Chroicocephalus ridibundus (black-headed gull): 134518144
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Entry
134518144 CDS
T10910
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134518144 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134518144 (HSPD1)
03110 Chaperones and folding catalysts [BR:
crid03110
]
134518144 (HSPD1)
03029 Mitochondrial biogenesis [BR:
crid03029
]
134518144 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crid04147
]
134518144 (HSPD1)
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
134518144 (HSPD1)
Messenger RNA biogenesis [BR:
crid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
134518144 (HSPD1)
Chaperones and folding catalysts [BR:
crid03110
]
Heat shock proteins
HSP60 / Chaperonin
134518144 (HSPD1)
Mitochondrial biogenesis [BR:
crid03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
134518144 (HSPD1)
Exosome [BR:
crid04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134518144 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
134518144 (HSPD1)
Exosomal proteins of breast cancer cells
134518144 (HSPD1)
Exosomal proteins of colorectal cancer cells
134518144 (HSPD1)
Exosomal proteins of bladder cancer cells
134518144 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
134518144
NCBI-ProteinID:
XP_063196527
LinkDB
All DBs
Position
7:33951594..33961923
Genome browser
AA seq
621 aa
AA seq
DB search
MGRCLAGGAGRRRSVPKAPSRCCVQICPLTARYGLRRRLLLPPTLPADMLRLSTVLRQIR
PVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPK
VTKDGVTVAKAIDLRDKYKNIGARLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKIS
KGANPVEIRRGVMLAVDAIIAELKKLSKPVTTPEEIAQVATISANGDQEIGNIISDAMKK
VGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQDAYVLISEKKIS
SVQSIVPALEIANSHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQ
LKDMAIATGGAVFGEEGLSLNVEDIQPHDFGKVGEVIVTKDDTMLLKGKGEKAQIEKRIQ
EIIEQLEVTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAV
EEGIVPGGGCALLRCIPALDALAPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVE
KILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLSTAEAVVTEIPKE
EKEAAMGGMGGMGGGMGGGMF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctgcctggccgggggggcggggcggaggcggtcagtgcctaaagcgccttcc
cgctgctgcgtgcagatctgcccgctcactgctcggtacggactgcggaggcgcctgctg
cttccccccacactgcctgcagacatgctccgtttgtctacagtactccgtcagataagg
ccagtgtccagagcactcgccccacatctaacacgagcgtatgcaaaagatgtgaagttt
ggagcagatgctagagctcttatgcttcaaggagtagatcttttagcagatgctgtagct
gtcaccatggggccaaagggaagaacagttattattgaacaaagctggggaagtcccaaa
gtgacaaaagacggtgtgacagtagcaaaggcaattgacttaagagacaaatacaaaaat
attggagccaggttagttcaagatgttgccaacaacacaaatgaagaagcaggagatggt
accactactgcaacagtacttgcacgtgctattgccaaggaaggctttgagaagatcagc
aaaggagctaatccagtagaaatcaggaggggggtgatgcttgcagttgatgctatcata
gctgagctgaagaagctgtccaaacctgttacaactccagaagaaattgcacaggttgcc
acaatatcagcaaatggagatcaagaaattggcaacataatctctgatgcaatgaaaaaa
gttggacgaaagggtgtaatcactgtcaaggatggaaaaactctaaacgatgaattggaa
atcattgagggtatgaaatttgacagaggctacatctctccgtattttattaatacaacc
aaagggcagaaatgtgaattccaggacgcttatgtcttaatcagtgaaaagaaaatttct
agtgtacagtccatagttccagcacttgaaattgccaattctcaccgcaaacctttggtc
attattgctgaagatgttgatggagaagcgctcagcactctagttttgaacagactgaaa
gttggccttcaggttgttgctgtaaaagcaccaggttttggtgacaacaggaaaaaccag
cttaaggatatggcaattgctactggtggtgctgtgtttggagaagagggtttgagccta
aatgtggaagatattcagccccatgacttcggtaaagttggagaggtcattgtgacaaaa
gatgacaccatgcttctaaaggggaagggtgaaaaggctcagattgaaaaacgcattcaa
gaaatcattgaacagctagaagttaccacaagtgactatgaaaaagagaaactgaatgag
cgactggccaaactgtctgacggagtagcagtattgaaggtcggtggcacaagtgatgtt
gaagtgaatgagaagaaggacagagttactgacgccctgaacgccacccgtgctgctgta
gaggaaggcatcgttccaggcggtggctgtgcattgcttcgctgcattccagctttagat
gccttagctccagccaatgaagaccagaaaattggcattgaaataataaagagaactctg
aaaatcccagcaatgactattgcaaagaatgcaggtgttgaaggatcgttaatagttgaa
aaaatcctgcagagtccatcagaagttggctatgatgcaatgcttggggactttgtaaat
atggtagaaaaaggaatcatagacccaacgaaggttgtgagaactgctctgatggacgct
gcaggtgttgcctctctcttatcaacagcagaagcagtggtgaccgaaattcctaaagaa
gagaaggaggcagcaatgggagggatgggtgggatgggcggaggaatgggaggtggcatg
ttctaa
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