Chroicocephalus ridibundus (black-headed gull): 134517454
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Entry
134517454 CDS
T10910
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crid04040
]
134517454 (TRPC1)
Ion channels [BR:
crid04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134517454 (TRPC1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
134517454
NCBI-ProteinID:
XP_063195048
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Position
6:complement(49157455..49180954)
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AA seq
781 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEPVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHNYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNGEKDCAGIFCEQQSNDTFHSFIGTCFALFWYMFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccttgtaccagagcgcggacccgtccgcctcggcctcgccgaacaagctgctg
gcgctgaaggacgtgcggcaggtgaaggaggagaccaccctggacgagaagctcttcctg
ctggcctgcgacaaaggtgactattacatggttaagaaactcttagaggaaaacagttcg
ggcgaaatgaacataaattgtgtggatgtgcttggacgaaatgctgttaccataaccatt
gaaaatgaaaacttggacatactacagcttcttttggattatggctgccagtcatcagat
gcacttttggtggctattgactcggaagtggtgggagctgttgacattctccttaatcac
cggccaaaaagatcctccagaccaaccattgtaaaactaatggaacgtattcagaaccca
gagtactcaacaactatggatgtggcacctgtcattttagctgctcatcgtaacaactat
gaaattctcaccatgctattaaagcaagacatatcattacccaaacctcatgctgtaggc
tgtgaatgcacactgtgtactgcaaagaacaaaaaagatagtctacgacattccaggttt
cgtcttgacatttatcggtgtttggccagtcctgctttaatcatgttgacagaggaggat
ccgatcctgcgagcttttgaactcagtgcggacttgaaagaattaagccttgttgaggtt
gaattcagaaatgattatgaggagctagctcaacagtgcaaaacctttgctaaagatttg
cttgctcaagcacggaattcacgggagctggaagttattctgaatcacacatctagcgat
gaacctgtagacaagcgaggattgttggaagagaggatgaacttaagtcgcttaaaactt
gcaatcaagtataatcaaaaagagtttgttgctcagtctaactgccagcagtttctaaac
actgtatggtttggacagatggcaggctatcgacgcaagcacacatgcaagaaaattttg
accgttttgatggttggcattttctggccggttctatctctgtgttacttgttagctcct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcacggagct
tcatatttcacatttctattattacttaatttgtactcccttgtctacaatgagaataag
aagaatacaatgggaccagcccttgagagaatagactatcttctgataatatggctaatt
ggaatggtgtggtcagatgttaaaagactctggtatgatggtttggaagacttcttagaa
gaatcccgtaatcagcttagttttgtcatgaattccctgtatttggcaacttttgctctc
aaagtggttgcccataacaagtttcacaattatgctgaaaggaaggactgggatgcattc
catcctaccctagtggcagaaggtctttttgctttcgctaatgttcttagttacctgcgt
ctcttcttcatgtacacaaccagctctattctgggaccactccagatttcaatggggcag
atgctacaagattttggaaaatttctgggcatgtttcttcttgtcttgttctcattcaca
attggattgacacaactttatgataaaggatttactgtaaatggagaaaaggactgtgcg
gggattttctgtgaacaacagagcaatgacacattccattcgtttattggcacatgtttt
gctctgttctggtacatgttctccctggcacacgtagcaatctttgtcacacgttttagc
tatggtgaagaattacagtcttttgtgggtgctgttattgttggtacctacaatgtggtg
gttgtgatagtattaactaaactccttgtggcaatgcttcacaaaagttttcagctgata
gcaaatcatgaagataaagaatggaagtttgctcgtgccaagctttggcttagctacttt
gatgacaaatgcacactacctccacctttcaatgttattccctctcccaagactatctgt
tatcttttcaacagtctcagtaaatggatctgctctcatacatcaagtggcaaagtgaaa
cgtcagaacagcctaaaggaatggagaaatctgaagcaaaagagagatgagaattatcaa
aaggtgatgtgttgcttagtccaccgttacttgacttccatgaggcagaagatgcaaagc
acggatcaggcaactgtggaaaacttaaatgaactgcggcaagacttgtcaaaattccga
aatgaaatgagagacctgcttggctttcgaacttctaaatatgctatgttttatccaaga
aactaa
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