Chroicocephalus ridibundus (black-headed gull): 134518103
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Entry
134518103 CDS
T10910
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crid04040
]
134518103
Ion channels [BR:
crid04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
134518103
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FraC
New_glue
Chlamy_scaf
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
134518103
NCBI-ProteinID:
XP_063196415
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All DBs
Position
7:complement(21184810..21287833)
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AA seq
2013 aa
AA seq
DB search
MEQSVLVPPGPDSFQYFTRESLAAIEQRIAAEKAKNSKQDRKDDDENGPKPNSDLEAGKT
LPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSQLNSTIG
ENGTLVNSTVTPFDWKGYIEDESHFYFLEGQSDALLCGNSSDAGQCPEGYTCVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLIL
AVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAVTASAESREPSA
GGEAGGLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRK
GFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFAD
DEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVVS
LVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTETEMRKRISSSFHVSMDFLEDPALRER
AMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDL
AITICIVLNTLFMAMEHYPMTDEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGW
NIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRVLCGEW
IETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDNEMNNL
QIAVARMQKGIDYVKRKAREFIQKAFVKKQKALDEIKPLEDLNNKNSCISNHTTVDLSKD
HDYIKDVNGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEF
SSESDLEESKEKLNSSSSSEGSTVDIGLPAEEQPEAEPEEAQEPEACFTEGCVRRFKCCQ
VSIEEGRGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLE
YADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF
YYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQVATFKG
WMDIMYAAIDSRDVLQQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIMILICL
NMVTMMVETDDQSKEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVI
LSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPI
LNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVAT
EESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKVQLIAMD
LPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLKRK
QEEVSAVIIQRAYRRHLLKRTVKQASFIYNKNKTEGGAGLGLKDEILIDKLNENSFTEKT
DITASTAVCPPSYDHVTRPVKEKHEKEDKGGQK
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccaatacttcactagagag
tctcttgcagctattgaacaacgcattgctgcagaaaaagctaagaattctaaacaagat
cgtaaagacgatgatgaaaatgggccaaagccaaacagtgatttggaggcaggaaaaacg
cttccgtttatatacggcgacatacctccaggaatggtgtctgagcctttggaagacatg
gacccatactacatcaataaaaaaacctttatagtattgaataaagggaaggcaatcttc
cgattcagtgccacctctgccctgtacattttaactcccttcaatcctcttagaaaaata
gctattaaaattttggtacattcattattcagcatgcttatcatgtgcactattttgacc
aactgtgtatttatgaccatgagtaaccctccggactggacaaagaatgtagagtatacg
ttcactggaatttacacatttgagtcactcataaaaatcattgcaagaggcttttgctta
gaagattttacttttcttcgagatccatggaactggcttgatttcactgtcattaccttt
gcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagta
ttgagagctttgaaaactatttctgtaatcccaggcttgaagactatcgtgggagcccta
attcagtccgtgaagaagctctcggatgttatgatcctgactgtgttttgtctgagtgta
tttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcagtgg
cctccagaaaattttactctggaaacaaatatcacttcccagctaaacagcaccataggt
gaaaatggtacattggttaattcaacagtgactccatttgactggaaggggtacattgaa
gatgaaagtcatttttattttctggaagggcaaagcgatgctctgctttgcggaaatagt
tctgatgctgggcagtgcccagaaggatatacatgtgtgaaagctggtagaaaccccaat
tatggctacacaagttttgacaccttcagctgggctttcttgtcactatttcgcttgatg
actcaagacttctgggaaaatctttatcaattgacactgcgtgctgctgggaaaacatac
atgatattttttgttctggtgatttttctgggctctttctacctgatcaacttgatcttg
gctgtggtcgccatggcctatgaagaacagaatcaagcaaccatggaagaggcagaacag
aaagaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagcagctcag
gcagcagcagtggcagcagcagcagtaacagcatccgcggagtcaagggagcccagcgct
gggggagaagcaggagggctctcagaaagttcctcagaggcatcaaaactgagctcaaag
agtgcgaaagagaggagaaacagaaggaaaaaaagaaaacagaaagaacagtctggagga
gaggaaaaagatgaagatgaatttcacaagtctgaatcagaagacagcatcagaaggaaa
ggtttccgattatctattgaaggcaatagattgacatatgaaaagaagtattcttctcca
catcagtctttgctgagcattcgaggctccctgttttctccacggcgtaacagcagaaca
agtcttttcagcttcagaggtagagcaaaggatataggatcagaaaatgactttgctgat
gatgagcacagcacttttgaagacaatgatagcagaagagattctctctttgtgccgcgc
