KEGG   Chroicocephalus ridibundus (black-headed gull): 134517477
Entry
134517477         CDS       T10910                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04382  Cornified envelope formation
crid04510  Focal adhesion
crid04512  ECM-receptor interaction
crid04518  Integrin signaling
crid04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:crid00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134517477 (COL4A3)
   04518 Integrin signaling
    134517477 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134517477 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134517477 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    134517477 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crid04147]
    134517477 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:crid00536]
    134517477 (COL4A3)
Exosome [BR:crid04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   134517477 (COL4A3)
Glycosaminoglycan binding proteins [BR:crid00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   134517477 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 134517477
NCBI-ProteinID: XP_063195085
LinkDB
Position
6:complement(50574524..50640521)
AA seq 1674 aa
MAGRGCPSRLAPLLLLALLWPGRAAGAESCVCKGKSPCFCDSMKGNKGEKGFPGAPGPPG
LRGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGLPGLPGFSGPPGLPGEPGTVGPPGRSG
VPGCNGTKGDQGFPGPPGRRGAPGIPGIPGIKGEKGCPAEVYNQGYGAKGDPGLPGMPGL
QGAQGAQGYPGELGPQGPPGPSGMPGKAGPPGPKGLMGLKVIGTKGRKGDTGLTGPPGPP
GTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPVGFTGPDGDSQSEKGDRGEPGAQGKPGKE
GAPGPPGLPGQKGEQGKPGAAGRQGAKGMKGNTGPPGACGRTEYYDYVVGEKGDEGPPGP
PGPKGQRGMPGPQGPPGDAGRPGVTRPGLRGPPGFPGPKGIKGEKGQTGLCVVGPPGLPG
ITGKPGSVGLPGPPGEPGRVTFRTGLPGLPGEPGCTGPPGPPGDIGMKGDEARVCTDCSY
IPGIPGRPGSPGPHGQDGMPGREGTTGPKGSPGSPGAPGFPGAQGPPGFRGDQGHKGSKG
EPGYVYPEGPKGERGDPGARGDKGRKGSSGFLGRPGSKGSKGSKGEKGLAGSKGDRGLPG
LPGSLGLPGEMGLPGLPGYGPQGIRGFKGSKGIPGPPGLPGEAGLKGETSRITPLPALPG
PQGPQGPDGLPGPPGVPGRAGARGQQGDSGHPGPTGDTGFPGLGFPGNPGPKGNKGLAGG
RGSPGCEGKIGDPGRAGNLGQPGEKGDPGMVIPGEPGRLGSPGGRGIPGSKGDTGFPGLP
GLPGSAGRDGDDGLRGDHGSPGVPGDPGFPGKPAECLIGLPGLPGGQGATGPPGGRGLQG
SKGKLGPPGLSIPGIYGKPGEPGLIGLQGNTGLPGPKGQSGRPGISGVPGLRGEPGIMGL
LGIPGPPGTIGRPGIPGIRGSSGIPGLKGRKGFLGAKGEPGDKGFPGPSETLVGIGNKGE
RGLKGVQGRMGLRGEKGDAGVQGPPGLDGSEGVPGLPGVKGFMGLPGVPGRQGFPGAPGN
KGDMGIPGPNGDKGSPGFPGPSGDPGPPGYGGFPGDKGDPGYPSAGPPGEPGPKGDPGPP
GVLGSKGEKGSQGHPGHKGVPGPHGIRGETGSAGIPGKLGPPGDIGVKGQQGCPGQQGIT
GPPGAAGDPGRKGLVGERGNQGQDGMPGPPGVKGEPGAPGRGIPGLRGVPGHRGIKGDMG
LPGFPGPPGMKGHQGDQGPIGPPGLVGLPGFQGATGMAITGQKGNRGIAGADGRPGAPGF
PGPPGLPTLSMKGIKGVRGADGIPGSTGPAGDTGPPGPKGIEGRPGYPGARGDPGFLGFP
GVKGEKGNRGPPGPQGVEGPRGPKGQRGPPGVPGRIFSIPGSKGPPGLPGIPGAPGDQGI
QGIPGLQGPKGLKGLPGSFGHPGHPGLPGPKGDRGFPGQRGEPGLIGFPGLQGLPGSPGS
