KEGG   Chroicocephalus ridibundus (black-headed gull): 134518896
Entry
134518896         CDS       T10910                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:crid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:crid03032]
    134518896 (RIF1)
DNA replication proteins [BR:crid03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    134518896 (RIF1)
SSDB
Motif
Pfam: Rif1_N ESF1
Other DBs
NCBI-GeneID: 134518896
NCBI-ProteinID: XP_063198330
LinkDB
Position
7
AA seq 2335 aa
MSAPAACPGLQPLLETLEDPTAPLGDLTDAHLTIANRLTGEEGKEFTADVRKHFSQLCKV
FKAHISNQNSELSNAALQALGFCVFNSNITSGLSATEIRDLLSMVNSVAVKTSDKNTRTR
ALWVISKQAFPPEIVKKEVSSIISTLETILTKGDVQSMVVEYEALNVIIRLVEQTPAQMG
EEAVRWAKLIIPLVVHSAHKVQLRGATALEMGMPLLLQKQQEVAAVTEHLMTTKLISELQ
KLFSAKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGSPVVKKIAFIAWK
SLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTKLEVWWYLLMRLGPQLPANFE
QVCVPLIQSTLSLDSSAPLQGTPSRVPANQNLALATPTPKSGPYPFASAVTPRMNLNSST
AGVVVLPSIQLLGIEMLLHFLMGPEVVDFAKQNKLALSLEPLQYPLISSPSFFCKHASTL
INAVQDGFIAIGKEVPDCMLNVIWKDMNGYVKMAIESGNKKEKQGSEILTMLLQALKNTV
RSNSLPVQKILSLIDITVKELPSKVLGSPAYQVADMDLLNGTPALFLIQLPFHNNLLECC
VTDERFFVILTTLVGFVLSGPTSPLAFSESVIGILNQSAKQVENKEHLWRMWSIVVNPLT
EWINRTNEVNQGDALEHNFNAVYSALLLPVSHIFPIKEFPQPTMKSLLRTWSDLYRPFAR
CAALVATAEENLCCEELCAKIISGLEGETPVMFSMMDGLTHIISVMVDCINFAPYGTKYQ
PKNRSPQTPTDWSKKKKEPLGKLASLFKLLVMLLNSFHVFSSKEICSETLVSVGPSIIAI
LHNIISHVSLPSVIGTMFAIFSKPLAVFYEKTKLADVPKVYSDLNNKLEKLLSEIIQCLQ
SHCTGSYDSDLLAQLSPLLCVIFQHKSKQIRNQCAHFWNATFAKTTSLTYPEELKSVLSQ
AKKKIPLLLPGFESVEIAEECSGPFSDAMENSQLDARISGMEVKLGQKRDSILAQTNELK
NEVKDKSSNVQVTSAKLKLEFSSSKTKSERLLEEEQSVDFVFIPPETKERILTEHQKEVL
RSKRVDIPAMYNNLDASQDTTLFSQYTQSQEDSLGKSPVIENAKEDTKTKPQEENARSER
RTSKADEIAEDCKPDNPLENAACVEKSPVTHIKESSTSNSEGESQRDVAEAAPEEPSVGE
GLEKSTVEAASKEPSVGNKNTSNVSSSSTSSDIISGTPQPVSRRQSFITLEKFGSSENRP
FSISALNSFSEMSGSASVAGKQENTNVCKTGAKPEKSGEDKKPSKFETEQIVTAIRRLTR
RQSKMEHQGNKQSKLLVRSEQEKSMQESFASSSTENSPELSSTVEDVEHVLLAQSQALHS
TEEEIKKVEDTIAEIEKVRVLDMDSKENTPPETTVSPDQVTGDDSQVPHVSPNQKIPRRS
SRRRSETVESTSGSQDKEDGHQKRDRRKDDEKSGQKKVPQAKDDVSQKQKAVSGKTTENT
NKKESKLLERTAAEDVSSKESPASRGLDEEVNRSGRRSEDNSKTDTEGQDCSSSTVDQRK
MERPRYHTRRASQGLLSSIENSEADGSETKEESTRKKRLAKAKSRSDSLEGKLKDPQPGG
RSHEASSQRNETKNALETNEGELSPEVGTDAELTSEVCEPKQQEMPADPVKAVASASSRD
SSDAQNADVEQKSSTSMEPVPNPCVSDPDLKAPEENKPVKKQTNSEDSCPTVLPQQVPGG
NASGGDLSSLQIPECQHKRSKRVKRLRNCDCCSTKPKQRVMSVTEPKNENTLELNEPQAT
PVQTPDNTSEVSGNSSLDESLSMAPCAMSTPLHPPKEPRAFDLEGERTSEDDLQGSSVVA
QEGVENPERTAGEITDSVVETREPADRSDPTEQCLSERGAEEPGDSSVLAGNCSEEPSAT
EKEEISQSGQLEEIPGALIVAIKPEKNQVDEPESNRGDEEAAESTVGETCIIQGIEMKEE
