Chroicocephalus ridibundus (black-headed gull): 134518721
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Entry
134518721 CDS
T10910
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
134518721 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crid03400
]
134518721 (XRCC5)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
134518721 (XRCC5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
Motif
Other DBs
NCBI-GeneID:
134518721
NCBI-ProteinID:
XP_063197923
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Position
7:16618719..16672776
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AA seq
730 aa
AA seq
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MARSGKAAIVLCLDVGFPMSNSAFGEESSLEQAKKVMTKFVQRQVFAESKDEVAVVLFGT
GGTRNALASGDQYQNITVHRSLMLPDFDLLEDIQDTIKPGSEQADFLDAIIVCMDLLQKE
TLGKKYEKRHIELFTDLSSPVSEDQLEIIIANLKKTGISIQFFLPFPVDVDDGGGDTSAS
ERSQMHRNAFPKKALTEQQKEGINVVRKLMHTLDEGGGLEEIYTFRESLERLSMFKKIER
RPMAWPCQLTIGSNLSIRIVAYKSVTEEKVKKIWTVVDAKTLRKDDVQKETVYCLNDDDE
TEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFSRSSQIQRHYYMGNQVL
KVFAAKDDENAAVAFSALVHALDELKVVAIVRYAYDRRCNPQVGVAFPYIKDAYECLIYV
QLPYMEDLRQYLFSSLKNNKKCIPTADQLSAVDSLIDSMNLVCEDDDGETFEDLFKPSKI
PNPHFQRLYQCLQHKAFHPNEPLPPIEQHVLEMLEMPRVVKERCQAPLEKVKALFPLKEV
GKKKEEKTAQDIFKDNSEDGPKPKKVKIEDEEGSFSIMKLAEGNVTSVGSVNPGEDFRIL
VRQKNADFKDVSQQLITRIDQFLENKGSQYYMKGINCIRVFREEAIKLSKVQCFNDFLQA
LKSKVEDKALADFWEIVIQDRISLITKDEAGGSLVTSEEAEKFLAPKEKKNETLPPTDEG
GDVDDLLDMM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcagcggcaaggcagccatagtgctgtgcctggatgtaggctttccaatgagc
aattctgcctttggtgaggagtcttcacttgaacaagccaagaaggttatgacaaagttt
gttcagcgacaggtttttgctgagagtaaagatgaagttgctgtagttttgtttggcaca
ggtggtactaggaatgccctcgccagcggggatcaataccaaaacattactgtacatagg
tcactaatgctaccagattttgatctgctggaagacattcaagatacaattaaaccaggc
tcagaacaagcagactttctggatgcaattattgtgtgtatggacctacttcagaaagaa
acactaggaaagaaatatgagaagagacacattgaactgtttacagaccttagtagtcct
gtcagtgaggatcagctggaaattatcattgctaacttgaagaaaacaggaatttcaatt
cagttttttctgccatttccagtggatgttgatgatggaggtggagacacaagtgccagt
gaacgttctcaaatgcacagaaacgcttttccaaaaaaggctttaactgagcaacagaag
gaaggcatcaatgtggtgaggaaactgatgcatactttggacgaaggaggagggctggaa
gaaatttatactttcagagagagcctggagcgtctttcgatgtttaagaaaatagaaaga
agacctatggcttggccctgccagctcactattggttctaatttgtctataaggattgtg
gcctacaaatcagtcacagaagagaaggtgaaaaaaatttggacggttgtggatgctaaa
actctcagaaaagatgatgtgcaaaaagaaactgtttactgcttgaatgatgatgacgag
acagaggttcagaaagatgatactattcaagggtttcgctatgggagtgatatagttcct
ttttccaaggaagatgaagagcaaatgaaatacaaaacagaagcaaaatgtttttctgtt
ttgggattcagcagatcctctcagatccagaggcattactacatgggcaaccaggttctg
aaggtctttgcagctaaagatgatgagaatgcagcagttgctttttctgcccttgttcat
gcactggatgagttgaaagtggtagctatagtgcgttatgcttatgacagaagatgcaat
ccgcaagttggagtagcttttccgtatattaaggatgcatacgagtgtctcatctatgtg
caactaccctacatggaagacttaagacagtacttattttcatccttgaaaaacaataaa
aaatgcattcctacagcggatcagttatctgctgttgactctttgattgattctatgaat
ttggtttgtgaagacgatgatggagaaactttcgaggacctgtttaagcccagtaaaatc
ccaaaccctcactttcagaggttatatcagtgtttgcagcataaggcttttcaccccaat
gagccattaccaccaattgaacagcacgttttagagatgctggagatgccccgtgtggta
aaagaaaggtgtcaggctcctcttgaaaaagtaaaagcgcttttccccctaaaggaagtt
ggcaagaaaaaagaagagaagactgctcaagacatcttcaaagacaacagtgaagatgga
cccaaacctaagaaagtaaaaattgaagatgaggaaggtagctttagcatcatgaaactt
gctgaaggcaatgtcacctctgttggcagtgttaacccaggagaagatttccgaatcctg
gtgaggcagaaaaatgccgacttcaaagacgtgagtcagcagttgataacccgcattgat
cagttcctggaaaataaaggctcacagtactacatgaaagggataaattgtatcagagtt
ttcagagaggaggccattaagctgtccaaggtgcagtgctttaatgactttctgcaggcc
ctgaaatcaaaggtggaagataaagccttagctgatttctgggagatcgttatacaagac
agaatttctttgatcactaaagatgaagcagggggaagtttggtgactagcgaagaggct
gaaaagttcttggctccgaaagaaaagaaaaatgaaactctgcctcccacagatgaaggt
ggtgatgttgatgatttgctggacatgatgtga
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