Chroicocephalus ridibundus (black-headed gull): 134517080
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Entry
134517080 CDS
T10910
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134517080 (TRIP12)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
HECT type E3
134517080 (TRIP12)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134517080
NCBI-ProteinID:
XP_063194263
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Position
6:49664329..49743258
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AA seq
2067 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPENRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQEGDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHTKTKRRHLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSGSAVESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSKTSGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGED
EISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMK
EDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSS
HIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPK
VCTNGSGTLGTATTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRL
PKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNMEPA
RTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCT
ATEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDTVSRDIR
LKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGT
GSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVR
GYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQ
YSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGSKDCVGGKRGRAQTAPTK
TSPRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRYW
YYLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFD
TRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESV
MQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQE
GTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKW
MLRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGC
SVEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGF
ESVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSS
FDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKL
PDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagaatagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaagaaggagatccagagagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctagaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggaaactaacaagccacatactaaaactaagagaagacacttagaccaagaa
cagccgaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
ggttcagcagttgaatcaactggcgctgaagagaagtcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttctacatcatcctcctcctcttctgctgttgcctctgcttcttctactgttcctcag
ggtgccagagtgaaacagggaaaggaccagaataaggctagacgttcccgttctgcatcc
agccccagtccaagaaggagtagcagggacaaagaaccgagtaaaacaagtggctcttca
aagtttgactgggctgcacgattcagcccaaaagtcagtctgcctaaaacaaaactgtct
ctaccaggctcttccaagtcggagacatcaaaacctggaccttcaggactacaggctaag
ctagcaagtctaagaaaatccacaaagaagcgcagtgaatcaccacctgctgagctcccc
agtttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgat
cctgacaacaaccaggatggagttaactcttcagctgcgcgtacagatgaggctccccag
ggagctgcagcttctagttctgttgctggggctgtaggtatgacaacctctggagaaagt
gagtcagatgattctgagatgggaagactacaagctctattagaggctaggggtcttcct
cctcacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattgga
agtggagctagttctaaagcccaacagcttttacaaggtctccaagccactgatgaaagt
cagcaacttcaggcagtgattgagatgtgccagctgttggtcatgggcaatgaagaaaca
ttaggaggatttccagtcaagagtgttgtaccagctttgataacactgctgcagatggag
cacaactttgacattatgaaccatgcatgtcgggccttaacatacatgatggaagcactt
cccagatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagtt
attcagtgcattgatgtggcagagcaggcgcttacagcgctggagatgttatctcgcagg
catagtaaagccattctgcaggcaggtgggttggcagactgtttgctgtatctggaattc
ttcagcataaatgcacagaggaatgcactagctattgctgccaactgctgccagagtata
acacctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacg
catcaggacaaaaagtctgttgaaagcacttgtctctgttttgcacggctagtggacaac
ttccagcatgaggagaacttgctccagcaggttgcttccaaggacttgttaacaaatatc
cagcaactcttggtagtgacgcctcctatcctgagctcaggaatgttcatcatggtggtg
cgcatgttttccttaatgtgctccaattgtcctacacttgcagtccaacttatgaagcaa
aatattgcagaaacgcttcatttcctcctttgtggagcctcaaatgggagctgtcaagaa
caaattgaccttgttccacgaagtcctcaagaactttatgagcttacttctcttatctgt
gaactgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctgaagaaa
ggaaacgcacaaaatacagatggtgcgatatggcaatggcgagatgacaggggcctttgg
catccctataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggat
gaaataagcctgtctacgcttgggcgtgtctatactattgattttaactctatgcagcaa
ataaatgaggatactggaacagcacgtgccattcagcgaaaaccaaaccctttagccaat
acaaacactagtggacattcagaattgaagaaggatgatgctcgagcacaactaatgaaa
gaggacccagaactggcaaaatcctttatcaaaacattgttcggtgttctttatgaagta
tatagttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggata
atttattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttctagt
catattgcctccatgctgtcgagtcaagaccttaagatagtagttggagccctgcagatg
gcagagattttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggg
gtgatgcatcaagtgaaaaacttagcagagtctgaggctttgttaacaagcccaccgaaa
gtatgcactaatggatcaggaacgctgggtaccgctacaacgataagtactggaacagca
actgctgccagtaatgcagctgcggatttgggctctcctagcttacaacacagccgggag
gattctttggatcttagcccacagggacgactgagtgatgttctaaagagaaaaagattg
ccaaaacgagggccaaggagaccaaaatactctcctccaagagacgatgacaaagtagac
aatcaagctaaaagccctacaactactcaatctcctaaatcttccttcttggcaagttta
aatcccaaaacgtggggaagattaagcacacagtccaacagtaataatatggaaccagca
cgaacagcaggagtaagtggtcttgcaagggctgcttccaaggataccatttccaataac
agagaaaaaattaagggctggattaaggagcaagcccataaatttgtagaacgttatttt
agttctgaaaacatggatggaagcaatcctgcactaaatgtattacagagactttgcact
gcaactgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgt
agcattgtctcggagtctgacgtctcctcatttgaaatccagcatagtgggtttgttaaa
caactgctgctttatttgacatctaaaagtgagaaagatactgtaagcagggatatcaga
ttgaaaagatttcttcatgtatttttttcttctccacttcctggagaagaaccccttgga
agattagagccattagaaaatgcacctttgttggcgttagtccataaaatgaacaattgc
ctcagtcagatggaacagtttcctgtcaaagtgcatgacttcccaagtggaaatggaaca
gggagcagtttttctcttaacagaggatcccaagctttaaaattcttcaatacacaccaa
ttaaaatgccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtgga
cctgtgaagattgacccgctggctttggtacaagccattgaaagataccttgtagttaga
ggctatggaagagttagagaagatgatgaggatagtgatgatgatgggtcagatgaagaa
atagatgaatctttggctgctcaattcttaaattcagggaatgtgagacatagactgcag
ttttacattggagatcacttactgccgtacaatatgactgtgtatcaagcagtcaggcag
tacagtttgcaagctgaggaggagagggagtctacagatgatgaaagcaacccattagga
agagctgggatttggacaaaaacgcatacaatttggtacaaacctgtgcgagaggatgaa
gatggtagtaaggactgcgttggtggtaaaagaggaagagcacaaactgctcccacaaaa
acctctcctagaaattctaaaaagcatgatgaattgtggcatgatggtgtatgcccttcg
gtattaaatcctctagaagtttacctcatatctactccacctgaaaacataacatttgaa
gatccctcattagacgttattcttcttttgagagttttacatgctatcagtcgatactgg
tattacttgtatgataatgcaatctgcaaggagataattccaacctcagagtttatcaac
agtaaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaattatgacagga
aacataccaacctggctgacagaacttggaaaaacatgcccgtttttctttccatttgat
acccgtcaaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactg
ctggatactaatccagaaatcaatcaatcagattctcaggatagcagagtggcaccacga
ctggacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtg
atgcaggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggc
acaggccttggccccacgctagagttctatgcacttgtatctcaggaactacagagagca
gacttaggcctttggaggggagaagaagtgactttagccaatccaaaaggaagccaggaa
ggtaccaagtatatccataaccttcaaggcctttttgcacttccttttggtagaacagcc
aagccagctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggcc
aaggcaatcatggattttagactggtggaccttcctcttggacttcctttttataaatgg
atgctacgacaggaaacttccttgacatcacatgatttgttcagtattgatccagtagtc
gccaaatcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggac
aaaacacagaccaaagaaagtctacagtatgcattggaggctctgacaatgaatggctgc
tcagtggaagatttagggctggacttcacacttcctgggtttcctaatatagaactgaaa
aaagggggaaaagatacaccggtcaccatccacaatttagaggagtacctcagattggtt
atattctgggcactaaatgaaggtgttgccagacagtttgactcattcagagatggattt
gaatcagtcttccccctcagtcatcttcagtacttctatcctgaggagttggagcagctt
ttgtgcggcagtaaaacggacacttgggatgcaaagactttaatggaatgttgcaggcca
gatcacggttatacacatgacagtcgagcagtgaagtatctctttgaaattctcagtagc
tttgatagtgagcagcaaagactgtttcttcagtttgtgacgggtagccccagactgcct
gtaggaggctttcgaagtttgaatcctccattgacaattgtgcgcaagacatttgagtct
acagagaatccggatgatttcttgccctcagtaatgacttgtgtgaactatctcaaattg
ccggactattcaactattgagataatgcgtgaaaaactattgatagctgcaagagaaggg
cagcagtcattccatctgtcctga
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integrated database retrieval system
