Chroicocephalus ridibundus (black-headed gull): 134518110
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Entry
134518110 CDS
T10910
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03030
DNA replication
crid03420
Nucleotide excision repair
crid03430
Mismatch repair
crid03440
Homologous recombination
crid03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
crid03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
134518110 (RPA1)
DNA replication proteins [BR:
crid03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
134518110 (RPA1)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
134518110 (RPA1)
MMR (mismatch excision repair)
134518110 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
134518110 (RPA1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134518110
NCBI-ProteinID:
XP_063196437
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Position
7:complement(55555717..55599392)
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AA seq
613 aa
AA seq
DB search
MSVQLSEGAIAAIMQGECVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSAQCICQVNRFIVNSLKDGRRVVILMDLNVLKTADKVGGNIGNPVPYNEG
QGQQRSSAPAANPAPSKPQQQNGNLSVAGPAAPKYHAPSNQFGKASALSTVKTPGGSQAK
VVPIASLNPYQSKWTICARVTQKGQIRQWSNSRGEGKLFSIELVDESGEIRATAFNDQAD
KFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFV
SISDLENKPKDSIVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGH
EAEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLE
CASISDVRGGPASGMNTNWKTLFEAKSENLGQGDKADYFSCVATVVHLRKENCMYQACPS
QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLEYQWLTCFQETAELILGQN
AAFLGELKEKNEQAFEEVFQNANFNTYEFKIRVKQETYNDESRIKATAVDVKPVNYRDYS
KRLIASIRRNAQL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcagctgagtgagggcgccatcgcggcgataatgcagggggagtgcgtctcc
aagcccgtgctgcaggtcatcaatacacgggctattgctacaggaaatgggccaccgcgt
taccgagtgttgatgagtgatggagttaacacgctctcctcattcatgttggcaacgcag
ctgaactctctggtggaagaggaacgcttatcagcccagtgtatttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggttatactgatggatttaaatgtt
ctgaaaactgctgataaggttggtgggaatattggcaatccagtgccatacaatgaaggg
caagggcagcaacgttcttcagctccagctgcaaatccagcacccagcaaaccgcagcaa
caaaatggcaatttgtcagtagcaggtcctgctgctccgaagtaccatgctccctcaaac
cagttcggtaaagcgagtgctctgagcacggtgaagacaccagggggatcgcaggccaaa
gtagtgccgattgccagcctgaacccataccaatctaagtggaccatttgtgctcgtgtt
acccaaaaaggccagatccgccagtggagcaactcccgtggtgaaggaaagctcttttct
atagagctagttgatgaaagtggtgagattagagcgactgcattcaatgatcaagcagac
aagttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaag
actgctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgag
acttcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgagtttgta
tccatctctgacttggagaacaagcccaaagactcaattgttgatgtaattggaatttgt
aagagctatgaagatgtcactaaaattatagtgaaagctaacaatagggaggtatcgaag
aggaacgtgcatctgatggatacatcagggaaactggtgacagctacgctatggggacac
gaggcagaacaatttgatggttctagacaacctgtgatagccatcaaaggagcccgagtc
tctgatttcggtggtagaagcctgtctgtcctgtcctcaagtacagttgtcatcaaccct
gatagcccagaggcttttaagctccgaggatggtttgactccgagggccagcttctggaa
tgtgcctcaatctccgatgtgaggggtgggccggcgtctgggatgaataccaattggaaa
actttgtttgaagccaaatctgagaacttgggacaaggagataaggcggattattttagc
tgtgtggccacagtagtacatctgcgcaaagagaactgtatgtaccaggcatgtccctct
caggattgcaataagaaagtgatagaccaacaaaatgggctgtatcgttgtgagaagtgt
gatcgtgaattccccaacttcaagtaccgcatgatgcttctggtgaccattgcagacagt
ctagagtatcagtggctgacatgtttccaagagacagcagaactcattcttgggcaaaac
gcagctttcctgggagaactgaaggaaaagaacgagcaggcatttgaagaagtgttccaa
aatgcaaacttcaacacgtacgagttcaagatccgagtaaaacaggagacttacaacgat
gaatcccgtattaaggctacagcagtggacgtcaaacctgtgaactacagagactacagc
aagaggttgatcgcaagcatcaggagaaatgctcagctatag
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