Chroicocephalus ridibundus (black-headed gull): 134517867
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Entry
134517867 CDS
T10910
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134517867 (JMJD1C)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
134517867 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
134517867
NCBI-ProteinID:
XP_063195917
LinkDB
All DBs
Position
6:complement(34443740..34610455)
Genome browser
AA seq
2534 aa
AA seq
DB search
MAVETRPELVGKRFLCVGGGGGEEPPESGRWRAGVIRAVSQRDSHSHDLAVYVEFDDLEW
EKREWVKVYEDFAAFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYNSIT
AVEFLVDKQLDFITEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQGP
YSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFLDDV
VHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAAPKQNSHQHQQQ
RNTRPNKRKGSDSSMPDEEKVKEERYDYIGRGENPKNKNKHFLSKRRKPEEDEKKLNMKR
LRTDNISDYSESSDSEISNKRLTDSSSEQNSENELKSKNTSKVNGEEGKSQTIGGVEQTL
TDRRSPWDEIQEDKKREETERLKSSALDQQEKSSLHAAEQPTPYEQNAKDPHVQECNAEK
KHTAELKNEQFVPGPPTPKCVVDITNENNSEKESQDNAASTFGLQTVQKIESHSSDLKQQ
FANANFLEARKQEADQSWVSSAVNKTDLIQPGVVKTLSVNEHLNPEKEKVQYGSFMSSLN
VASLAEESKLHKQSPVPDSVKSKPSASVDHPKTKSPDVKPKFTQSSDTVKSKVSSQNSHA
TGLTRSANKTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQETGTN
HISPYLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINTHPLSTASH
HSVHHPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQ
AHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNTEASLRRNTPSPWLHQ
PTPVTSADSLGLLSHIPVRPSSADPLRPLKLTTHSSPPLSKSIVEHHKEELERKAFIEPL
RSVTTAPVKTELEQSRTQPAKESHMHRHFADPMLNQLPRPPQETGERLSKYKEEHRRILQ
ESIEVAPFTAKIKALEGERENYSRVTSLSSSPKSHSVKYDKDAERSVSELYKMKHSVPQS
LPQSNYFTTLSNSVVNEPPRSYPSKEASSAYVDKQTNCASTAASPQSLPSYISSLSKPPP
LIKHQPESEGSSSKVPEQLSQSVQSHSVNSFRSDSRSPTQLSISSSNTLRSMPALHRAPV
FHPPVHQNLEKKESSYSSLSPPTLTPVQPVNAGGGKIQELQKPPTLVPEPKEAQTVYKGT
SEQNLSEIWKSNNAPNNEKMDWHVERMSGKSQSATASVIVRPPSSTKYDSVPVMQSASKD
RVSERSSAVTNQADCLKTAEARETGRIILPNMNSDSARTQYEKKFPAVSQGSILHAVTPT
TTIICSTKTDVTASAATTTSVSSWGSSEVTYSLSNTVLACAPLECTASRAASQGVAQAQE
CKVSTPAPVTPAAGKTGNSAQPSSGFSTSTDFVHLKKHKAALAAAQFKSSNTSETESNSV
KNQTFSTSLSLDSTIVCNTINKANSVGSGQTSQTSQPNYHTKLKKAWLTRHSEEDKNTNK
KENSGNSVSEIIKPCTVNLIASTSNDLQNNIDSKILADKFAKEDKHPRRKAKRTYESGSE
SGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKEKSKLKLQ
SGSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEPT
HSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYIL
DIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFV
VCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIREK
FEIKSHCQCTSKQSTQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKSETNG
NTSPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEEKDQDNLE
SQNCKSSPPASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASGKSGRTMP
NILDDIIASVVENKIPPNRAPKINVKSEIKDEPKDDRKCIQDDCSKLYSDIQYSWICDKH
VLWLRDHKNNNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCK
DSIISNTNVKEFWDGFEDVSKRQKIKNGETALLKLKDWPSGEDFKAMMPARYEDLLKSLP
LPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNIL
VYVGIAKGNGVLSKSGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFL
QKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTVIQFLGDAIILPAGALH
QVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRA
LKIHEGEMEDMDEN
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggagacgcggccggagctggtggggaagcggttcctgtgcgtcggcggcggc
ggtggcgaggagccgccggagagcgggcgctggcgggccggggtcatccgcgccgtctcc
cagcgggactcccacagccacgacctggcggtgtatgtggaatttgatgaccttgaatgg
gaaaagcgagaatgggttaaagtttatgaagattttgcagccttcttggtggagtaccag
ctggtctgggcaaaaagaaaggacccaagccagactcagggatcaaagatcaaacaaatt
caatggcctgcattgacattcaagcccttggttggaaaaagtgtatacaattcaattact
gcagtagaattccttgtggacaaacagctggattttataactgaagatagtgcctttcag
ccctatcaggacgacgtagacagtctaaacccagttctcagggataacccgcagttacat
gaggaggtaaaagcctgggtaaaggaacaaaaggttcaggagatttttatgcaaggtccc
tactccttaaatggttatagggtgagagtgtacagacaggattccgccacccagtggttt
actggtatcattactcatcatgatctcttcacccgcactatggttgttatgaatgaccag
gtgttagaacctcagaatgttgatccttctatggttcagatgacctttctagatgatgtt
gttcactctttgttgaaaggtgaaaatattggcatcacttcacgccgacggtctcgttcc
aaccagaacagcaacacagtccacggtcattatacgcgtgcacaagcaaatagtcccaga
ccagcaatgaattcccaaactgcagcaccaaaacagaattctcaccagcaccagcaacag
aggaatactcggccaaataagaggaaaggctctgatagcagcatgcctgatgaagagaag
gtgaaagaagaaagatatgattacataggtcgaggagaaaaccccaaaaacaaaaataaa
cacttccttagtaaaagaagaaaacctgaagaggatgaaaaaaagttaaatatgaagaga
ctgcggacagacaatatctcagattactctgagagcagtgactcagaaatttcaaataaa
agattaacagattcgtcctcagagcaaaattcggaaaatgagttaaaaagcaagaacact
tcaaaggtaaatggagaagaaggaaaatcccaaactattgggggagtagaacagacacta
acagataggcggtctccatgggatgaaatacaggaggataaaaaacgcgaagagacagaa
agactgaagtcatctgccctagatcagcaggaaaaatcttcactccatgcagcagagcag
ccaacaccttatgagcagaacgccaaggatccacatgttcaagagtgcaatgcagaaaaa
aaacatactgcggaattaaaaaatgagcagtttgtacccggacctcctactccgaaatgt
gttgttgacattactaatgaaaacaactctgaaaaggagagccaggataatgctgcaagt
acctttggtttgcaaacagttcagaaaatagaatctcacagcagcgatttaaaacagcag
tttgcaaatgcaaatttccttgaagcaagaaaacaggaagctgatcaaagttgggttagc
agtgctgttaacaaaacggatttgatacaacccggagttgtaaaaacgttatcagtaaat
gaacacttaaatcctgaaaaagaaaaagtgcagtatggctcctttatgtcttcgttaaat
gtagcttctctagcagaagagagtaaactgcataagcaaagtccagtccccgattctgtg
aagtcaaaacctagtgcttcagttgatcatcctaaaacaaagtcacctgatgttaagcct
aaattcacccaatcttccgatactgtgaagtctaaggttagttcccaaaacagccatgct
actggattaacaaggtcagccaataaaactgatcatgatttgcctaggtctagtttccat
ccagttccagctagagttagtgctctagaagctactaaaagtcctcttatcattgacaag
aatgaacatttcacggtgtacagggaccccactctgattggacaagaaacaggaactaat
cacatttcaccttatttgcatcagcataattatcctctgcattcctcatcccaccgaacc