IIAGPTRRGFIFTRHSQSTKIPSCPHGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQR
FTTMPFLFCSTNDVCSFASRNDYSYWLSTATVMPVDMAPISGRALEPHISRCVVCEGAAM
VIAVHSQTTAVPPCPEGWLSLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIEC
HGRGTCNYYTNSYSFWLASLNPRRMFRRPLSQTLKAGELENIISRCQVCMKRPV
NT seq 5025 nt   +upstreamnt  +downstreamnt
atggctggcaggggctgccccagccgcctggcgccgctgctgctgctcgccctgctgtgg
ccgggccgcgccgcgggggctgagagctgtgtatgcaaaggtaaaagtccctgcttttgc
gatagcatgaaaggtaataagggtgaaaaaggctttcctggtgctccaggtccacctggt
cttagaggctttcctggtccagaagggcctccaggaccacagggaccaaagggttctcca
gggcttactggcttagttgggcccaaaggcatacgaggactcccaggactacctggattt
tcaggtcccccaggccttccaggtgaaccgggaactgttggtcctcctgggcgctcgggt
gttccaggatgcaacggcacaaagggcgatcaaggttttccaggtcctccaggtagaaga
ggtgctccaggcattccaggtattcctggcatcaaaggagagaaggggtgccctgcagag
gtatataaccaagggtatggtgcaaaaggtgatcctggattaccaggaatgcctggactt
cagggtgcccagggtgctcaaggatatccgggagaacttggaccacagggccctccagga
ccttcaggcatgccaggaaaagcgggacctcctggacctaagggtcttatgggactgaaa
gtaataggaaccaaaggaaggaagggtgacactgggttaactggaccccctggaccacca
ggaaccgttattgtgacattaagtggaccagacaacatgacggacttgaaaggagagaaa
ggagaaaaaggatcaagaggacttccaggaccagtggggtttacagggccagatggtgat
tctcaaagtgaaaagggtgaccgaggagaacccggagcacagggtaaacctggaaaagaa
ggtgccccgggtccacctggcttaccgggacaaaagggtgaacagggcaaaccaggagcg
gctggcaggcaaggagctaaggggatgaaaggaaacactggtccgcctggagcttgtggt
cgaacagagtattatgattatgtggttggtgaaaaaggagatgaaggaccccctggacct
ccaggaccaaaaggtcaacgtggcatgcctgggccacagggtcctcctggagatgctggt
agaccaggtgtgacaagacctggtctgagaggtccccctggatttcctgggccaaaagga
ataaaaggagagaaaggacaaactggcttgtgtgttgtaggccctccaggactacctggt
attactggcaaacctggttctgttggattaccaggtcctccaggagaaccaggtagagta
acgtttcgaacaggcctgccaggacttcctggagagccagggtgcacaggacctccggga
cctccaggagatattggcatgaaaggtgatgaagctcgcgtgtgtactgattgcagctat
attccaggaatacctggtcgtcctggttctcctgggccacatggccaggatggcatgcct
ggtagagaaggaacaacaggtccaaaaggttctccaggttctccaggagcaccagggttt
ccaggagctcaaggacctccaggttttagaggagatcaaggacataaaggatcaaaaggt
gagccaggatatgtgtatccagaagggccaaaaggtgagagaggagatccaggggccagg
ggagacaaaggaagaaaaggttcaagtggatttctgggaagacctggctctaaaggatcc
aagggctctaaaggtgaaaagggattggctggttcaaaaggagatagaggactccctgga
ttgcccggtagtcttggtcttcctggagagatggggcttcctggattgccaggatatgga
ccacaaggaataagaggcttcaaaggctctaaaggaatacctggtccacctggattacct
ggagaagctggtctgaaaggagagaccagtaggataactccattacctgcattgccagga
cctcaaggacctcaaggaccagatggtttacctggacccccaggagtgcctggtagagct
ggagcaagaggccagcaaggtgattcaggacatccaggcccaacaggtgacacaggcttt
ccagggcttgggtttcctggaaacccaggtccaaaaggaaataaaggacttgcaggaggc
agagggtcaccaggttgtgaaggaaagatcggagatccaggccgagctggaaacctagga
caaccaggagaaaagggtgacccaggcatggttattcctggagagccaggtagactgggt
tcaccaggaggtcgtggcattcctggctcaaaaggtgatactggatttccaggacttcca
ggcctaccagggagtgctggacgtgatggtgatgatggcctaagaggagatcatggctca
