Chroicocephalus ridibundus (black-headed gull): 134517473
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Entry
134517473 CDS
T10910
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134517473 (SORCS3)
Membrane trafficking [BR:
crid04131
]
Endocytosis
Others
Others
134517473 (SORCS3)
Endosome - Lysosome transport
134517473 (SORCS3)
Endosome - Golgi transport
134517473 (SORCS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
134517473
NCBI-ProteinID:
XP_063195080
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Position
6:complement(13243003..13550839)
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AA seq
1214 aa
AA seq
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MEKGTNCFPTCHTVFLAWTWLLLLCWCCTGAEITCRPCSSPSPSWPSSSSRLRQEQRQPP
PLPGGLRSWPGGRTRGSAGAAAAAEPLPGGEPGGRAGPRGATLRSAGAGGGAPGGRGPAA
ARSRRSSEGRRALPAGGGRGLPAAEGQRGGGRAQPRGPPEEGRAPRLRGAEELRLSSTTF
ALTGDAAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEKLNDKVG
LKTVLSYLYVSPTNKRKIMLLSDPEIESSILISSDEGATYQKYRLNFYIQSLLFHPKQEE
WILAYSLDQKLYSSMDFGRKWQLMHEQVTPNRFYWSVTGLDKEPDLVHMEAQTADGHTHY
LTCRIQECSETKRSGPFSRSIDISSLVVQDEYIFIQVTAGGRANYYVSYRREPFAQIKLP
KYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSRGLEGNI
IIDLYEVAGIKGIFLANRKIDDQIKTFITYNKGRDWRLLQAPDTDLRGDPVVCQMPFCSL
HLHLQLSANPYTSGSISSKETAPGLLVATGNIGSELSYTDVGVFISSDGGNSWRQIFEEE
YNVWFLDWGGALVAMKHTSVPIRHMWVSFDEGRSWSKYSFTSTPLFVDGSLVDPGIETQI
MTVFGHFSLRSEWQLVKVDYKSLFSRRCNKDDYQTWHLHNQGEPCVMGERKIYKKRKPGA
QCSLGRDYSQSVVSEPCVCGQGDFECDYGYERHSNNQCVPAFWFSPSSLSKDCSIGQNYL
NSTGYRRIVSNNCTDGLRERYMAKMEKCPGKAPRGLHILTTDGKLVTEQGHNATFIILME
EGDLQRTNIQLDFGDGIAVSYANFSPVEDGIRHVYKSAGIFQVTAYAENSLGSDTAVLFL
HVVCPVEHVHLSVPFVAIRNKDVNITAVVWPSQAGTLTYFWWFGNSTKPLITLESSISYT
FAVEGMNTVTVQVAAGSTLIQDTKEVAVHEYFQSQLLSFSPNLDYHNPDIPEWRQDIGKV
IKRALAQVTGIPDEQILVAVFPGLPTSAELFILPHKNTTERRKSSEADLEQVVEILFNAL
NQNLVQFELKPGVEVIVYVTQLTLAPLVDSSTGHSSSAMLMLLSVVFVGLAVFLIYKFKR
KIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSEFTDPEELMDKELDTRVMGSISTIA
NSESTKEIPNCTSV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggactaactgctttccgacctgccacaccgtttttctcgcctggacatgg
ctcttacttctctgttggtgttgcaccggcgccgaaataacttgcagaccctgctcgtct
ccatcgccctcctggccgtcctcctcgtctcgccttaggcaggagcagcgacagccaccg
ccgctgccgggaggattacggagctggccgggcggccgaacgcggggctcggccggggcg
gcggccgccgcggagccgctgccgggcggggagccggggggccgtgcggggccgcgggga
gcgacgctccgttcggcgggggcgggcggcggcgcgcccgggggccggggcccggcggca
gcgcggagccggaggagcagcgaggggcggcgggcgctgccggcgggcggcggccggggg
ttgcccgcggccgaggggcagcgcggcggcggccgggctcagccccgcgggccgccggaa
gaggggagagcgccgcggctgcgaggggcagaggagctgaggctgagcagcaccaccttc
gcgctcacgggggatgcggcgcacaaccaagccatggtgcactggtccgggcacaacagc
agcgtgattctcattctgacaaagctgtatgacttcaacttgggaagtgttacggagagc
tcactgtggaggtcaacagactatgggactacctatgaaaagctaaatgacaaagtaggc
ctgaagactgtgctgagctacctttacgtcagtcccactaacaagaggaagatcatgctt
cttagtgatccagagatcgagagcagcatcctcatcagctctgatgaaggggctacctac