tgtttaaatcccaacgctcatcatcctgcattaactggttcatcccatctgctcgctggg
tcttcggctcaggctcccttgtccgctattaacactcacccccttagtaccgcatctcac
cattctgttcatcaccctcatctacttcctgcagtgttacccggagtgcctgctgcctcc
ttgctgggtggccacccgcgactagagactgctcatgctagcagcttaagccatttggca
ttagcacaccagcagcagcaacagatgttacaacaccagtctccacatcttcttggacaa
gctcatccttctgcttcctataatcagctagggctttatccaattatttggcagtatcca
aacggaacacatgcttactcaggactcggtctgccctcctccaaatgggtccacccagaa
actcctgttaacacggaggcttccttgagaaggaacactcccagcccgtggttacaccag
cccacccctgtgacctcagctgacagccttggtttactgagtcacattcctgtgcgaccg
tccagtgcagatccccttcgacctctgaaactgacaacgcattccagcccgccgttgtcc
aaaagtattgtagagcatcacaaagaagaactggagaggaaggcatttattgaaccttta
cgttctgttacaactgcaccagtaaagacggagctagagcaaagcagaacgcagccagca
aaggagagccatatgcacagacattttgcagatccaatgttgaaccagctgccaaggcca
ccacaggagactggggagcgactgagcaaatacaaagaagaacacagacggatactccaa
gaaagtattgaagttgctccttttacagctaaaataaaggcactggagggagagagagag
aactattccagggttacgtccttatcttcaagtcccaaaagccattcagtaaaatatgac
aaagatgctgaacgctctgtctcagaactgtacaaaatgaagcattcggttccacagagt
ttgccacagagtaactatttcaccaccttgtctaatagtgtagtaaatgaaccaccaaga
tcgtacccatcaaaggaagcttcaagtgcatatgttgataagcagactaactgtgcttca
acagcagctagtccccaatccctcccctcttacatttcttctctttcaaaacctccaccg
ttaattaagcaccaacctgagagcgaaggctcttcgagcaaggtacctgagcagctttca
cagtcagtgcagtctcactctgtaaattcttttcgaagtgacagcaggagccctactcag
ttgtcgatctcgtcttcaaatacactccggagtatgcctgccttgcatagagcccccgtg
tttcacccccctgtgcaccagaacctggagaagaaggaaagtagctatagcagcctttca
cctccgactctaactcccgttcagcccgttaatgctggtggtggcaaaatacaggagttg
cagaaaccaccaactttagtacctgagcctaaggaagctcagactgtttacaagggcact
tctgaacagaatttatcagaaatatggaagtccaataatgccccaaataatgaaaaaatg
gattggcacgttgaaagaatgagtggaaagtcacagtccgctacagcatctgttattgtg
cgtcctccttctagcacgaaatacgatagcgtaccagtaatgcagtctgcttccaaagat
cgggttagtgagagatcttcagctgtgacaaatcaagcagattgcctgaaaacagcggaa
gccagggagactggaagaatcattctgccaaatatgaactcagacagcgctcgcacacag
tatgaaaagaaatttccagctgtctcgcaaggcagcattctgcacgctgtcacccctacc
acaactatcatctgcagtaccaaaacggatgtcaccgcatcagcagcaacgactaccagc
gtgtcgagctggggtagttcagaagtgacgtactccttatcgaacacggtgttggcctgc
gcgcctctggagtgtacggcctcgagagccgcgagtcagggggtggcgcaggcccaggaa
tgcaaggtcagcactccagctccggttacacccgccgctggcaagacaggcaatagtgct
cagcccagctcgggattctccacctctaccgactttgtccatttgaaaaagcacaaggca
gccttggctgcagctcagtttaaaagtagtaacaccagtgagacggagtccaactctgtg
aaaaatcagacattttcaacctctctctccctagacagtactatcgtctgtaatacaata
aacaaagcgaactctgtaggcagtgggcaaacttcccagacgagtcagccaaactaccac
actaaactgaaaaaggcttggctaacaagacattcggaggaagataaaaacactaataaa
aaagagaattcagggaacagtgtctcagaaattattaagccatgtactgtcaatttgata
gcttctacatcaaatgatttgcaaaataacatagatagtaaaatcttggcagataagttc
gcgaaggaagataagcaccctaggagaaaagcaaaacgaacttacgagtctggctctgaa
agcggagactctgatgaaagcgagagcaagtcagagcaaaggactaaacggcagcccaag
