Chroicocephalus ridibundus (black-headed gull): 134517095
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Entry
134517095 CDS
T10910
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04148
Efferocytosis
Brite
Membrane trafficking [BR:
crid04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134517095 (VPS8)
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GFIT
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NCBI-GeneID:
134517095
NCBI-ProteinID:
XP_063194306
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Position
6:complement(60886323..60968212)
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AA seq
1397 aa
AA seq
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MEAVPEPGGCPAGAEAEPCPEPPAHRLSVAELDRELDSRSELIDDKEFDIPQVDTPPTLE
SILNETDDEEESFILEDPFLLNVDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDTLSLH
GSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLCLG
STAVGAQYGAVSALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIK
FTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVELRDHP
ITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAF
CRGDVVHFLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQT
QEELETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQVFYLGTKS
VHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLSGDTSKRKAVIADRMVE
ILLHYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYSLLLQRTDLLFNQIYDKMSENSVA
KGVFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLEACIVHMDITSLDIQQVVL
LCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVVMGNKLLVYISC
CLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEVYPYVRTLLHFDTREFLNV
LALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFV
NRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEETRLIQMAEKAEFYQICEF
MYERQLRYDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSAEEKQSVWQKALEHIEELLLL
SPCKAADLVAIHFSEQIESIITNLQDQFLLFQFLRSLLDPREGINQDLIHLPPCVTEQFI
ELLCQYSPDQVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLERL
QSKLLTLTQEDESSAELPLLESIEDTLMKTIALCQRNSHNLDQQQREALWFPLLEAMMSP
QKLSGSSQCRYSESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVLGM
LDTFNYEQTLLETTTSLLNHDLHWSLCNLRASVTRGLTPKQDYCCVCLQQYKRRQETADE
IIVFSCGHLYHSLCLLSKECGTVTKGLMRWMCYKCNSSNKGGKLSENFSELKKGSGASLA
QTSSETLLDPQQIQAFDQLCRLNRGTSRLALLTELSRSHGGEKHGLLSVSQGDPATSSVF
QNENFQLHLAPPPLAED
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtcccggagccgggcggctgcccggcgggagcggaggccgagccctgcccg
gagccgcccgctcaccggctgagcgtggcggagctcgaccgcgagctggactcccgcagc
gagctgatcgatgacaaagaattcgacattcctcaagttgatacccctccaacactggag
agcatcttaaatgagactgatgatgaagaggagtctttcattttggaagatccctttctc
ttgaacgttgataatacagatacgcactcctatgacacatcttctgtagcaagctctgac
agcggggaccggacacacctcaaaaggaagaaaaaactcccagatactctctcactccat
ggatcagttatacggctctcgcttctgaaagggatttctgcccaaatagtgtctgccgca
gacaaagtggatgctggcttgcccactgcaattgcagcatcaaatctgatagcagtgggg
acttcccatgggttagcactgatatttgatcaaaaccaggctcttcggctttgtctgggc
agcactgctgttggggcccaatatggggctgtctctgctctcagcatcaacaacgactgt
tcaaggctcctgtgtggctttgcgaaaggacagatcacgatgtgggatctggccagtggg
aagctgctacgatcaataacagatgcccacccaccaggaacagccattttgcacatcaag
tttacagatgacccgacgcttgcaatttgcaatgacagcggaggctccgtatttgaactg
tcatttaagagggttatgggagtgagaacctgtgagtctcgatgtctcttcagtggctca
aaaggggaagtttgctgtattgaaccgttacacgcaaaagttgagctgagagaccatcct
atcacccagtattccctgctggccatggcctccctaacaaagatactggttattggcctg
