Chroicocephalus ridibundus (black-headed gull): 134517950
Help
Entry
134517950 CDS
T10910
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
crid00536
]
134517950 (COL13A1)
Glycosaminoglycan binding proteins [BR:
crid00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134517950 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
134517950
NCBI-ProteinID:
XP_063196100
LinkDB
All DBs
Position
6:36755750..36820689
Genome browser
AA seq
696 aa
AA seq
DB search
MGIPGRPGLKGQPGEKGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGQK
GEMGAAGPRGQPGPPGQKGEKGQCAEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQGQAGI
QGPPGPPGPPGPTGPAGPEGTPGQPGPIGPPGKVGEPGKPGRDGKGLPGPPGPKGDPGIQ
GYPGRKGEVGESGLPGAHGLPGATGPKGEKGDAGIKGERGMPGLPGRHGTKGAPGVATAG
VKGEPGTPGEKGDPGVPGRMGPPGLPGKRGQRGEKGRTGDPGLPGLPGTKGEKGNAENAL
VGGKGEPGPPGLPGPPGPKGEAGDIGRPGAAGSQGEKGEPGSPGDQGPMGPRGPKGEPGK
DEMMDYDGNISEALQEIRTLALMGPPGLPGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRG
KPGEMGPPGPHGLPGKDGPPGIKGEPGHIGVTGEKGDKGDPGQAGSPGLDGPTGEKGEQG
DQGMPGPSGLPGPIGLPGLTGEKGEPGEHGDKGNPGESISGPPGPQGPPGPPGLQGLPGP
KGEAGIDGMKGEKGAQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVSGPAGPKGERGS
KGDPGVIGPMGPAGLPGLQGLPGDKGIRGERGKKGSRGSKGDKGDQGAPGLDAPCPLGLR
GFKGEKGEPGLPGLDGLDAPCPLGEDGLPVQGCWNK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctgggcggccgggactaaaagggcaacccggagagaagggtgctccagga
gaagcaggcatgtctatcatcgggccccgtggtccacccggacagcctggaacaagaggt
tttcctggattcccgggccctattggcttggacggcaaaccgggtcatcctggacagaag
ggggagatgggtgctgcaggtcccaggggacaacccggacccccaggacaaaaaggagaa
aagggtcagtgtgcagaatacccacacaggctgttgcctctcctcaattcagtgcggctg
gctccacctccggtcataaagagacgcactttccagggtgaacaaggacaagcaggaatc
caaggtcctccagggcctcctggcccaccagggcccactggaccagctggacctgaagga
accccaggacagcccggaccaattgggccacctggcaaagtaggagaacctgggaagcct
ggcagagatggaaagggcttacctgggcctcctggaccaaagggagaccctgggattcag
ggataccctggcagaaagggtgaggtgggtgagtcaggcctgcccggtgcacatggcctc
cctggagctactggccccaagggtgaaaaaggggacgctggcataaagggggagagaggc
atgccagggctgccaggaagacatggcactaagggcgctcctggggtggccaccgcaggg
gtgaagggcgagcccgggactccaggagaaaagggagatcccggagtcccagggaggatg
ggtcccccaggtttgccagggaagagggggcagcggggtgagaagggacgaactggtgac
cctgggcttcctggactccctggcacgaagggagagaaaggaaatgctgagaatgccctg
gtgggaggtaaaggagaacctggccctcctggtctgcctggaccccctggaccaaaggga
gaagctggtgacattggccggcctggtgctgcggggtcacagggggaaaagggggaacct
ggttcaccaggagaccagggacccatgggcccaaggggccccaagggagagcctgggaag
gatgagatgatggactacgacggtaatatcagtgaagctctccaggaaatacgaactttg
gccttgatgggacccccagggcttccaggtgtggctggacctccagggccaccaggacag
aagggtgaaattggcttgccaggtcctccaggccatgatggagaaaagggaccacggggc
aaacctggagaaatgggcccgcctggccctcatggactgccaggaaaggatggaccacct
ggaataaagggagagccaggtcatatcggggtcacaggagaaaagggtgataaaggagat
ccaggacaagctggctcgccgggtcttgatggccccactggagagaaaggtgaacaaggt
gaccaagggatgccaggaccgtcaggattgccaggtcccattggacttccaggattgaca
ggagagaagggtgagcctggggagcacggtgacaaaggaaatccaggagaatcgatatct
ggccctcccggaccccaaggcccaccaggacctccaggtcttcagggcctcccaggacca
aagggggaagcagggattgatggaatgaaaggagagaagggtgcccagggtgaaaaagga
gacagagggccactgggattacctggtgcttcaggtttagacggcaggcctggaccaccg
ggtactccaggaccaattggtgtttcaggaccagcaggaccaaaaggagaaaggggcagt
aaaggagatcctggagttataggaccaatgggaccagcagggcttcctggtttacaaggt
ctacctggtgacaaaggcatccggggggagaggggcaagaaaggctctagagggtctaaa
ggggataagggagaccaaggagcgcctggattagatgcaccctgtccgttgggtcttcga
ggttttaaaggcgagaagggtgagccggggttacctgggctggacggcctggatgcccca
tgcccattgggggaagacggccttccagttcaaggctgctggaataagtga
DBGET
integrated database retrieval system