ccaacttacaaaaagaaacaaaatgatttgcagaaaaaaaagggcgatacagaggaagaa
gtaaaaccgaatggtgttcttagcaggagtgccaaagaaaaaagcaagctgaagttacag
agtggcagtaacagcactggtatacctcgctcagtgttaaaagactggcgcaaagtaaag
aagctgaagcaaacgggagagtccttcttgcaggatgattcttgctctgaaataggacca
aatttgcaaaaatgcagagaatgtaggttaataagaagtaagaaaggagaagaaccaact
cactcaccagtattttgtagattttactactttcggcggttatcttttagtaagaacgga
gtggttaggatagatggtttttcctctcctgatcaatatgatgatgaagcactgagttta
tggacgcatgaaaactacgaagatgatgagctggacctagaaacttctaaatacatccta
gatatcataggtgataaattttgtcagttagtaacatctgagaaaacagccatgtcctgg
gtgaaaaaagacgccaaaattgcatggaagagagcagtgagaggagtccgtgagatgtgt
gatgcatgtgaagccacattatttaacattcattgggtctgccaaaaatgtggatttgtg
gtctgcctagattgttacaaggcaaaggaaagaaaaagttctagagataaggagttatat
gcctggatgaagtgtgtgaagggacagcctcatgatcacaaacacctgatgccaacacag
attattccaggctctgttttgacagaccttctagatgctatgcacaatattagagaaaaa
tttgaaattaaatcccattgtcagtgtaccagcaagcagagcacgcaagctggcaaactc
cctgcaatgaatggtgtgtctcaggttttgcagaatgtcctcaaccacagtaataaaatt
tctctgtgcatgcctgagtctcaacagcagaacactcctcaaaagtctgagacaaatggt
aatacaagtccaaggagcgatgtaagcacagacagcaagttaacaccacctgaatcccag
tcaccgctgcattggttagctgatcttgcagagcagaaagccagagaagaaaagaaagag
aacaaagaatgtccttctggaaaacattcaaaggaagagaaagaccaggataatttggag
tcccaaaactgtaaaagctcccctcctgcatcccagaacaatgagcagggctcaacctta
cgagatttattaactacaactgcaggcaaactgcgtctaggttctacagatgctggtatt
gcttttgctccagtttactctacaggaacagcaagtggcaagagtggaaggactatgcca
aacattcttgatgacataatagcttcagtagtagaaaacaagattccaccaaatagagca
ccaaagataaatgtaaaatctgaaataaaagatgagccaaaggatgacagaaagtgtatt
caggatgactgcagtaaactgtacagtgatattcagtattcgtggatctgcgataagcat
gttttgtggctcagagaccataaaaacaacaacaactggaagctcttcaaggagtgctgg
aaacaaggaaggcctgttttagtgtctggtatgcataagaaaatgaacttcagcctgtgg
aaagctgagtcaattagtctagattttggaaaccagcaagctgatattttgaattgcaaa
gacagtattatttcaaacaccaatgtcaaggagttctgggatggttttgaagatgtttca
aaacggcagaaaataaaaaatggggaaacagctctactgaaactgaaagattggccttct
ggtgaagatttcaaggctatgatgccagcaagatatgaggacttactaaaaagtttaccc
ttgcctgaatactgtagtccagaaggaaagctaaacttggcttctcatctgccaggattt
tttgtccgtccagatttgggaccccgactatgcagtgcatatggtgtggctgctacaaaa
gaccacgatataggaaccacaaatctccatattgaagtttctgatgtcgtgaacatcctt
gtttatgttggcatagcgaaaggaaatggagtactttccaaatcaggagttctgaagaag
tttgaagaggaagatttggatgaccttttaaggaagcggttgaaagactcaagtgaatta
cctggtgctttatggcacatttatgctggcaaagatgctgacaagataagggagtttctg
caaaagatagcaaaagagcaaggcttagaagttttaccggagcacgatccaatacgtgat
cagagttggtatgtgaacaaaaaacttcgccaaagacttcttgaagaatacggagtaaaa
acctgtacggttattcagtttcttggtgatgctattattctaccagcaggagcacttcat
caggtgcaaaattttcacagctgtgttcaagtcactgaagactttgtgtctccagaacat
cttgtacagtcatttcacttaacacaggagctgaggctgtcaaaggaagaaatcaattat
gatgacaaactgcaggtgaaaaatatcttgtatcacgcagttaaagaaatggtgagagct
ttgaagattcatgaaggtgaaatggaagatatggatgaaaactaa
DBGET
integrated database retrieval system