LVKTEITVPESAALDKEDAVKNNGVDSPQKPEDHNSLALVNESPNGMQARCTWSPSASPS
TSILKRGVKRNQDDDSLSPANKIRRVSFANPIYQEGLADDIDRRSPVVRSHSSSPSSRSL
KILSNIQAKHITTPTKGFLSPGSRNPKFKSSKKCLITEMAKESLPCPTECVYPALVGCKA
PVDVILPQITSNMCSARGLGQLIRAKNIRTVGDLSTLTASEIKTLPIRSPKVSNVKKALK
GYHEQQVKSRGFEEMSALEDAEKPVNNVEDKSLPVDEEKLATDLLEPVVLNADEQPAADL
LSQIDALAAQLASEDLHGYSGSQLFEMQEKLIGMTNCIMKNLQSRWKSPPHDSSD
NT seq 7008 nt   +upstreamnt  +downstreamnt
atgagcgctcccgccgcctgccccggcttgcagccgctgctggagaccctggaggatccg
accgccccgctgggggacctcactgacgcgcatctcactatcgccaatcgcttgacgggt
gaggaaggcaaagaattcactgcagatgtcagaaaacacttttctcaactttgcaaagtg
tttaaggcacacatttctaatcaaaactcagagctaagtaatgcagcattacaggcgtta
ggattctgcgtttttaattcaaacattacatctggattatctgcaactgaaatacgagac
ttgctttcaatggtgaacagtgttgctgtaaaaacttcagacaaaaacactcgcactcgg
gcactttgggtgatctctaagcaggcgtttcctcctgaaattgttaaaaaggaggtgtcc
agtataatttctaccctggaaacaatacttactaaaggagatgtacaatctatggtggtt
gaatacgaagcactaaatgttattatacgcttggtggagcaaactccagcccagatggga
gaggaggctgtgaggtgggcaaaactgatcattcctttggtcgtccattcagctcacaag
gtgcagttacgaggtgccactgctctggagatgggcatgccactgctgctccagaaacag
caggaggtagcggctgtcactgagcacctaatgaccacaaaattaatttcagaacttcag
aaattgttttctgcaaaaaatgagacttacgtactaaaattatggccgctgtttgtcaaa
ttacttggaaagactctgcatcgtagtggcagttttatcaactcattgctgcaactggag
gaacttggatttcgtagtggctcaccagtggtaaagaaaatagccttcattgcgtggaag
agtctaatagataattttgctctaaatccagatatattgtgcagtgctaaaaggctgaaa
ctgctaatgcagccgctgagctcgatccatgtgagaacagaggctttggcactgacaaaa
ctggaggtctggtggtatttgctcatgaggctaggacctcagctgcctgcaaactttgaa
caggtttgtgtaccgttaatccaaagtactttaagtttagattcttctgctccattgcaa
ggaactccctcgcgtgtaccagctaaccaaaatttagccttggcaacccctacaccgaaa
tcaggtccttacccgtttgcaagtgcggtcacaccaaggatgaacttgaattctagtaca
gcaggagtggtggtgttaccttccattcagcttttgggaattgaaatgctgcttcacttc
ttgatgggaccagaagttgtagattttgctaagcaaaacaaacttgcacttagtttagag
cctctccagtacccactgatcagtagcccttcttttttttgtaagcatgccagcacactt
ataaatgcagttcaggatggctttattgcaattggaaaagaagttcctgattgtatgctg
aatgttatatggaaggacatgaatggatatgtaaaaatggctattgaatcaggaaataag
aaagaaaagcaagggtcagaaatactgactatgttgctccaggccttaaaaaacactgtt
agatcaaattctcttcctgtgcagaaaatactgtctctcattgatattactgttaaggaa
ttgccttcaaaagtattgggatcaccagcttatcaggttgctgatatggatcttttaaat
ggaacaccagctctgttcttaattcagctgcctttccataataacctcttggaatgctgt
gtaacagatgagagattctttgtaattctaacaacgctcgtgggttttgttttgtctggg
cctacgtctccgctggctttcagtgaatctgtgatcggcattcttaatcagagcgcaaag
caagtggaaaacaaagagcatctttggagaatgtggagtattgttgttaatccgctgacc
gaatggattaatcggactaacgaagtaaatcagggtgatgcactggaacacaacttcaat
gctgtttatagtgcattgttgctaccagtatcgcatatcttccccattaaggaatttcca