cagaagtaccgtctgaacttctatatccagagcttgctcttccaccccaagcaggaggag
tggatcttggcctacagtctggatcaaaagctgtacagctccatggacttcggaagaaaa
tggcagctcatgcatgagcaggtcactccaaacaggttttactggtcggtgactggtttg
gataaagaacctgaccttgtgcacatggaagcccagacagctgatggacacacccactat
ttgacctgtcggatccaggagtgctcggagaccaaaaggagtgggccattttcgcgctcc
attgacatcagctcccttgttgttcaggatgaatatatcttcatccaggtgacagctggt
ggaagagcaaactactatgtgtcgtacagacgggagccttttgcacagattaaattgccc
aaatactctcttcctaaggacatgcatattatcagcacagatgagaatcaggtgtttgca
gctgttcaagagtggaaccagaacgatacgtacaacctgtatatctcggacacccgaggg
gtgtacttcaccctggccttggaaaacgtgaaaagcagtcgaggactggaggggaatatc
atcattgacctttatgaggtagcagggatcaaaggcatattcctggctaacaggaagata
gatgaccaaatcaagactttcattacctacaacaagggcagagactggcgtttgctgcag
gctccggacactgatctaagaggggatcctgtagtttgccagatgcccttttgctcattg
cacttacatctgcaactctcagcaaatccatacacttcaggaagcatttccagcaaagag
acagctcctgggctgctggtggcaacaggcaatattggctctgagctttcctacactgat
gttggcgtgttcatctcttctgatggtggaaattcctggaggcagatcttcgaggaggaa
tacaatgtgtggtttctggactggggaggggcgctagtggccatgaagcacacgtcagtg
cccatccggcacatgtgggtgagttttgatgaaggaagatcctggagtaaatacagtttc
acatcaacaccactttttgtggatggatcccttgtggaccctggtatagagacccagata
atgacagtttttgggcacttcagtctccgttctgaatggcagctggtcaaagtggactac
aagtctctcttcagtcgaaggtgtaacaaagatgactaccaaacctggcatctgcacaat
cagggggagccttgtgtcatgggagagaggaagatctataaaaaacgcaagcctggagcc
cagtgctccctaggtcgggactattcccaaagtgtggtgtctgaaccatgtgtctgcggt
caaggggactttgagtgtgactatgggtatgagaggcacagcaacaaccagtgtgtccca
gccttctggttcagcccgtcctccctgtccaaggattgcagcatcggtcagaactacttg
aacagcactgggtaccgaaggattgtgtctaacaactgcacagatggcttgagagagagg
tacatggccaagatggagaaatgccctggaaaagcaccccgaggactgcacatcctcact
actgacggaaaattggtcacggagcagggacacaacgccaccttcatcatccttatggaa
gagggtgatctccaaaggacaaacattcagcttgattttggagacggcattgcagtatcc
tatgctaatttcagccctgttgaggatggcatccgccacgtgtataagagtgctggaatc
tttcaggtgacagcatatgcagagaacagcctgggctctgacactgctgtcctcttcctg
catgtggtctgtccagtggagcacgtccatctgagtgtcccctttgttgctatcagaaac
aaagacgtcaacattactgcagtagtttggcccagccaggcaggcacacttacctacttc
tggtggtttggtaacagcaccaagcccctcatcaccctggagagcagcatctcgtacacc
ttcgctgtggaggggatgaacaccgtcactgtgcaggttgctgcgggcagtaccctcatc
caggacaccaaggaggtcgcagtgcacgagtatttccaatctcagctcctctcgttttct
cccaacttggactaccataaccctgacatccctgaatggagacaagacattggcaaagtc
atcaagagagctctagcgcaggtgaccggtatccctgatgaacagatcttggtagctgta
tttcctgggcttcctacttctgctgaactcttcatactgccccataaaaacacaacagag
aggaggaaaagcagtgaggctgatctggagcaagtggtagaaatcctgtttaatgctctc
aaccagaacctggtccagtttgaactgaagcccggtgttgaagtcattgtgtatgttact
cagttaacattagcaccccttgtcgactccagcacgggtcacagcagttcagcaatgctg
atgttgttgtctgtggtgtttgtaggcttggctgtctttttaatctacaaattcaagagg
aaaatcccttggattaacatctatgcccaagttcagcatgacaaggagcaggaaatgatt
ggctctgtcagccaaagtgaaaacgcccccaaaatcactctaagcgagttcacggaccct
gaggagctgatggacaaagagctggacacacgagtgatgggaagcatctcaacaattgcc
aacagtgaaagcacaaaggaaatccccaactgcactagtgtttaa
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