Chroicocephalus ridibundus (black-headed gull): 134517120
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Entry
134517120 CDS
T10910
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04510
Focal adhesion
crid04520
Adherens junction
crid04810
Regulation of actin cytoskeleton
crid04820
Cytoskeleton in muscle cells
crid05100
Bacterial invasion of epithelial cells
Brite
Cytoskeleton proteins [BR:
crid04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134517120 (VCL)
Exosome [BR:
crid04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134517120 (VCL)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134517120
NCBI-ProteinID:
XP_063194385
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Position
6:24131525..24193268
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AA seq
1137 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAI
RQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQG
LDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKVA
ELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNR
AVANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQ
DLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVE
GIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANMQPQMLIAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMM
MAARQLHDEARKWSSKPDVTVINEAAEAGVDVDEEDDADVEFTLPSDIEDDYEPELLLMP
TNQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQ
CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT
NISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtggcccagcaaatc
tcccacctggtcatcatgcacgaagagggggaggtggacggcaaggccatccccgacctc
accgcccccgtctcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagcatttatcaag
gtggagaatgcctgcaccaaacttgttcgggcagcccagatgctgcaagcagatccttat
tcagtaccagctcgtgactatctcattgatggatcaagaggcatcctttctggaacatca
gacttacttctgacattcgatgaagcggaggtccgtaaaatcatccgtgtctgcaaagga
atattggagtatctgactgtggcggaagtagtagagactatggaagatttggtgacatac
acaaagaatctagggccaggaatgacaaagatggccaaaatgattgatgagagacaacag
gaattaacgcatcaggaacatagggttatgctggtaaactccatgaatactgtgaaggag
ctattgccagtacttatttcagctatgaagattttcgtaaccacgaaaaattctaaaagt
cagggaatagaagaggcattgaaaaatcgtaatttcacagtagagaaaatgagtgctgag
ataaatgaaataatccgtgtattacaactcacttcctgggatgaagatgcctgggcgagc
aagaaggatactgaagccatgaaaagagcattagccttaatagattcaaagatgaaccag
gcaaaaggttggctgagagatccaaatgcacctccaggggatgctggtgagcaagcaata
aggcagatccttgatgaagctggaaaagcaggagaactgtgtgccggcaaagaacgcaga
gagattctgggaacatgcaaaactctgggccagatgactgatcaactggctgacctcaga
gctagaggacagggtgctacacccatggctatgcagaaggcgcagcaggtgtcacaaggt
ctggatttgctcactgcaaaagtggagaatgcagcccgcaaattggaggccatgacaaac
tcgaagcaggcaattgctaagaagattgatgctgctcagaattggcttgcagatcctaat
gggggcagtgaaggagaagaacatattcggggaattatggctgaagcaaggaaagtcgca
gaattatgtgaggagcctaaagaaagagatgatatccttcgttccttgggggaaatctct
gctttgacagctaagctgtcagatctgcgacgacatgggaaaggtgactctcctgaggcc
cgtgcattggctaagcagatagctacgtcacttcagaatttacagtccaaaacaaacagg
gctgtagcaaacacaaggccggtgaaagcagctgtccatttggagggcaagattgagcaa
gctcaaaggtggatagacaatcctacagttgctgatcggggagtaggccaggcagcaatt
cggggtctggttgcagaaggtcgtcgtttagccaacgtcatgatgggaccttaccgtcaa
gacctgcttgccaaatgtgaccgtgtagaccaactggctgctcagctagctgacctcgca
gcaagaggggagggagaatctcctcaggccagggcaattgctgcccagcttcaggactca
ctgaaggatcttaaaacacggatgcaagaggcaatgacccaggaggtttctgatgttttt
agtgacaccacaactcctattaaattattagcagtggcagccactgctccctctgatgct
cccaatagagatgaggtgtttgatgaaagagcagcaaactttgaaaaccacgctgccagg
ctgggagctacagcagaaaaagcagctgcagtcggaactgcgaataaaactactgtggag
ggcattcaagcaacggtgaaatcagcaagggaacttaccccacaggtagtatcagctgct
cgtatcctcctgagaaatcctggaaatcaagctgcttatgaacattttgagacgatgaaa
aaccaatggattgataatgtagaaaaaatgacagggttggtggatgaagccattgatact
aaatctctgttggatgcatcggaagaggctattaagaaagatcttgataaatgtaaagtt
gccatggccaacatgcaacctcagatgctgatagctggtgccaccagcattgctagacga
gcaaaccgcatcctactggtagcgaaacgggaggttgaaaattcagaagaccctaaattc
cgtgaggcagttaaagcagcctctgatgagctgagcaaaactatatcaccaatggtaatg
gacgctaaagctgtggcaggcaacatttctgatcctggtttgcagaagagtttcttggat
tctggatacagaattctgggagctgtggccaaagtcagagaagccttccagcctcaagaa
ccagatttcccccctcctcctcctgaccttgagcagcttcatctgactgatgagcttgct
cctccaaaaccaccgcttccagagggtgaggttcccccacccagaccaccaccacctgaa
gaaaaggacgaagagttcccagagcagaaggcaggagaagctattaatcagcccatgatg
atggctgctaggcagttgcatgatgaagcccggaaatggtctagcaagcctgatgtgact
gtgattaatgaagcggctgaggctggtgtagatgtagatgaggaggatgatgcagatgtt
gaattcactctcccctctgacattgaagatgattacgagcctgagctgctgttaatgcca
accaatcagcctgttaaccagcccattctggctgctgctcagtctctacatcgggaagca
accaagtggtctagtaagggtaacgacatcattgctgctgctaaacgaatggcgcttcta
atggccgagatgtcgcgcctggtgagaggagggagtgggaacaagcgtgcccttattcag
tgtgcaaaggatattgctaaggcctcggatgaagtcactcgactggccaaagaggtggca
aagcagtgcaccgacaagcgcatcagaacaaacctcttgcaggtctgtgagcgaatccca
accatcagtacacaactcaaaattctttccaccgtcaaagctaccatgctgggcagaact
aacatcagcgatgaagagtcggaacaggcaacggagatgttggttcataatgcccagaac
ctcatgcagtctgtgaaggaaactgtgagagaagctgaagccgcatccattaagataaga
acagacgctggattcactcttcgctgggtcagaaagaccccatggtatcagtaa
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