Chroicocephalus ridibundus (black-headed gull): 134517314
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Entry
134517314 CDS
T10910
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crid03016
]
134517314 (TRUB1)
Enzymes [BR:
crid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
134517314 (TRUB1)
Transfer RNA biogenesis [BR:
crid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
134517314 (TRUB1)
Prokaryotic type
134517314 (TRUB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
134517314
NCBI-ProteinID:
XP_063194760
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All DBs
Position
6:complement(9267154..9305626)
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AA seq
286 aa
AA seq
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MAAREAGGVVLGKSAEKLFSLSGLFAVYKPKGPTSAGVLNLLKEKLLAEAGVQTNGNKRN
QVLKIGHGGTLDSAAAGVLVVGIGKGTKMLRTMLAGSKKYTAIGLLGKATDTLDATGKVT
EEKPYDQITKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARRVR
VYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKQGPFTLEEHA
LHEDKWTIDEIARSLEHCTSLLPDEPSHKKLKTEHPGETAVSCEDK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagggaagcgggcggtgttgtgctgggcaagtccgctgagaagctcttctct
ctgagcgggctgtttgccgtctacaagcccaagggccccacctcggccggcgtgctcaac
ctcctgaaggagaagctgctggcagaagctggtgtgcaaacaaatgggaacaaaagaaac
caggttttgaaaattggacatggtggaactttggacagtgcagcggcaggagttctggtg
gttggtattggaaaaggaacaaaaatgctgagaactatgttggcaggttccaagaagtac
actgccattggactactgggcaaagcgactgatacattagatgctacaggaaaagtaact
gaagaaaaaccttatgaccagataacaaaaggagatcttgaaaacgtgctgcaaaagttc
acaggggacataatgcaggttcctccactctattctgctttgaagaaggatggagaaagg
ctatcaactctgatgaagagaggagaagcagtcgaagcaaagcctgctcggcgagtaaga
gtgtacagcctctctctccagcagttccagccaccactgttcacactggatgttgaatgt
ggtggtggcttttatgtcaggagcctggtcagtgacattggcaaagaactctctacctgt
gccactatgcaagagctgacccgaaccaaacaagggccatttacactagaggagcatgcc
cttcatgaagacaaatggacaattgatgaaattgcacgatccttagagcattgcacgtct
cttctcccggatgagccatctcataaaaaattgaagacagagcatcctggtgaaactgct
gtgagctgtgaagataagtga
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