Chroicocephalus ridibundus (black-headed gull): 134517730
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Entry
134517730 CDS
T10910
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134517730 (AFF3)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134517730 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
MACPF
Motif
Other DBs
NCBI-GeneID:
134517730
NCBI-ProteinID:
XP_063195641
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Position
1:73418735..73757194
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AA seq
1239 aa
AA seq
DB search
MDSFDLALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQEDGAFNTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQTSLPKPDEHLVADSRPPP
PPPISSTTSSTPAALPAQQSKSAAMGWQKTGHNAASDGQQRASKHGHRSLESHKGDFKLA
NQKPSLEKLKRYASSPTSSSSSSSNTAQQSSLRATLGDNVNRVQQPAKLNCSSDGGAQAQ
ERPAKHGGGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKLPAETTKSY
RGVPSNKPDSARTKSKIAKFSIPKQEEDSGTGDNSCIEEILREMTHSWPPPLSAIHTPGK
AEQSKFPFPNKESQQGSTGHSNTRKSDVEPKSPEKSATHTSMLEDDLKLSSDEEENDQQA
AQRSALRVLSDSLVVPQSNTRASGLSSKGSSSSSSSESETSSESDSESESSSSESDGSKP
SHYSSPEPEPPSSNKWQLDKWLNKVTPHKAPILTHHDGTALEAHPYYGRVKAERQESEKT
PATGPVEHRSGEGRATTTVTAAIGDGPRPRTANKAPGSKGGRQKSPPAADGGPSRRAAGK
KAPRRAERTSAGDGPHCPGVEEPPSSHSFLESTAGEAPRARPGGGSSGGGCRAGHRRGEP
RSAAAGEKRRARGPSKTAPKSKEFIETESSSSSSSSDSGSESEREERPLPKAPLTAGAEP
RAKDAGTSAASKPHGGCSAFGSINARTSSEIAKELEEQFYTLVPFGRNELLSPLKDSDEV
KSLWVNIDLALLSRIPERLPEEPLAMSAGASQAASLPQGSSADPPAEKGLPKSRRKRKCE
NEEECRDIKKTHLERESSSRLAASAHSITTANHCNMNENSLAIPINKNEKMLRSPVSPLS
DASKHKYSNDDLTSSSRPNGSSLLPSISSSKKHKGEIQSQPHPGDLNKAIHINSENVLCN
KPQSQTESWSPLSSTPRDCRRTKLIFDDMPRNADYFMQEAKRKKHKADAMVEKFGKALNY
AEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHSGPNATPEDKQLAALC
YRCLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAAQNPSPWGASGKSTGTPSPMSPSP
SPVSSVGSQGSTGAPSPSPIISIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENRD
FFNDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSAHLS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagctctcctgcaggagtgggacctcgactctctctgtgtctac
gagccggatagaaacgtactgcgaaggaaagaatgggaaaggagaaatcaggaggcccag
caggaggatggcgcgtttaacacgagttactccctcttcagtgaaccatacaagactaac
aagggggatgagctctcgaatcgcatccagaatacgctgggcaactatgatgaaatgaaa
gacttgttaactgaccgatcaaaccagagccatcttgttggggttccaaaacctggggtt
cctcagacatctctccccaagcccgatgaacatcttgtagcagactcgagaccgccgcct
cctccgcccatttccagcactacttcttccacaccagcagccctacctgcccagcagagc
aaaagcgccgcgatgggttggcagaagaccgggcacaatgccgcttcagatggccagcag
agagcgagcaagcacgggcaccggtcactggagtcacacaagggtgacttcaaactggca
aaccaaaaacccagtttggagaaactaaaacgctatgcatcgagtcccacctcctcctcc
tcttcctcctccaacactgcccagcaaagctcactgagggccacgctaggagacaatgtc
aacagagtgcagcagccggcaaagctcaactgtagctcggatggaggagctcaagcgcaa
gagaggccagcaaagcatggtggcggacactgcgtccaaaacttcccgccctctcttgct
tcgaagcccagtctggttcagcagaaaccaacagcttatgtaaggccaatggacggtcaa
gaccaggctcctgatgagtctccaaagctgaagttaccagcagagacgaccaagtcatat
aggggagtgccttctaacaagcctgattcagccaggaccaagtcaaagatagccaagttc
