Chroicocephalus ridibundus (black-headed gull): 134518273
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Entry
134518273 CDS
T10910
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134518273 (SUPT6H)
03036 Chromosome and associated proteins [BR:
crid03036
]
134518273 (SUPT6H)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
134518273 (SUPT6H)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
134518273 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
134518273
NCBI-ProteinID:
XP_063196899
LinkDB
All DBs
Position
7
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNQEGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEETEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
EEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWATSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPS
YSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtagaaagtgaagcagaggagtcggaggaggagtacaaccaagaaggg
gaggttgtgcccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggaggagaaccttgatgatcaagatgaacaggggaacctgaaaggattcattaatgat
gacgatgatgaggaagaggaagaggaggaagaagccagtgactccggagactctgaggac
gatgttggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgatttt
gacctcattgaagagaacttgggcgttaaagtcaaaagacaaaaattcaggcgtgtgcga
aaaatgtccgatgatgaggatgacgaagaggaagactatgggaaagaagaacatgagaag
gaagctattgctgaagaaatctttcaggatggtgaaggcgaggagggaggggaagctgtt
gaagctcctgttgctccaccagaagaggaagaggaggaggaggaagatgaatctgacatt
gatgacttcattgtggatgacgatggacaacctctgaagaagccaaaatggcgaaagaag
ctccctggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggacttt
gactatgatgagtttgagaagtacaacgagtacgatgaggagatggaggaggaatatgag
tatgaggatgaagaaaccgaaggggagacccgtgtacgacccaaaaagactgccaagaag
cgcgtcagtcggcgtagcatctttgagatgtacgagcccagtgagctggagagcagtcac
ctgacggaccaggacaacgagatccgcatgacagacatgcccgagaggttccagttgcga
tccatcccggtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttac
aggaacgcgtttgcgacacccaccatctccttgcaggaaagttctgattaccttgaccgt
ggacaagccagcagcagcttcagccgcaaggggcccagcactatccagaagataaaagaa
gccctgaatttcatgagaaatcaacattttgaggtcccattcatcgccttctacagaaag
gagtatgtggagccagaactgcacatcaatgacctgtggagggtctggcagtgggatgag
aagtggacccagctgaagatccgcaagcagaacctgacacgtctttttgagaagatgcag
gcctatcagtacgaacaaatctctgctgacccagacaagcccttggcagatggaataagg
gctctggatactactgacatggagaggctgaaggacgtgcagtccatggacgagctgaag
gacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgct
gccaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaggaaggt
gaaggggaggatgcagaagatgatgagcagaaaggacctgagctgaagcaggcttcccgt
cgggatatgtacaccatctgccaaacagctgggctggatggcctggctaagaagtttggt
ctgacacctgagcagtttggagagaatctccgagacagttaccagcgtcacgagacagag
cagttccctgcagagcccctggagctggccaaggattatgtgtgtagtcaattcccaagc
cctgaagctgtgctggaaggagcccgatacatggtggctttgcagatagccagggagcct
ttggtcaggcaggtcctgagacagactttccaagaaagagctaaaatcaacatttcacca
accaaaaaggggaagaaggatattgatgaagcccactatgcctattcctttaaatacttg
aagaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcagag
gaggaggcgctgctcactatagatatcagcattgacatgaaaggagtggagggttatggt
agcgaccagacgtactttgaggaaatcaaacagttctattaccgagatgagttcagccac
caggtgcaggagtggaatcggcagcgtacgatggccattgagcggtctctcaaccagttc
ctctacgtgcagatggctaaagagttgaagaacaagctcttggtggaggccaaggagtat
