Chroicocephalus ridibundus (black-headed gull): 134517226
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Entry
134517226 CDS
T10910
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
134517226 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134517226 (ERCC6)
03400 DNA repair and recombination proteins [BR:
crid03400
]
134517226 (ERCC6)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
134517226 (ERCC6)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
134517226 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
134517226
NCBI-ProteinID:
XP_063194579
LinkDB
All DBs
Position
6:20271810..20321105
Genome browser
AA seq
1498 aa
AA seq
DB search
MPTDNSHLPDSIQEQDPVATSSNNGQHNVEELGTEQENSTCDSDLDNSIGVPNSASQSST
SAAVPLEMPRRGQPLLQINRQQIQSISYSAQAAELKGLGVDVYDQDVLEQGVLQQVDNAI
NEANKATKIADAEKEYQSVLDDIRSCTTSLKQINKIIEQLSPQAAENKDINRKLDSVKRQ
KYNKEQQLKKIKAKQKRLQAILGGTEILDKVNEIEFEEDEEPGPSCLGSMLMPVQETEWD
ELIRTGQMTPFGTKIPQKPERKTRRLMLNEASDFEKYLADQDKLLSERKKLLLHKGAKKK
VQAKNVKSKAPASTTKEKKGKALSKTDKRLKKHLRRLQKHALQIQSKAEIPREKKYLEAK
KSKREQEDDSGESEYVPDEELFDPEAVEEEEEQASPHAENDSDYELRNLSRKKKYLVKRD
FKEAEDDADFFPSSDEEEQTLGKRKVKRWRDDGDEDYYKQRLRRWQKECLKDKEHQTAEE
LSEESDTEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIA
FLAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKELHTWWPPFRVAILHETGSYT
DKKVKLIREIASCHGILITSYSYIRLMQDIIHSYDWHYVILDEGHKIRNPNAAVTLACKQ
FRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV
KTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFINSKE
VYQILNGDMQIFSGLVALRKICNHPDLYSGGPRILKGVPDAEVEEADQFGYWKRSGKMIV
VESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRYNE
DKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLL
TAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDVSQGTETSAIFA
GTGSDVQVPKHQFKRKLEKTLDNDTSKGDLHLTESSLPKYSKLSNSCSTTHVTDSSKPIE
TSEGTKGNFETFDQNSHAKGNAQAATNVSSLNNSKDESLERADKSMSQSLPGEAGSSENA
KCLNAVVADEVHGADNANVKGDFSLTCGAAGSWEKQVAKTEDGQLDNNHYKCTSKTKHRV
DMLSHESHKDKSKKKHHKDAKFEGERIPHLVKQKRYRQNSEEKEEDSKKNDDYVLEKLFK
KSGVHSVMKHDAIMEASSADHVLVEAEASRVAQDALRALKVSRQRCLGAASGVPTWTGMS
GLSGAPSGIKSRFGQKRNSVLLSSYSTCASPAKKCKDADIMKKENVKKCSSNGHFDVKSG
ESSSSALDSSSLLAKMRARNHLILPQRTGNEGDENHQQAPAPAPVSTEYDELLVDVRNFI
AFQARVDGEASTQELLHEFESKLPVAHSCVFRELLRNLCTFHRSPNGEGVWRLKPEFH
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagacaacagccatctgccagacagtatccaagaacaagaccctgttgctact
tcaagcaataatggccagcataatgttgaggaactgggaactgagcaagaaaatagcact
tgtgacagtgacctggataatagtattggagttcccaactctgccagccagtcatcgact
tccgcggctgttcctttggagatgcccagaagaggacaaccccttttacagatcaacagg
cagcagattcagtccatctcatatagtgcacaggctgctgagctcaaaggtctaggagtt
gatgtctatgaccaggatgtattggagcaaggagttcttcagcaagtagataatgcaatt
aatgaagctaataaagccacaaaaatagctgatgcagagaaagaatatcagtcagtgctg
gatgacataagatcatgtacaacatctctgaaacaaataaacaaaatcattgaacaactt
tcacctcaggctgccgaaaacaaagatataaacagaaaactagattctgtaaaacggcaa
aaatataacaaggagcaacagctaaagaagatcaaagcaaaacaaaagcgtctccaagca
attcttggtggaacagagattcttgataaagtaaatgagattgaatttgaggaggatgaa
gaacctggtccatcatgtcttgggagtatgcttatgcctgttcaggaaacagagtgggat
gagcttattcgtactggccagatgactccatttggaactaaaatacctcagaagccagag
aggaagacacgacgattaatgctaaatgaagcatctgattttgagaagtacttagcagac
caagataagctgttatctgaaagaaagaagttattgcttcacaaaggagcaaaaaagaaa
gtgcaagccaaaaatgttaagagcaaagctcctgcgtctactacaaaggaaaaaaagggt
aaagccctgtcaaaaacagataagcggttaaaaaaacacctgagaagacttcagaagcat
gccctccagatacagtcaaaggcagagattccaagagaaaagaaatatcttgaggccaag
aagtccaagcgtgaacaggaagatgacagtggagagtctgagtatgtacctgatgaggag
ctctttgatccagaagcagtagaagaggaggaagagcaggcatctcctcatgctgagaat
