Chroicocephalus ridibundus (black-headed gull): 134518200
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Entry
134518200 CDS
T10910
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134518200 (VPS53)
Membrane trafficking [BR:
crid04131
]
Protein recycling
Others
EARP complex
134518200 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
134518200 (VPS53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
Laminin_II
GrpE
HAUS1
TPR_CAND1
Syndetin_C
hAT-like_RNase-H
NBD94
COG3_N
MCPsignal
COG5_N
Med11
DUF5654
Dor1
Snf7
Motif
Other DBs
NCBI-GeneID:
134518200
NCBI-ProteinID:
XP_063196673
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Position
7:complement(53572520..53646282)
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AA seq
831 aa
AA seq
DB search
MEEDEPELAAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI
DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRPGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPQEWCMTERIAVEFCHVTRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLADGTVKKPEVPPPSTNPFLEDETGTETDEIVIEKSDTDKPKKPKVPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSEV
AKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGEMDTFSIVISNS
IQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRK
YFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRS
EQSSMLDLFRQRLPAPPSGVENAGSLSLSAPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagccggagctggcggccgggctggaggcggcgctggagctggccccc
gccgtgcaggccgccatcgagcaggtatttcccagccaagatccactggacagagcagat
ttcaacgctgtggagtacattaatactctctttcccactgagcaatctttggcaaacatc
gatgaagttgtgaacaaaatcagattgaaaataaggaggctggatgacaacattcgaact
gtagtgagaggacagaccaacgtgggacaggatggcaggcaggccctggaagaagcccag
aaagccattcaacagctctttggtaaaattaaggatattaaagacaaggctgaaaaatct
gaacaaatggttaaagaaatcacacgggatatcaagcagctagatcatgccaagcgtcat
ctgaccacctccatcaccaccctcaatcacctgcacatgctggcggggggcgtggattcg
ctggaggccatgactaggaggagacaatacggggaagttgccaaccttctccaaggtgtt
gtgaatgtgttagagcacttcaacaaatacatggggattcctcagattcgacagctttct
gaaagggtgaaggcggcgcagaatgagctgggacagcagatcctggccgacttcgaggaa
gcctttccttctcaaggtacaaagaggcctggtgggcccagcaatgtcctacgtgatgca
tgtctagtcgccaatgtcctggatcccaggatcaaacaggaaatcatcaagaaattcatt
aaacaacacctctcggagtatctggtccttttccaggaaaaccaagatgtggcctggctg
gataagattgacaggcgctacgcctggataaagcggcagctggtggactacgaggagaag
tacgggcgcatgtttccccaggagtggtgcatgacggagcgcatcgcggtggagttctgc
catgtcacgaggacagagcttgcgaagataatgcgcacaagagcaaaggagattgaggtg
aaattgcttttgttcgcaattcagaggacaaccaactttgaaggactcctggccaaacgc
ttctcaggttgcactctagctgatgggacagtgaagaagccagaagtgccacctccctcc
accaacccatttctggaggatgaaactgggacagagacagatgagattgtgatcgagaaa
agtgatacggacaaaccaaagaagccgaaggtccctgacaatccttttcatggcattgtt
tccaagtgctttgagcctcacctttacgtgtatatcgagtcccaggacaaaaatctcggc
gaactgattgacaggtttgtggccgacttcaaagctcaaggtccccccaagcccaacgtg
gatgaaggaggagccgtcctgcccagctgtgccgacctctttgtgtactacaagaagtgc
atggtgcagtgctcccagctcagcaccggcgagcccatgatagccctgaccaccatattc
cagaagtacctccgggaatacgcctggaaaattctgtctggaaacctgcccaagacaact
agcagcagtggggggctcaccatcaccagtttgctgaaagaaaaggaaggctctgaggtg
gcgaagtttactttagaagaactctgcctcatttgcagcatccttagcactgcggagtac
tgcttggccaccacccagcagttggaagagaaactcaaagaaaaagtggatgcaagtcta
gtggagagaatcaacctgacgggagagatggacactttcagcattgtgatctccaacagc
atccagctgttagtgcaggacctggacgcagcctgtgaccctgctctgaccgctatgagc
aagatgcagtggcagaacgtggaacacgttggtgaccagagtccttatgtcacctcagtc
attctccacattaaacagaacgtccccatcatccgcgacaacctggcctccacgagaaag
tatttcactcagttctgtattaaatttgcaaactccttcattcccaagttcattaaccat
ctcttcaagtgcaaacctattagcatggtgggcgcagaacagctgctgctggacactcac
tctctgaagatggttctcctggatctgccctccattgggtcccaagtggtgaggaaggct
cctgccagctacacaaagatagtggtgaaaggcatgactcgggctgaaatgatcctgaag
gtggttatggctccacacgagcccccggttgtgtttgtcgacaattacatcaagctcctt
gctgactgcagtacagacactttccagaagatactagacatgaagggcctgaagaggagc
gagcaaagcagcatgctggacctcttccgccagcgcctcccggctcccccctccggagtg
gagaacgccggctccctctcactgagtgctcctacgcccgagcaggagtcctctcggata
cggaaactggagaaactcatcaaaaaaagactctaa
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