gtcctcaaggcttgtagccggaagctgtacaactggctaaaagtagcttcataccgtcct
gatcaacaagtggaggaagatgatgatttcatggatgaaaaccaagggaaggggattcgg
gtgctaggcattgcattttcctcagccagggaccaccccgtgttttgcgcccttgttaat
ggagagggtgaggttacagacttcctccgattgccgcatttcacaaagagaaggaacgcc
tggcgtgaggaagagagggaaaagaaggcccaggatattgaaaccttgaaaaaattcctc
ctgaacaagaagcctcacgtggtgacaattgcaggcgagaacagggatgctcagatgctg
atggaggatgtgaagagaattgttcatgagctggatcaagggcagcagctgtcctctatt
ggggtggagctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgag
aatgagttccgggattacccacctctgctgcgtcaagccgtctcccttgcacgccgcatt
caggaccccctcatagagtttgcccaggtctgcagctccgatgaggatattctctgccta
aaactccaccctctgcaggagcacgtggtgaaggaggaactgctgaatgccctctactgc
gaattcataaaccgtgtgaacgaggtgggagtggatgtcaatcgggcgattgctcaccct
cacagccaggctttgttgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctg
ctaaagatcttaaaacaaaacaacacgcgcctggagaacaggacccagctggttacgatg
tgccacatgggacccaaggtgtttatcaactgcgctggcttcatcaaaattgacaccgcg
tcgctgggcgatagtactgattcctacatcgaagtcctggatgggtctagggtccatcct
gaaacctacgaatgggcaagaaaaatggcagtggatgccttagaatatgatgagtcggca
gaggacgctaatcccgcaggagctctagaggagatcttagaaaaccccgagcgtctgaaa
gacctggatctcgatgcctttgctgaagaactggaaagacagggctacggcgacaagcat
atcactttatatgacattcgagctgaattaagctgcaggtacaaggacctgagaaccccg
taccgttctccaaacacagaagaggtcttcaatatgctgaccaaagaaactccagagact
ttttacataggtaaaatgatcatctgcaatgtgactggcatagcccacaggcggccacaa
ggagaaagctacgaccaggcaatacggaatgatgaaactggcctttggcagtgtcctttc
tgtcagcaggataactttccagagctcagcgaggtctggaaccattttgacagcggttcc
tgcccgggtcaggccattggagtgaagacacgtctggataatggcgtcgctggcttcatc
ccaacgaaatttcttagtgataaggtggtcaagcgaccagaagaaagagtgaaggtggga
atgaccgttcactgcaggattatgaagatcgacattgagaagttcagtgcagacctgacc
tgcaggacctcagacctgatggataagaacaatgagtggaagctgcctaaagacacttac
tacgactttgattctgaggcagcagatcacaaacaggaagaagacctgaagaggaagcag
cagcggacaacgtacatcaagagagtaattgctcacccatcattccacaacattagcttc
aagcaagctgagaagatgatggagaccatggaccaaggggatgtgattattcggccaagt
agcaaaggggagaaccacctgactgtcacctggaaggtgaacgatggcatttaccagcat
gtggatgtccgagaagagggcaaggagaatgccttcagccttggctccacactttggatt
aacacagaggagtttgaagacctggatgaaattgttgctcgctatgtccaaccaatggct
tcttttgccagagacctgttgaatcacaaatactaccaggactgcaacggtggagacaag
aagaagctggaagagctgctgataaagaccaagaaagagaagccaacgtttattccctac
tttatcagtgcctgtaaagatctacctggcaaattcctcttgggataccagcctcgaggc
aaaccaaggatagagtatgtgacggtgacaccagaaggattccgctaccggggccaggtc
ttccctactgttaacgggctcttccgatggtttaaggatcattatcaggaccctgttcca
ggtattacccccagcagtagcagtcggaccaggactccagcctccattaatgctactcca
gctaacattaacctggcagacctgacccgtgcagtgaacgctctaccgcagaacatgacc
tcccagatgttcagtgccatcgctgctgtgacaggccagggacagaacccaaatgccacc
cctgcacagtgggcaaccagtcagtatggctatggaggcagcggaggcggcagcagcgcg
taccacgtcttcacgactccagcacagcaaccggtggccacccctctgatgacccccagt
tactcctacactacccccagccagccgattacaacaccccagtaccagctccaggccaac
accacaccccagtccacccagtcccagacgcagtcacagccatcgtccagctccaggcag
aggcagcagccaaagaccaacagtcacgctgcgatcgactgggggaagatggccgagcag
tggctccaggagaaggaggctgaacggaggaaacagaagcaaaggttgactcctcgcccg
tctcctagccccatgatcgagagcacgcccatgtccatcgctggggacgccacgccactg
ctggatgagatggatcgatag
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integrated database retrieval system