agacatggtgaacggcgcaacagtaacattagtcaggccagtaggtcatccaggatgctg
gcagtgtttccagtgaatgggaagatgcacagcactgtggattgcaatggggtggtttcc
ttggttggtggaccatctgttcctacatcgcctgttggacagcttctgccagaggtgata
atagataaaccagctactgatgacaatggcaccactacagaaacagaaatgaggaagaga
atatcaagctctttccatgtttcaatggacttccttgaagatcctgctttaagggaaaga
gccatgagcatcgctagcatcctcacaaacactgtggaagaacttgaagaatcaagacag
aaatgcccaccatgttggtataaatttgcaaatattttcttgatctgggactgcagccca
cattggttaaaagtaaaacatatcgtcaacttagtggtaatggacccatttgttgacctg
gctattacaatttgcattgttttaaatacactctttatggctatggaacattatccaatg
actgatgaattcaataatgtactttcagttggaaatctggtcttcactggaattttcaca
gcagaaatgtttctcaagataattgcaatggatccttactattatttccaggaaggctgg
aatatttttgatggttttattgtaacccttagcttggttgagcttggtcttgcagatgtg
gaaggactgtcagttcttcgatcattcagattgttacgagttttcaaactggcaaaatct
tggccaacactaaatatgctgattaagattattggcaactcagtgggggctttggggaac
ctgaccctggtgctggccatcattgtcttcattttcgctgtggttgggatgcagctgttt
gggaaaaactacaaggaatgtgtctgcaaaatcgcaagtgactgtgttcttccacgctgg
cacatgcaagatttttttcactcttttttgattgtatttcgagtgctgtgtggagaatgg
atagaaacgatgtgggactgcatggaggttgcaggccaagccatgtgccttacagtcttc
atgatggtcatggtgattggaaacctagtggtactgaacctatttttggccttgctgttg
agctcatttagtgcagacaaccttgccgttacagacgatgacaatgaaatgaataatctc
caaattgctgtagcaagaatgcagaagggcatagactatgtgaaaagaaaagcacgtgaa
ttcatccaaaaagcttttgttaaaaaacaaaaagctttagatgaaatcaaaccacttgaa
gatttgaacaacaaaaatagctgtatttctaaccatacaactgtggatctaagcaaggac
catgactatattaaagatgtgaatggaacaactagtggcataggcacaggcagcagtgtg
gaaaaatacataattgatgaaagtgattacatgtcattcataaacaacccaagtctcact
gtgaccgtgcccattgctgtgggtgaatccgactttgaaaatctaaacacagaggaattt
agcagtgaatcagacctggaagaaagcaaagagaagttaaattcgtctagttcatccgaa
ggtagcacagttgatatcggacttcctgcagaagaacaaccagaagctgaacccgaagaa
gcccaggagccagaggcctgcttcacagaaggctgtgtacgaaggttcaagtgctgtcaa
gtaagtatagaagaagggagaggaaagcagtggtggaaccttagaaaaacctgcttcagg
attgtcgaacacaactggtttgagactttcattgtctttatgattctcctcagtagtgga
gctctggcttttgaagacatatatattgaacagcgtaaaactatcaagaccatgctggaa
tatgctgataaggtcttcacttacatcttcattctggaaatgctgctgaagtgggtggcc
tatggctatcaaacatactttactaatgcctggtgctggctggacttcctgattgtcgat
gtctctttggttagcttaacagcaaatgcattgggttactctgaacttggtgccattaag
tcccttaggacactaagagctttgagacctctaagagctttgtcacgatttgaaggcatg
agggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgtgcttctcgtt
tgtcttatattctggctaattttcagcatcatgggagtaaatctgtttgctgggaagttc
tactactgtgttaacaccacaactgatgaaaggtttgaagtcgaccaaatcaacaatttt
agtcagtgcgaggaactcataaaaaacaatcaaagtgcccgatggaaaaacgtgaaagta
aactttgataatgtaggatttgggtatctatctttacttcaagtagctacatttaaaggc
tggatggatattatgtatgcagcaattgactcaagagatgtattacagcaacccaagtat
gaagacaacctgtacatgtatttgtattttgtcatctttataatttttgggtcttttttc
accctgaacctgttcattggtgtcattattgataacttcaatcagcaaaaaaagaagttt
ggaggtcaagacatatttatgacagaagagcagaagaaatactacaatgcaatgaaaaag
ctgggatccaaaaagccacaaaaacctataccaagaccagggaacaaattccaaggcatg
gtctttgattttgtgacacagcaagtctttgacattagcatcatgattcttatttgtctt
aacatggttaccatgatggtagaaactgatgaccagagtaaagaaatggaaaatatttta
tactggataaacctggtgttcattgtccttttcactggagaatgtgtcctgaaattaatt
tcacttcgccattactactttactataggatggaacatttttgattttgtagttgtcatt
ctctcaatagtaggtatgttcttagctgagatgattgagaaatattttgtgtcccccaca
ctattcagagtgatccgacttgccagaatcggtcgaatcctgcgtctcattaaaggcgct
aagggaatccgcactctgctttttgctttgatgatgtctcttcctgctttgttcaacatt
ggtctgctgctgttcctggtcatgtttatctatgcgatatttggcatgtccaactttgcc
tatgttaagagggaagctgggattgatgacatgttcaactttgaaacgtttggcaacagc
atgatctgcctctttcaaattaccacatctgctggctgggatggtttgctcgccccaatt
ctgaacagtggggagccagactgtgaccctaacaaagcccatccagggagctccgtgaaa
ggcgactgcggcaacccttctgttgggatcttcttctttgtcagctacatcatcatctca
tttctggtagtggtgaacatgtacattgctgtgattttggagaattttggtgttgccact
gaagaaagcgctgaacccttgagcgaggatgactttgagatgttctacgaagtctgggag
aagtttgatcctgatgcaacacaattcatggaatttgagaaattgtctgattttgcagca
gcacttgagcctcctcttcatctacccaaaccaaacaaagtccagcttattgcaatggat
ctgcccatggtaagcggcgacagaattcactgccttgacatcttgtttgctttcacaaag
cgtgttttgggggaaagtggggagatggacgccctcagaatacagatggaagatcggttt
atggcatccaatccttcaaaagcttcctatgaaccaattacaaccacattaaaacgaaaa
caggaggaggtatctgctgtcattattcaacgggcttacagacgtcaccttttaaaacga
acagtaaaacaagcttccttcatctataacaaaaataaaaccgaaggaggcgctggtctg
ggtctgaaagatgaaatccttattgacaagttaaatgaaaactcatttacagagaaaacc
gatataactgcatcaacagcagtttgtccaccttcttatgatcacgtaacaaggccagtc
aaagaaaaacatgaaaaggaagataaaggtggtcagaaataa
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