccatgggccccgaggtgctgctggaagccgtgcccctggagatcgacggc
aaggaggagacactggatttcccccgcagctggctcctgcctgtgctgcgggactatgtg
cagggtgcgcggctcggcttcttcaccagctacttcttgcccttggcggccaccctgaaa
agcagagccgtggagtttacccaggctgggaagagcatggaggccaagatctatgacacg
ctgcagtggcaggtctggaccctgctgcccggcttctgcacccaccccacggatgtgctg
gggtccttcaaggggctggcccgcaccctgggcatggccatcagcgagcgcccggacctg
cgccccaccgtgtgccaggccttgcgcaccctcatcaacaaaggatgcgagacagatgca
gagaaggcagaagtgggtcgctttgccaaaaatttcttgcctatcctgttcaatgtgtac
agccagtccgaggaggacgggggcagcagtgctcagcgccgctccgtgctggacactgtc
cgagcttacttgaccatcaccgatccccagatggtgtgtgggttcctgcagaaagcgagc
gagaagctgaccagtcctgagagctccgagtttgccagacactccatcctggacctggtg
gtggcaatggcaccctacgctgatgaacaggccctgggctccctgtaccgcaccatccag
ccttccctccagagcaaggagcgcagcatgcagaagaaggcgtaccgtgtgctggaggag
gtgtgtgccgctccccatgccccctgccaggccttcgtccgctcccacctgcaggatctg
cagacaacgctcctggaatcgctcaaaagcgcagcttccccagccaagaggccccggctg
aagtgcctgttccatatcgtgaagcagctttctgcagagcatgagcccttcgtcactgcc
ctggtcccagaggtcatcctctgcaccaaggaagtgtcagtgggggcccgcaagaacgcc
tttgtgctgcttgtggaaatggggcatgccttcatccgcttcgggcccacaccccaagag
ggcatgcagcggttcctgttcctgatctatgcggggctcacgggctcggtcaccatgatc
agctgcacagtgctggcactgacccgtctgttctttgagttcaaagatcacctggagctg
agtgtggtggagcagctcctgcagaacatctgcctgctgctggcctcccgcacacgagac
gtggtgaaggcagccctgggcttcctcaaggtcacactgctgctggtggacaccaagctg
ctggccaagcacgtccaggcgatgctggaggctgtggggaacctttcagatgacatgaga
cgccacttccgtatgaagctgcgaaacctcttcaccaagttcatccgcaagttcggcttt
gagctggtgaaggggctgctgccggccgagtaccacaaggtgctggcgaacgtccgcaag
gcagaagcccggagccgcaagcagcgtgccctaaggcgggcagctgcggatacagatgaa
gaggaggcaccacctgcacagcccagaggagacagctttgaggaaatcctggctgactca
gaggatgaggaggaggaagaggaagaacggcagcggagcaaggagtggaggaagcaagca
cggcagaagggccaggcctggctgaaggaaggggaagaggatgagcccctcaacttcctg
gaccccaacgtgtcccagcgggtgctggccaccaagccaggcccaaagcggtccagagga
gtgagccatgacttccaggtgtctgaggatgggcgcctgatcatccatgaagaggaggat
gaggtggacgatgatgaagccaaaggagcggatgaggagatggcggatgtgctgcaagat
gtgggtctccgcagtaagaaaagccagaagcgtcggttcagagaggagcaaggccatgag
gaagccgaggctgggacctaccctcagtacaggcctggaggctctgggatccaccggcag
ctgagcaaggagccggccttcggtgcagagtacagatccaagaaaggcaaaggtgacgtg
aagaagaagggccagctcgacccctatgcctacatccccctgaacagagctaaactcaac
agaagaaagcgggcgaaaatgcagggccagttcaagggcctgatgaagggagcccagcgt
ggggccaaggccggccgcaggaaccgtctgaaggcccagcgcccctga
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