cagccaactatgaaatccttgttgcgcacttggtcagacctgtatagaccatttgctcgc
tgtgctgctttagttgcaacagcagaagaaaacctatgctgtgaagaactttgtgccaaa
ataatatctgggctagaaggtgaaactccagtaatgttttcaatgatggatggtctcacc
catattatatcagttatggttgactgcatcaactttgcaccatatggtactaaatatcag
ccaaaaaatagatctccacagacacctacagattggtctaagaagaaaaaggaacccctt
ggaaagcttgcctctctatttaaactcctggtgatgttactaaactctttccatgtgttc
agttccaaagaaatctgttcagaaacattggtctctgttggtccttcaattattgctatt
cttcacaacatcatcagccacgtttcattgccttcagtgattgggactatgtttgcaatt
ttttcaaaacccctggcagtgttttatgaaaaaacaaagcttgctgatgtacctaaagta
tacagtgatcttaacaacaagcttgaaaaactcctgtccgagatcatccagtgtttacag
tctcactgcactggctcgtacgacagcgatctgctagcgcagctttctccgttgctctgt
gtaatatttcagcacaagagcaaacagatacgcaaccagtgtgcccacttctggaacgcg
acattcgctaagacgacgtcattgacgtaccctgaagagttaaaatctgtgttaagccaa
gccaaaaagaaaatcccactcttgctgcctggttttgaaagcgtggagatagccgaagaa
tgcagtggcccgttctctgatgcgatggaaaactcacagctggatgcaaggataagtgga
atggaggtaaagttgggtcaaaaacgagactctatattggcacagacgaatgaactaaaa
aatgaagtaaaagacaagtccagtaatgtgcaagtaacatctgcaaagttgaaactagaa
ttttcatcttcgaagactaaaagtgagagacttctggaagaggagcaatctgttgacttt
gtgtttattcctccagaaacaaaagaaagaatactaacagaacatcaaaaagaagtgctt
aggtcaaagagagttgatattcctgcaatgtacaacaatttggacgcatcgcaagatact
accttattttctcagtatactcaaagccaggaagattctttgggaaaatcacctgtaata
gaaaatgcaaaagaagatactaaaaccaagcctcaggaagaaaatgcaaggagtgaaaga
cgcaccagcaaagcggatgaaatcgcagaggactgcaaaccagataatccactggagaat
gctgcctgcgtggaaaagtcacccgttactcacatcaaggagagctcaacttccaacagt
gagggagagtcacaaagggatgtggctgaagcagctccggaggagccatcggttggagag
ggattagaaaaaagtactgtggaagcagcttcaaaggagccctcagtagggaacaaaaac
acttcaaatgtcagcagcagttcaacgtcaagtgacatcatttccggaacaccgcagccc
gtgagccgacggcagtcttttattactttggagaaatttggtagttcagagaacagaccc
tttagcatttcggcattaaacagtttctccgagatgtctggaagtgcttctgtggcaggg
aaacaggaaaacacaaacgtatgcaagactggtgctaaaccagagaaatctggagaagat
aaaaagccttcaaaatttgagactgaacaaatagttactgcaatacgaaggctgactcgc
aggcagagtaaaatggagcaccaaggaaataagcagtccaagctgttggttaggtcagaa
caagagaaaagcatgcaagagtcttttgcttccagcagtacggaaaacagtcctgaactc
tcttctacagtggaagacgtggaacatgttctccttgctcagtcccaggctctccattcg
acagaagaagaaattaaaaaagttgaagatacaatagcggaaatagaaaaggtccgggtg
ttagatatggattctaaagaaaatacacccccagagacgaccgtgtcacctgaccaggta
acaggggacgatagtcaggttccacatgtgtctcctaatcagaagataccaagacgttct
tcaagacgacggtcagaaaccgtagaaagtacatcaggcagtcaagataaggaagatggc
caccaaaagagagacagacgtaaagacgatgaaaaatctgggcaaaagaaggtgccgcag
gcaaaagatgacgtatcccaaaagcagaaagcagtttctgggaaaactacagaaaataca
aataaaaaagaaagcaagctactggagagaactgctgcagaggacgtaagctcaaaggag
