Chroicocephalus ridibundus (black-headed gull): 134517434
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Entry
134517434 CDS
T10910
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134517434 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134517434 (DHX36)
03012 Translation factors [BR:
crid03012
]
134517434 (DHX36)
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134517434 (DHX36)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134517434 (DHX36)
Translation factors [BR:
crid03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134517434 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
Sir1
PhoH
Motif
Other DBs
NCBI-GeneID:
134517434
NCBI-ProteinID:
XP_063195002
LinkDB
All DBs
Position
6:41493198..41514152
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AA seq
998 aa
AA seq
DB search
MRRAAAALQAGCRAAMSYEHRRDWGRGRGGDGGAAGSSSSSAGGHGGRGGGRGRHPSHLK
GREIGLWYARKQGQKSKETDRQQRAVVRMDERREEQIVQLLNTVQTKNEKEQEAMSWWSG
DEEGPTPEQPTKVKPDTEKAPVKQRPVLEKTFLDRDVEYLFEKNDQDTDLDEQLKEDLRK
KKSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIE
RGKGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYC
TTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNIRLDLKVILMSATLN
AEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPENTDRRPRWKKGFMQGHVSRP
EKEEKEEIYRERWPDYLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGA
ILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIA
TNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGH
CYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLA
INHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDP
FVIPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSSNT
LQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSF
SKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCL
LFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENPHPVDWN
DIKSRDTAVLTAIIDLITTQENEGARNYAPRFQSERYS
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgggcggcggcagcgctgcaggccgggtgccgggcggccatgagctacgagcac
cgccgcgactggggacggggccgcggcggcgatggcggggccgctggttcctcctcctcc
tcggcggggggacacgggggccgcggtggcggccgggggcgccaccccagccacctcaag
ggccgcgagatcgggctgtggtacgcgcggaagcagggccagaagagcaaggagacggac
cggcagcagagagctgttgtgcgtatggacgaacgcagggaagagcaaattgtgcagttg
ttgaataccgtccaaactaaaaatgaaaaggagcaagaagccatgtcttggtggtctggg
gatgaagaaggacctactccagaacagcccacaaaagtgaaaccagatactgaaaaagct
cctgtaaaacagaggccagtcttggaaaaaacgtttcttgatcgcgatgtggaatatctc
tttgaaaaaaatgaccaagatactgatttagatgagcaacttaaagaagacttaagaaag
aagaaatcagatcctagatatattgaaatgcagagattccgagagaaactcccgtcatat
gggatgagacaggaacttgtaaaccttataaacaataatcgagtaactgtgataagtggt
gaaactggttgtggaaagacaacccaagttacacagttcattctggatgattacatagag
cgagggaaggggtctacatgcaggattgtttgtactcagcctaggaggatcagtgctatc
tcagtggctgagagagtcgcggctgaaagggcggaagcatgtggtaatggcaagagtaca
ggataccaaattcgtctacagagtcggttaccaaggaaacaaggttcaattttatactgt
accacaggaattgtcctacagtggctccagtcagataagcacttgtccagcattagtcac
gtagtccttgatgaaattcatgaaagaaatcttcagtcggatgttttaatgagcattatt
aaagatcttctgaatattcgtttggatctgaaagtaatactcatgagtgctactttaaat
gcagagaagttctcggagtattttgataattgtccaatgattcacatacctgggttcacc
ttccctgtagtggaataccttcttgaggatgtaattgagaagttgaggtatactccagaa
aacacagaccgtcggccacggtggaagaaaggtttcatgcaaggacatgtaagcagacca
gaaaaagaagaaaaagaggaaatctacagggaacgatggccagactatttaaggcagctg
cggggcaggtattcagcaagtactatagatgccttggaaatgatggatgatgacaaggtc
gaccttgatcttatagcagcacttatcagacacattgttttggaagaagaggatggtgcg
attctagtgtttcttccaggctgggacaacattagcactttgcatgatctcttgatgtca
caagtcatgtttaagtcagataggtttattatcatacctttacattcattgatgcctact
gttaaccagactcaggtttttaagaagaccccgccaggagtaaggaaaatcgtgattgct
accaacattgcagagactagcattacaatagatgacgtcgtgttcgttatagatggtgga
aaaataaaggaaactcactttgacacacagaacaacattagcacaatggcagcagagtgg
gttagtaaagctaatgccaagcagaggaaaggtcgagcaggaagagttcagccaggccac
tgctatcatctatacaatggattgcgtgctagccttctagatgattatcagttaccagag
atcttgaggacacctttggaagaactctgtttacaaatcaagattctaaagcttggtgga
attgcttattttctgagcaaactaatggatccaccatctcgtgatgctgtaatgttggcc
ataaatcatctaatggagctgaatgctttggacagacaagaagaactgactccactgggt
gtccatttagcacgattaccagtcgaaccgcatattggaaaaatgatcctttttggagct
ttattctgctgcttagatccagtacttacaattgcagctagcctcagcttcaaagaccct
tttgttattcctctgggcaaagagaaagtagcagatgcaagaagaaaggaactgtcaaag
aacactaaaagtgatcatctaactgtggtgaatgctttcacgggctgggaagagactcgg
cgtcgtggtttcagaactgagaaagactattgctgggaatatttcctgtcttcaaatacg
ctgcagatgctgcataacatgaaaggacagtttgctgagcatctccttgcagctggattt
gtgaacagcagagaccccaaggatcccaaatctaataccaactcagataatgagaagttg
ctcaaagcagtcatttgtgctggtttatatccaaaagttgcaaagatccggccaagcttc
agcaaaaagagaaaaatggtgaaagtttgcaccaagacagatggaacagttaatattcat
cctaaatcagttaatgtggaagaaacagagttccattataactggcttgtgtaccatttg
aagatgagaactagcagtatttatttgtatgattgtacagaggtctccccatactgtctc
ttgttctttggaggagatatatccattcagaaggataaagatcaggataccatcgctgtg
gatgaatggattgttttccagtctccagcaagaatagcgcacttggttaagaatttaaga
caagagcttgatgatcttctacaagaaaaaatagaaaacccacatcctgtggactggaat
gatattaaatccagggatacagcagtactgacagctattatagacttaatcacaacacag
gagaatgaaggtgccagaaactatgctccacgattccagagtgaacgctatagttga
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