Chroicocephalus ridibundus (black-headed gull): 134518017
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Entry
134518017 CDS
T10910
Symbol
RNF13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134518017 (RNF13)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134518017 (RNF13)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134518017 (RNF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
Neur_chan_memb
DUF7027
Prok-RING_4
zf_RING_Vps8_fungal
SID-1_RNA_chan
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
134518017
NCBI-ProteinID:
XP_063196272
LinkDB
All DBs
Position
6:complement(42511951..42557819)
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AA seq
381 aa
AA seq
DB search
MLLSIGMLMLSATQIYTILTVQLFAFLNLLPVEADILAYNLENGTQTFDDLPARFGYRLP
AEGLKGFLINSKPENACEPIAPPPLRDNSSGAFIVLIRRLECNFDIKVLNAQRAGYKAAI
VHNVDSDDLISMGSNDIEILKKIDIPSVFIGETSANSLKEEFTYEKGGHVVLIPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKIPVHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSSQ
EENEVSENTPLLRPLASVSTQSFGALSESHSHQNMTESSEYEEDDNDNIDSSDAENGINE
ESVVVQLQPNDEREYRVANTV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgtcaataggaatgctgatgttgtctgccactcaaatatacactattttgact
gttcagttatttgctttcctgaatctcttgcctgtggaggcagatattttagcatataac
cttgaaaatggaactcagacctttgatgatctacctgctagatttggctacagactgcca
gcagaaggcttgaagggattcctaataaattcaaaaccagagaatgcatgtgagcctata
gccccacctccactgagagacaactcatctggtgcttttattgtgttaattcgaaggctt
gagtgcaactttgatatcaaggttttaaatgcacagagagctggatataaggcagctata
gttcacaatgttgattctgatgacctcataagcatgggatccaacgacattgagatttta
aagaagattgacattccgtctgtctttattggtgagacttcagctaattctcttaaagaa
gaatttacttacgaaaaggggggccatgttgtgttaatcccagagttcagtcttcctttg
gagtactacttaattcctttcctaataatagtagggatctgtcttattctcatcgtcata
tttatgatcacaaaattcgtgcaagacagacacagagcaagaaggaatcgtcttaggaag
gatcagcttaagaaaattcctgtacataaatttaagaaaggagatgaatacgatgtatgt
gccatttgtctggatgaatatgaggatggcgacaagctcagaatccttccatgttctcac
gcgtatcactgcaagtgtgtggacccgtggctgacaaaaacaaaaaaaacatgtcctgta
tgtaagcagaaagtggtcccttctcagggggactctgactctgaaacagacagtagtcaa
gaagagaacgaagtatctgaaaacacccctctgcttagaccattagcctcagttagcact
cagtcgttcggggctttgtcagaatctcattcccatcagaacatgaccgagtcctcagaa
tatgaggaggatgacaatgacaatatcgatagcagtgatgcagaaaatggaataaacgaa
gaaagtgtagtggttcaactacagcccaatgacgaaagggagtacagagtggcaaatact
gtttga
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integrated database retrieval system