tctcctgcttcaaggggccttgacgaggaagtgaacagaagtggtaggaggtcagaagat
aactcgaagactgacacagaaggtcaggactgtagctcgagcacagtagatcagaggaag
atggaacgcccgcgataccacaccagacgagcttcacaagggttgctttccagcatagaa
aactcagaggctgatggctccgagaccaaggaagaaagcacgaggaagaaaagattggca
aaagcgaagagcagaagtgattctcttgaaggtaaattgaaagatccacagccaggaggc
cgcagccatgaggcgtcttcccagagaaacgaaaccaagaatgcgttggaaacaaatgaa
ggtgaactaagccctgaagtcggcacagatgctgagttgacctctgaagtgtgtgagcca
aagcagcaagaaatgcctgcagatcctgtcaaagctgtggcatctgccagctccagggat
tcgtctgatgcacagaatgcagatgtggaacaaaagagcagtacatcgatggaaccggtc
cccaacccctgtgtatctgatccggatttgaaagcaccagaggaaaataaacctgttaag
aagcaaacaaattcagaagacagttgtccaactgttctgcctcaacaagtaccaggagga
aatgcttcaggtggtgatctctcctctttgcaaatacctgagtgtcagcacaaaagaagc
aaaagggtaaaaagactaaggaactgtgattgctgtagtacaaagccaaagcagcgagta
atgtcagtcactgaaccgaaaaatgagaacactcttgagctgaacgagccccaggccacc
ccagttcagacgcctgacaatacatcggaggtgtctggtaattccagtttggacgagagc
ttgtccatggcaccttgtgccatgagcactccattgcaccctcctaaggaacccagggcc
tttgacttggaaggagagagaacatctgaagatgatctgcaaggaagtagtgttgtagcg
caggagggtgtagagaacccagagcgtacagcaggtgaaattaccgactccgtggtggaa
acgagagaacctgctgatcggagtgacccaactgagcagtgtctgtctgagcgtggtgca
gaagagcctggtgacagctctgtgctggcagggaattgcagcgaagaaccatcggctaca
gaaaaggaagaaataagtcagagtggacaactggaggagatacctggggcactgattgtt
gctatcaaacctgagaagaatcaggtggatgagccagaaagcaatcggggtgatgaagaa
gcagctgagagtactgtaggagaaacctgcattatccaaggtatagagatgaaggaggaa
ttggtgaaaactgaaatcacagtgcctgaaagtgcagctttagacaaagaagatgctgta
aaaaataacggtgtggattcacctcaaaagccggaagaccacaattctttggcattagtt
aatgaaagccccaacgggatgcaggctcgctgcacgtggtctccctcagcttctccatcc
actagtattttaaagagaggcgttaaaagaaatcaagatgatgattccctgtcacctgct
aataagattcgccgagtctcttttgcaaacccaatttatcaagaaggactggccgatgac
atcgacaggaggagtcctgtcgttaggtcccattcttcttcaccatcttcccgaagcctt
aaaattttatctaatattcaggctaagcatattaccactccaaccaaaggatttctgtcc
ccaggatctcgtaaccctaaatttaagagctcaaagaagtgtttaattacagaaatggcg
aaggaatcgctgccttgccctacggaatgcgtgtatcccgccttggttggctgcaaagca
ccggttgacgtcattctacctcagatcacatcgaacatgtgcagcgccagaggcctgggg
cagctcattcgggcaaagaacatcaggacggtgggtgacctgagtactctgacagcatcc
gagatcaaaaccctgcccatccgctctccgaaagtctccaatgttaaaaaagccctgaaa
ggatatcatgagcaacaggtaaaatctcgaggatttgaggaaatgtcagcgcttgaggat
gcagaaaaacctgtaaataacgtagaggataaatctcttcctgtagatgaagaaaaactt
gcaacagatctgctggaaccagttgtcctgaacgcggacgagcagccggcagcagatctg
ctgagccagattgacgcgcttgcggctcagctcgcctccgaagatcttcacggctattcg
ggaagccagctctttgagatgcaagaaaaactcattgggatgacgaactgtatcatgaaa
aacctgcagtcccgctggaaatcgccaccccatgacagttccgattag

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