Chroicocephalus ridibundus (black-headed gull): 134518763
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Entry
134518763 CDS
T10910
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134518763 (TRIM50)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134518763 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
PRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
TRIM_CC
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-Nse
zf-RING_4
U-box
Sina_RING
zf-ANAPC11
CRLF3_N
Rep_trans
DUF677
TRAF3_RING
DUF16
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
134518763
NCBI-ProteinID:
XP_063198006
LinkDB
All DBs
Position
7
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AA seq
495 aa
AA seq
DB search
MARRMSINELEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSGELDGQFLCPVCRQTV
DCSASPPNVTLARVIEALQSWGEAEPTPESCPTHHNPLSLFCEADQEVICGLCGTIGNHR
QHKIVPISTTYCRMKEEQSVLLTDVHQYKKNLDEHFSKLINNKSRIANEADVFKWVIRKE
FQELHRYIDEEKATFLESIEGKAAQLITSIECQVKQTSDALQRLKEMQSSLEALGNENQL
DFIRKYGSSQFRSELSSLHPSDGIFSPVTFKPCFHQDDIKMTVWKRLHRRVLPAPETLKL
DPVTAHPLLELFKGDTVVQCGLYQRRDSNPKRFNSSNCILTCKGFSCGQHYWEVIVGTRN
HWRVGIIKGTVSRKGKLSKSPENGVWLIGLKEGKVYEAFSTPRATLPLTTRPQRIGIYLH
YEKGELTFYNADSPDELRHIYTFQAEFQGQLYPIVDLCWPDRGPYSPPIILPAPATSQHP
WAPYNHPAPEEPMKP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaggatgagcatcaacgagctggaggaccagctcctctgtcccatctgcttg
gaggtcttcaaggagcccctgatgctgcagtgtgggcattcgtactgcaagtcctgcgtg
gtgtcactctccggagagctggacgggcagttcctgtgccccgtgtgccgccaaaccgtg
gactgcagtgcctcaccacccaacgtcacgctggcccgcgtcattgaggcgctgcagagc
tggggtgaggcagagcccaccccagagtcctgcccaacgcaccacaaccccctcagcctc
ttctgcgaggccgaccaagaggtgatctgcgggctgtgcggcaccattggcaaccatcgc
cagcacaagattgtccccatctctaccacgtactgccggatgaaggaggagcagtctgtg
ctgctgaccgatgtccaccagtacaagaagaacctggatgaacacttcagcaagctcatc
aacaacaaaagccgcatcgcaaatgaggcggatgtcttcaagtgggtgatccggaaggag
ttccaggagctgcacaggtacattgacgaggagaaggccaccttcttggagagcatcgag
gggaaggcagcccagctcatcacctccattgagtgccaggtcaagcagacatcggacgcc
ctgcagaggcttaaggagatgcagagctctctggaggcactcggcaacgaaaaccagctt
gatttcatccgtaaatatggctcctcccagttcaggtcagagctctccagcctgcaccca
agcgatggcatcttcagccccgtgaccttcaaaccatgtttccaccaagatgacatcaag
atgactgtgtggaagcgcctgcaccgccgtgtcctgccagctccagagacactgaagctg
gacccggtaacagcacatcccctcctggagctcttcaaaggtgacacggtggtgcagtgc
gggctctaccagcgccgggacagcaaccccaagcgtttcaactcgagcaactgcatcctt
acctgcaagggcttctcctgtggccagcactactgggaggtgattgtgggcaccaggaac
cactggcgcgtgggcatcatcaagggcacggtcagccgcaaagggaagctgagcaagtct
cccgagaacggcgtttggctcatcggcctgaaggaagggaaggtctacgaggccttcagc
accccacgggccaccctgccactgaccacccggccccagcgcatcggcatctacctgcac
tatgagaagggtgagctgaccttctacaatgctgacagccctgacgagctcagacacatc
tacaccttccaggcagagttccagggccagctctaccccattgtggacctgtgctggcca
gacagagggccctactccccccccatcatcctgcccgcgcctgccacaagccagcacccc
tgggcaccatacaaccatcctgccccagaggaacccatgaagccatag
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