cctggagttcctggagatccaggttttccagggaaacctgctgaatgtcttattggcctg
ccaggtttgccaggtggccagggagctacaggcccaccaggaggaagaggtttgcaaggt
tcaaaaggaaaacttggccctcctggcttgagtatcccgggaatctatggaaaacccggg
gaacctggattaataggtcttcagggaaatacaggattacctggtcccaagggacagtct
ggaaggccaggaatctctggtgtgccaggcttgaggggagagccaggtataatgggcctg
ttaggaattcctggaccccctggcacaattggaagaccaggcatcccgggtatcagaggt
tcttctggcatcccaggactaaaaggaagaaaagggtttcttggagcaaaaggtgaacca
ggtgataaaggttttcctggaccatctgagaccttggttggtattgggaataaaggagaa
cgaggcttaaaaggagttcaaggaagaatgggtctaagaggagagaaaggagatgccggt
gtgcaaggtcccccaggtcttgatgggtctgaaggagtacctggtctaccaggcgtcaaa
ggatttatgggtcttccaggggttcctggaagacaaggattcccaggtgcaccaggaaac
aaaggggacatgggaattccaggtccaaatggagacaaaggatctcccggctttccagga
ccatcaggtgaccctggtccaccaggctatggtggctttccaggtgacaagggagatcct
gggtacccgtccgctgggcctccaggagaacctggtccaaagggagatccaggccccccg
ggagttttgggcagcaaaggagaaaaaggatcccaaggtcatccaggtcataaaggagta
ccaggaccacatgggatcagaggggaaactggaagtgcaggaatcccagggaagcttgga
cctcctggagatattggtgtcaaaggacagcagggctgcccaggacaacagggcattaca
ggccctcctggtgctgctggagaccctggaagaaaaggacttgttggtgaaaggggtaat
caaggtcaggatggtatgcctggtcccccaggagtaaagggagaaccaggagcaccaggg
agaggaatccctggccttcgaggtgttcctggtcatagaggaatcaaaggggacatggga
ctgcctggttttcctgggccaccaggtatgaaaggtcatcaaggtgatcaaggacccatt
ggacctcctggcttagtggggttacctggattccaaggcgcaacaggcatggcaattact
ggccaaaaagggaatagaggtattgctggtgcagatggaagaccaggtgctcctggtttt
ccagggcctcctggtcttcccactctcagcatgaaaggaatcaaaggcgttagaggggca
gatggcataccagggtcaacaggcccagccggcgacactggtcctcccggtccaaaagga
attgaaggtcgaccaggttatcctggtgctagaggggaccctggatttcttggattccca
ggtgtaaaaggagaaaagggtaatcgaggaccccctggaccacaaggtgtagaaggacca
aggggaccaaagggccagcgtggtccacctggagtccctgggagaatattctccatccca
ggaagcaagggtcctcctggactgccaggaatcccaggagcaccaggtgatcaaggaatt
caagggattcctggactacaaggacctaaaggattaaaaggtttaccaggaagttttggt
catccaggtcacccaggactgcctggtccaaaaggagacaggggatttccaggacaaaga
ggagaacccggactgattggctttccaggtctacaggggttacctggatcaccaggttct
atcattgctggtccaacaagaagaggttttatctttacccggcatagtcaatcaacaaag
attccttcatgcccacatgggacatcgcagatctatgttggctattcactgctttttgta
caaggaaatgaacgagcacatggacaagatcttggaacagctggtagctgcttgcagaga
tttaccaccatgccattcttattctgtagcaccaatgatgtttgtagttttgcttctcgc
aatgactattcatactggctgtcaactgcaacagtaatgccagtagatatggcaccgatt
tctggcagggcactagaaccccatataagcaggtgtgttgtctgtgaaggagctgcaatg
gtaatagcagttcacagccaaacaactgcagttcctccgtgtccagaaggctggctatct
ctctggaagggtttttcttttgttatgtatacaagtgccggctcagaagcttctggccaa
gcattggcatctcctggatcttgtttggaagaatttcgagctatcccattcatagagtgc
catggcagggggacgtgcaactactacacaaattcctacagcttctggttggcatcatta
aatccaagaagaatgttcaggagacctctgtcacagactttgaaagcaggagaactagaa
aatatcatcagccgctgtcaggtctgcatgaagagaccagtctaa

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