agcattcctaagcaagaagaggacagtggaacaggagataacagctgcattgaagaaata
ctgcgggagatgacccattcatggcctccaccactgtcagctattcacacaccagggaag
gcagaacaaagcaagtttcccttcccaaacaaggagtcgcaacagggatctacaggacac
agcaatacaaggaaaagtgatgtagagccaaagagtccagagaaaagcgcaacccataca
tcaatgctagaagatgacctcaagttaagcagcgatgaagaggagaatgaccagcaggca
gcacagagatctgctctccgcgttctatctgacagcctggtggtgccacagtccaacacc
cgagcctcgggactctccagcaaggggtcgagcagcagcagctccagtgaatcagagacc
agctcagagtctgactcagagagcgagagcagctccagcgagagtgacggcagcaaaccc
tcacattactccagcccagagcctgagccaccctcatctaacaagtggcagctggacaag
tggctgaataaagtcaccccgcacaaagcacccatcctgacccaccatgacggcacggcg
ctggaggcccatccctactacggacgcgtgaaggcggagcggcaggagagcgagaagacc
ccggccaccggcccggttgagcaccgcagtggggagggccgtgccaccaccaccgtcacc
gccgccattggggacggaccgcggcccaggaccgccaacaaagccccgggcagcaaaggc
ggccggcaaaagtcaccccctgcagctgacggcgggccttcgaggcgggcggcggggaag
aaggcaccgcggcgggctgagaggacctctgccggggacggcccccactgccccggggtg
gaggagcctccttcaagccacagctttctggaaagcactgctggagaggcgccgagggcc
cggcccggcggtggcagcagtggcggtggctgcagagcagggcatcgccgaggggagccc
cgctcggccgcggcaggcgagaagcgtcgggcccggggaccgagcaaaacggcgcccaaa
tccaaggagttcattgagaccgagtcttcgtcctcgtcatcctcctccgactcgggctct
gagtcggagcgggaggagcgcccactgcccaaggcgccgctcacagccggggccgagccg
cgggccaaggacgcggggaccagcgccgccagcaaaccccacggcggctgcagtgccttt
ggctccattaatgccaggactagtagtgaaatagcaaaggagctggaggaacagttttac
accctggttcctttcggtaggaatgagctcctgtctcctctgaaagacagtgatgaggta
aagtcgctgtgggtcaacattgacttggctcttttgtccaggattccagagcgtttgccc
gaagagccgctggccatgagcgccggagcaagccaggcggccagcctcccgcagggtagt
agtgctgacccccccgcagagaaaggtttaccgaaatctagaaggaaacgcaagtgtgag
aatgaggaagagtgcagagacatcaagaagactcacttagagcgagagagttcttcacga
ttagctgcctctgcccacagcatcacaacagcaaatcactgcaatatgaatgaaaatagc
ttggcaataccaataaataaaaatgagaaaatgcttcggtcacccgtctctcccctctct
gatgcatcaaaacacaaatactccaacgatgatttaacttcctccagcagacctaatggc
agcagtctattaccttccatctcctccagcaaaaaacataagggtgaaatccagtcgcag
ccacatcctggagacttaaataaagcaattcacatcaattcggaaaatgttctctgcaat
aagccccagtcccaaacagagtcttggtcacctctgtccagcacacccagggactgcaga
aggacaaagcttatctttgatgatatgccacgcaatgcagattactttatgcaggaagct
aaacggaagaagcataaagcagatgcaatggtggaaaagtttggaaaggcactgaattat
gcagaagcagcactatcgtttattgagtgtggaaatgcaatggaacaaggcccaatggaa
tctaaatccccttatacaatgtattcagaaacagttgaactcatcaggtatgcggtgaga
ctaaaaacccactcaggccccaacgccactccagaagacaaacagctggcagcattatgt
taccgctgcctggcccttctgtactggaggatgttccgactcaagagagaccacgcggtc
aagtattcgaaagcgcttattgagtatttcaagaattcgtcaaaagctgcccagaaccca
tctccttggggtgccagtggaaagagcacaggaactccatcacccatgtcgcctagccct
tctccagtcagctctgtaggatcccaggggagcacaggggccccttccccatctcctatc
atcagcatcccacagcggattcatcagatggctgccaaccacgtcagcatcaccaacagc
atcctgcacagctatgactactgggagatggctgacaacctggccaaggaaaacagagat
ttttttaacgacttggatgcattgatggggcctatcaccttgcacagcagtatggagcat
ttagttcagtacactcaacaaggacttcactgggtgcggaatagcgcccacttgtcataa
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integrated database retrieval system
