Chroicocephalus ridibundus (black-headed gull): 134517425
Help
Entry
134517425 CDS
T10910
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04148
Efferocytosis
Brite
Membrane trafficking [BR:
crid04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134517425 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
134517425
NCBI-ProteinID:
XP_063194961
LinkDB
All DBs
Position
1:71061435..71099871
Genome browser
AA seq
863 aa
AA seq
DB search
MSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYVGTNDCFIYHFLLDEKISTAGKI
TFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMMNLEPVPTGAKIKGAVT
FAVNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALILAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIQDSTRSDLYEYIVDFLIFCSDQDL
VWKYSEWVLQKNEEVGVQIFTKRPLEEQEKNNINPDDIISCLNKYPKARVKYLEHLVLER
KIEKEKYHTHLAVLYLEAILQLKSVTTDKCTETTELLLKLRSLLQKSDLYRIHFILDKIQ
GTDLHMESAILYGKLEEHEKALHILVHELKDFHAAEEYCIWNSENRDMQYRRRLFHMLLS
VYLNPGAPDCALVMAAVDLLNNHAAEFDAAVVLQLVPDSWSVQLLSPFLAGAVRQSIHTK
RMTQVALGLAQAENLIYKYEKVKQKGTPILLSDKMVCQVCQNPFCEPVFVRYPNGGMVHT
HCAANRHLNSNTTHHSSSSSNQT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaagctttcaagctcgtttctgctgttgagcgggagatgttaatgggagac
aaaaattacatcaacatcgaatgcattgagtgctgtggaaagaacctttatgttggaacc
aacgactgctttatctatcactttctgttggacgaaaagatatcaacagcgggaaaaata
acttttgctgccactaagcaactacataaatacctgggcttgaagaagcccgtgagtgag
ttaaaagcagcctctgccctcaccaggcttcttgtgctttgcgacaacacaataacacta
gttaacatgatgaacttggaacctgtccccactggtgctaaaatcaaaggagctgtgaca
tttgcagtaaatgaaaaccctgtgagcggggatcctttctgcgttgaagtctgcattatc
tcggtcaagcggcggaccattcaaatgttcatggtgtttgaagacagagtccagatagtg
aaggaagtgtttactccagagcaaccctgtgctgtggctgtagatggttattacttatgt
cttgcacttactacgcagtatatcattttaaattacaatactggcgtctcccaggatcta
tttccttactgcagtgatgagaaacgaccaattgtgaaaaggataggcagacaagagttt
ctgttggctggccccggaggcctaggcatgtttgcaactgtagacggcatttctcagcgt
gcccctgtgcactggtcagagaacgtgattggagcagctttgtgctttccttacgtggtt
gctctcgatgatgagttcattacagtgcacagcatgctggaccagcagcaaaagcaaacg
ttgccttttaaagaaggtcacattctacaggactttgaaggaaaggtgattgttgctact
aataagggtgtgtatatcttggtgccactacctttggaaaaacagattcaagatcttcta
gctagccacagagtggaagaagcccttattctagcaaaaggagctcgaaggaatattcca
aaagagaaatttcaggtaatgtacaaacgaatcctgcagcaagcaggttttatacagttt
gcacagcttcagttccttgaagcaaaagaacttttcagaagcggccagcttgatgtccgg
gagctgatctctctctaccccttcctgttgcctacttcctcttcatttatacggtctcat
ccccctctgcatgagtacgcggacttaaaccagctgacccaaggggaccaggagaagatg
acaaagtgcaaacgattcctcatgagttacttgaatgaagtccgcagcactgaggttgcg
aatggctacaaggaagatattgacacggctttactcaagctctatgccgaggcaaatcat
gaaagtctgctggatctgctggtttcagagaacttttgtcttttaacagatagtgccgcc
tggctggaaaaacacaaaaagtattttgctcttggtctcctgtatcactacaatggtcag
gatgctgcagcacttcagttatgggtgaaaatagttgatggagacattcaagattctaca
cgttcggatctctatgaatatatagtagacttccttatattctgctcagaccaagatcta
gtgtggaaatactctgaatgggttttacagaaaaatgaagaggttggcgtacagatattc
accaaaaggcctttggaagaacaggagaaaaataacattaatccagatgatatcatcagt
tgccttaacaaatatcctaaagcacgtgttaaatacctagaacatctagtgttggaaaga
aaaatagagaaagaaaagtaccatactcatctagctgtcttgtacttggaggcaatactt
cagctaaaatctgtgaccacggataagtgtacggaaacaactgaactgctgttgaaacta
cgcagtcttcttcagaaatctgatctttacagaattcactttattttggacaaaatccag
ggcacagaccttcatatggaaagtgcaattttatatggaaaactagaagaacatgagaag
gctttgcatatccttgtccatgaattaaaggacttccatgctgctgaagaatactgtata
tggaactctgagaacagagacatgcagtacagacggaggcttttccatatgctgctgtca
gtgtatctaaatccaggcgctccggattgtgcactagtcatggctgctgtggatctcttg
aataaccatgctgctgagtttgatgcggctgtagttttgcagctagtgcctgacagctgg
tcagtgcagctcctctccccgttcctggctggagcagtgaggcaaagcattcatacaaaa
agaatgacgcaggttgcacttgggttagcacaagctgaaaacttaatctacaaatacgag
aaggttaagcaaaaaggaaccccaattcttctttcggacaaaatggtctgtcaggtgtgc
cagaatcctttctgcgagcctgtatttgtaagatacccaaatgggggtatggtccacaca
cactgtgctgcaaacagacatctgaattcaaacacaactcatcactcctccagctccagc
aatcagacttga
DBGET
integrated database retrieval system