gattctgattatgaactcaggaatttgtcaagaaaaaaaaaatacttggtgaagagagat
tttaaagaagctgaagatgatgctgacttctttccaagctctgacgaagaagagcagaca
ctggggaagcgcaaagtgaagagatggcgagatgatggagacgaagactattataagcag
agactaaggaggtggcaaaaagaatgtttgaaggacaaagaacatcaaacagctgaagaa
ctttctgaagaaagtgacactgaatttgaagagggtttcaaagtaccaggatttctcttc
aaaaagctatttaagtaccagcagacaggtgttaggtggctctgggaattgcactgccag
caggcaggaggaattctgggagatgagatgggattgggcaagaccatccagataattgcc
ttcttggcaggtctgagctacagcaagatcaggactcgtggttcaaattacaggtaccag
ggattgggtccaacagtgattgtttgtccggctactgtgatgcatcagtgggtaaaagaa
ctccacacttggtggcctccatttagagtcgccattctacatgaaactggttcttatacc
gacaaaaaggtgaaactaattcgtgaaattgcttcatgccatggaattttaattacgtct
tactcatacattcgactgatgcaggatatcatccacagctatgactggcattatgtgatt
ctggatgagggtcacaaaatccgaaatccaaatgccgcagtcacacttgcatgcaagcag
ttccgcacacctcatcgaatcatcttgtctggctcccctatgcaaaataacctaaaggag
ctctggtccctctttgactttgtattcccagggaaactgggaacactacccgtgttcatg
gagcaattttctgttccaataaccatgggaggatattccaatgcctctcctgtgcaggta
aaaactgcatacaaatgtgcctgtgtgttacgggacaccataaacccctacttgctgcga
agaatgaaggctgatgtaaaaatgagcctttcccttccggataaaaatgaacaggtcctc
ttttgccgtttgacagatgagcagcgtcaagtctatcaaaatttcatcaactctaaagaa
gtttaccagattctcaatggagacatgcagattttctcgggactagtagctttgagaaag
atttgcaatcaccctgacctctactctggtggtcccaggattttgaagggtgtaccggat
gctgaagtggaggaagcagatcaatttggatattggaaacgttctggaaaaatgatagta
gtagaatccttgctgaaaatatggcacaagcaaggtcacagagtgttgttctttactcag
tcaagacagatgctgcagatacttgaagtctttgtgagagacagaaactattcctacctc
aggatggatggcaccacaacaatagcttccagacagccccttataacaagatataatgag
gacaaatccatatttatttttcttctaacaactcgtgttggtggcattggggttaacttg
actggtgctgaccgggttattatttatgatcctgactggaatcccagtacagacacacag
gctcgggaacgtgcttggagaataggccaaaagaagcaggtgactgtgtataggcttctc
actgcaggtactattgaagagaagatataccacagacaaatattcaaacagtttttaaca
aatagagtgctgaaagaccctaagcagaggcgctttttcaaatccaatgacctttatgaa
ctctttactctgagcagcccagatgtatctcaggggacagaaacaagtgcaatctttgca
ggtactggttcagatgttcaagtcccaaaacaccaatttaaacggaaacttgaaaagaca
ctggataatgacacttctaagggtgatctccatcttacagaaagcagcttgccaaagtac
agcaagctatccaattcctgctcaaccacccacgtgacagattcttctaaaccaatagag
acaagtgagggaaccaaaggaaattttgaaacctttgaccaaaatagccatgcaaaaggt
aatgcacaagcagctactaatgtaagttcgttgaataatagcaaggacgaaagcttggaa
agagctgacaaatctatgtcccagtcattgccaggtgaggcagggtcttcagagaatgcc
aaatgtctcaacgccgtggtggctgatgaagtacatggagcagataatgcaaatgtcaag
ggagattttagccttacatgtggtgctgctggctcttgggaaaagcaggttgctaaaact
gaagatgggcaactagataataatcattataaatgtacctcaaaaacaaagcacagggta
gatatgctgtcacatgagagccacaaagataagtctaaaaagaaacatcacaaagatgcc
aaatttgaaggagagcgcattcctcatctagtgaaacagaagcgatacagacagaacagt
gaagagaaggaggaagactcaaagaaaaatgatgattacgtcttggagaaacttttcaaa
aaatcaggggtacacagtgttatgaagcatgatgccattatggaagcttccagtgcagat
catgtgctggtggaagcagaagcaagcagagtggcccaggatgccttaagagccttaaaa
gtctctcgacagcgatgtttaggagctgcttctggtgtgccgacctggacaggcatgagc
ggtctttcaggtgcaccatcaggaataaagagtcggtttggtcaaaaaagaaattccgtg
ctgctttcttcatattccacttgtgcatcacctgcgaaaaagtgcaaggatgcagatata
atgaagaaagaaaatgtgaagaagtgtagttccaatgggcattttgatgtaaaatctgga
gaatcgtcatccagtgcactagactcttcatctttattagctaagatgagggcaagaaac
caccttattttaccacaacggacagggaatgagggagatgagaatcatcagcaagcaccc
gcccccgccccggtttcaacagaatacgatgaactgctcgtggatgtgcgtaacttcata
gcgttccaggcccgcgtggacggcgaggctagcactcaggaactactgcacgagtttgag
tccaaactgcctgtggcacattcctgcgtctttagagaacttctccgcaatctctgcacc
ttccataggagcccgaacggtgaaggtgtctggaggctaaagccagaattccactga
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integrated database retrieval system
