KEGG   Chroicocephalus ridibundus (black-headed gull): 134517870
Entry
134517870         CDS       T10910                                 
Symbol
TRIM42
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Brite
Protein phosphatases and associated proteins [BR:crid01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     134517870 (TRIM42)
Ubiquitin system [BR:crid04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    134517870 (TRIM42)
SSDB
Other DBs
NCBI-GeneID: 134517870
NCBI-ProteinID: XP_063195926
LinkDB
Position
6:complement(54155330..54164371)
AA seq 717 aa
MQLMKRERDENGHLCSTWQCCSNCHYLTCPSRKXLYWHFLFASEPNCSCFPHPYEDKPCP
CCHCSCAEHANCWRCCCSCLNDPGCKCCCCGGENSACQYYESKCCRSSAHEPHQSRTPGT
CSVNTVLRFRTRNNASVLTPERKVSRHTFRDQFACPLCKQLFLHPLMVPHNHXCEKCVTK
SKTKAEVTEDLXVIVCPVCSKAHCLPNINKIQLKYMRRHSFLRWRFDHSERPVYFETCRE
RKVASKRCRTRGINNCNECLHLNHSKNGAQDHIFTKAHTEDHEWHCLLHSNSDLSEYCLD
DHEPTCGFCRNSLHNDHENISLAVACSRXAASLFDTIAKFRKVHTGVDNDLMEVILLKKI
FETFKDTKRKEIRNGFLKLRMVLQELEKKMMELLENVELKKQKEISEYLNDTSNQLSHTD
GLIQYSKQALKEESQVFLQSAHRLVKEIENATPSIFQSSPHVREDPXRKLQLSFDELFST
LQGLVPSLSGIKQTESKAEKYLYSFNPEIMVPRHSSTQKSKQATSFRSTYLNSVFDLGVL
PKDIVRXPSSNPPHHPTQSNEVCVYQDSACENARKERKYQVFNFSSLEPIDNESVPVLEL
VVIYQTAVYLRPAEIYWTCPTEHVDFFEVEFYEVARIGPGNIVQTQLADQLSKIQLXNLE
VHNLDPNTEYLFKVHAVNASCXEEWSEICKIIASEEYGKIRDVGEAEEYSGRSAYTV
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgcaattaatgaagagggagagggatgaaaatgggcatctctgttcgacctggcagtgc
tgctcaaactgccattacctgacttgcccaagcagaaagnncttgtattggcacttcttg
tttgccagtgagccgaactgcagctgtttcccacatccatatgaagacaaaccttgccca
tgctgccattgctcatgcgcagagcatgcaaattgctggcggtgctgctgctcttgttta
aatgacccaggctgcaaatgctgctgctgcggtggagagaactcagcatgtcagtattac
gaaagcaagtgctgcagaagctctgcccatgaaccacatcagtcaagaacaccaggaacc
tgttcagtaaataccgtgttaagatttagaactagaaataatgcatctgtccttacacca
gaaaggaaggtctccagacacactttccgtgaccagtttgcctgtccactgtgtaagcaa
ttgtttctccacccacttatggtgccgcacaatcatnnttgtgagaagtgcgtaactaaa
agcaagaccaaagctgaagtaactgaagacttanacgtcattgtatgcccagtgtgtagc
aaagcacattgcctccctaacataaacaaaattcagctgaaatatatgcgcagacacagc
tttctgaggtggagatttgaccacagtgaaagaccagtctactttgaaacttgcagggag
agaaaagtggcaagcaaaagatgtagaacacgtggaataaataattgtaatgaatgtctg
catttaaatcatagcaagaatggtgctcaagaccacattttcaccaaagcacatacagaa
gatcatgagtggcactgcttactccacagcaactcagacctatctgaatactgtctggat
gaccacgaaccgacctgtgggttctgcaggaactcactgcacaatgaccacgagaatatt
tccttggcagttgcatgttcaaggtaggcagcttccctctttgatacaattgcaaaattt
agaaaagttcatactggagttgataatgatctaatggaagttatcctgttaaaaaagatt
ttcgagacctttaaggacaccaaaaggaaggagatcagaaatggattcttaaaattacgt
atggttcttcaagaactagaaaagaagatgatggagttgcttgaaaatgttgaacttaaa
aaacagaaagaaatttcagaatacctaaatgatacgtccaatcagctatcacatacggat
ggccttattcaatactctaaacaggctcttaaggaggaaagccaagtgtttctgcaatct
gcacaccgcttagtgaaagaaatagaaaatgcgactccttccattttccaatctagtcca
catgtaagagaagatccctgaagaaaacttcaactcagctttgatgaacttttctccact
ttacagggacttgtcccatcccttagtggaataaagcagacagaaagtaaagcagaaaaa
tatctgtattcttttaacccagagataatggttccaaggcattcaagtactcagaaatcc
aagcaagcaacatcgttccgaagcacatatttaaattccgtgtttgatttaggtgttctg
cctaaagacattgtcagatgaccaagctctaaccctccccatcatcctacacagagtaat
gaagtgtgtgtgtaccaggattcagcttgtgaaaatgcaagaaaagaaagaaaatatcag
gtttttaacttttcaagtctagaacctatagacaatgaatccgtaccagtcctagaactt
gttgttatataccagactgctgtttacctgaggcctgctgaaatttactggacttgtccc
acagaacatgtggatttctttgaggtagagttttatgaagttgctcgtattggtcctggt
aacattgtccagacacaactagctgaccagctaagcaaaatacagctgtagaaccttgag
gtacataatctggatccaaatacagaatatctttttaaagtccatgctgtcaatgcaagt
tgttaagaagaatggagtgagatctgtaagataattgcttcagaggaatatgggaaaatc
agagacgtgggagaagcagaagagtattcagggcgttctgcatacaccgtatag

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