aagccatctctgaaagtgtggatgacttttccctatggtcgtatggacccttctagtgtc
cctcttctggcgtggcactttgtggctgtacagaactctgtgaaccccatgcttgcattt
tgtcgaggagacgttgttcattttcttctggtaaagagagatgatactggtgcaatacat
gtcactaagcagaggcagcttcatctacactatgacctcatcaactttacttggataaac
tcacggacagcagtgcttctggacagtgtggagaagctgcatgttatagatcgtcagacg
caggaggagctggagaccatagagatctcggaagttcagctagtctacaacagcagccac
ttcaaatcgctggctacgggaggcaacgtcagcgaagccctggcattggttggagagaaa
gcttgttatcagtccatcagcagctgtggcggtcaggtcttttaccttggaacgaagtct
gttcacgtcatgacattgagaagctggagagagagagttgatcacctgctgaaacaagag
cgtctcactgatgccctggctctagcttggtctttttatgaaggtaaagcaaaggctgta
gtaggcttgtctggggacacgagcaagcggaaagcagtcattgcagaccgaatggttgaa
atccttctccattacgccgatcggactttgaagaaatgtcctgaccaaggaaaaatccag
gttatggaacaacattttcaggacgtggtgcctgtcatagttgattacagtctcttactc
cagcgcacggatctattatttaaccagatatatgataagatgagtgagaattctgtagct
aaaggcgtctttctggagtgcttggagccatatatcttaagtgataagctgatgggaatc
acagctcaagtgatgaaagacttgctgcttcacttccaagacaagaacaggttggagaac
ttggaagcctgcattgtgcatatggatatcaccagcttagacatacagcaggtagttctt
ctatgctgggaaaaccatctctatgatgccatgatctacgtctacaacagtgggatgaat
gacttcattagtcctatggagaagctgttcaaagtcattgctcctccactgaacgctggg
aagtctctcacagatgagcaggtggtaatgggcaacaagctgcttgtatatataagctgc
tgcttggcaggccgggcatatccattgggcgatattcctgaagatctggtacctttggtt
aaaaatcaggtctttgaatttctcatccggctgcattcaactgagggatccgtggacgaa
gaggtctacccttatgttcgtaccttgctgcacttcgatactcgggaattccttaatgtt
cttgctctgacttttgaagactttaagaatgacaagcaagctgtggaatatcaacagaga
attgtggacatacttctgaaagtcatggtagagaattctgacttcaccccatcgcaggtt
ggctgtctctttaccttccttgcccgtcagctcgccaagcccaacaacacgttgtttgtg
aacaggacgctttttgatcaggtccttgagtttctgtgcagtccggatgatgactcccgc
cattcggagaggcagcaggtccttttagaattgctccaggcaggagggatagtacagttt
gaagagacccgtcttatccaaatggcagaaaaagcagaattctatcagatttgcgagttc
atgtatgaacgacagcttcgctatgacaaaataattggctgttacctgcgtgatccagtg
agaaaagaagaagttttcaactatattcacaacatcctgtccatgcctggctacagcgct
gaagaaaagcagtcggtgtggcagaaagctttggaacatatagaggagttgctgttgctg
agcccgtgtaaagcagccgacttggtagccattcactttagtgagcagattgagagcatc
atcacgaacctccaggaccagtttttactcttccagtttctgaggagtctccttgatccg
agagaaggcattaaccaagacctgatccacttaccaccctgcgtcacggagcagttcatt
gagctgctgtgtcagtacagcccagaccaggttttggagacgcttaaagttctggaatac
tgcagactggaagaaaccatccagataacccagaaacatcagctccatgaagcttcttca
tatttactggagaagaagggagatatccacggtgcctttttggttatgcttgagcgattg
cagagcaagttgctgacgcttacacaagaggatgaaagctcagctgaactccccttgcta
gaaagcattgaagataccttaatgaaaacaattgccctttgccagagaaattcacacaat
ttagaccagcaacagcgagaggccctgtggtttcccctgctggaggctatgatgtcccca
cagaaattatctggttcttcacagtgtcgatactctgaatctttgaagagtttgacgatg
caagtgctgaacaacatggctgcatttattgctcttccttcaatcctgcagagaattcta
caggatccagtttatggaaaagggaaacttggagaaattcaaggtctcgtcctgggaatg
ctggacacttttaactatgaacaaacccttttagagacaactacgagtcttttaaaccat
gatctccactggtccctgtgtaacctaagagcttctgtcactagagggcttaccccaaag
caggattactgctgcgtttgtctacagcagtacaaaagaaggcaagaaactgctgatgaa
atcattgttttcagctgtggccacttgtaccattcgctgtgtctgctgagtaaagagtgt
gggacggtaaccaaaggcctgatgaggtggatgtgctacaaatgcaactcaagtaacaaa
ggaggaaaactgagcgagaacttctcagagctaaaaaaaggaagtggagcatccttggca
cagacaagttcagagactctgttggatcctcagcaaatccaagcttttgaccaactctgc
cgactgaaccgaggaacgtccagactagctctcctgacagagctgtctcgtagccatggc
ggtgaaaagcacgggctgctcagcgtttcccaaggtgacccggccaccagcagcgtcttc
cagaatgagaacttccagctccatctggccccccctccgctggctgaagactag
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