Chroicocephalus ridibundus (black-headed gull): 134519133
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Entry
134519133 CDS
T10910
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04010
MAPK signaling pathway
crid04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134519133 (CACNA1H)
04020 Calcium signaling pathway
134519133 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crid04040
]
134519133 (CACNA1H)
Ion channels [BR:
crid04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
134519133 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
134519133
NCBI-ProteinID:
XP_063198793
LinkDB
All DBs
Position
8:51980339..52105928
Genome browser
AA seq
2386 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDKNFAMTYNLTFLHPYYRTDEAEE
NPFICSSHRENGMQKCSNIPNRKEYKVECTLSMDSYTPSLYNPDFSSRNACINWNQYYNV
CMAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICH
IFRKVKRRTIRLYNNWQSKRRKKVNPNSTTNGQSHRGKKRITSIHHLIHHHHHHHHHHYH
ISNGSPRGPRSNPEICDLELKVMKPGGQLMLPSPSPNLQSPAPPPDSESVHSIYHADCHV
EGPQVNCKSSNAPASIKLTAGLSNHGNMNYPTILPSPTSKASSIPVPKGKKNGNSPVAVA
NSPVNLGADSYGKLQQLVGEHGLRRTPSRLSGLSAACPLPSPPGGTLTCELQDCPFCASL
LEDPEFAFSESDSCDSDSNGVYEFTQDLQHGDHRDQLQQQRGRRRKKKKKPKERNKVTRL
WKAFGSKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFAL
EMLLKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFM
PALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFD
SLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGF
QAEGDANRSDTDEDKTSANFDDDFEKLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIM
RTAATPMPTPKCSPHMDSVHTFVDSRRGSNASLDPLSYDQKSLSSLRSSPCANWGTSSNW
GSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRAES
LDCRSSLDLPELLQLPTMRHSLSVSPMAVLPAEYQDCNGKMVHVPSEFFLRVDGHKEDAM
DYEDDMEDSYCYRIRKVLEPYKPQWCKSHEDWSLYLFSPQNRFRMMCQKVIAHKMFDHVV
LVFIFLNCITIALERPDIDPHSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYL
QSSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVV
ETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKTDCTNARYKW
VRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLL
IVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPA
RKYIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVL
KLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVL
KLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLS
RHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLI
AQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGATTSATSGSRGGAVAPESR
APYRSQETMKSESAVQVKHQALEALSCESVSLAIPDSDTLEGAEAPMMEIPSFCSVSHHV
LTPSHKTPGHEAEGGTASLRPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKAPFPL
HEVEMETYPCKSQRGSITSIRSQPVGTCSSLRVPTESLQLAVRSPNHEGRHRWKILPPHV
TPRSPTLNKLLCRQEAIQTESVDGQTPDRKDSLQAEPGETLPSAKQPQSTFTPSPLHSMA
ASLPGTPPCSPPSSPHRHPSTLTRKHTCGQHGVPSRPPSPGGSPPNPEGSLFESSDLADE
EVRHINSSAKDWGGEHSDAGSRSTSPFISPAPSPVPLKNCSTTSLSRSSSKEKDLKKFYS
IDTKGFLNKPSWADDQRRHSIEICPSISDGDCSFEDPAEEKQRSPAHIQMESEYIHGARR
KKKMSPPCISIDPPMEDDGGAASRTKPSENSMLRRRTPSCEFPAYRESLELAENQPGEPA
SKAERRGQPPCRGEHLTIPNFSFEQLDGSSLSSLSDLLDSGQSMPGSVDSRPDPAASELK
KPDHLKTQWSNAEKSKELLGIAKSPLQKQDLVPVTVATEEDIDDPV
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatcctcctgaactgcgtcaccctgggcatgttccagccctgtgaggacgtg
gaatgccagtcggagcggtgcaccatcctggaggcatttgacgacttcattttcgctttc
tttgcggtggagatggtcatcaagatggtggctctggggatctttgggcagaagtgttac
cttggagatacgtggaatcgcctggacttcttcatcgtgatggcgggcatgatggagtat
tctctggacggacacaacgtgagcttgtctgcgatccgcaccgtccgggtacttcggccg
ctacgagccattaacagggtcccaagtatgcgaatactcgtcaccctgctgttagatact
ctgcctatgttaggcaacgtcctcctcttgtgcttctttgtcttcttcatctttgggatt
gtcggtgtgcagctctgggcagggctgctgagaaacaggtgtttcctagacaagaatttt
gcaatgacatacaaccttactttcctgcatccgtactaccggacagacgaagcagaggag
aatccattcatctgctcatcgcatcgtgaaaacggcatgcagaaatgctccaacatccca
aacaggaaggagtacaaggtggagtgcaccttgagcatggactcctacaccccaagttta
tacaaccctgacttcagcagcaggaacgcctgcataaactggaaccagtattacaacgta
tgcatggcaggggacgtaaacccacacaatggagctatcaattttgataatatcggatat
gcctggatagctatttttcaggttataaccctggaaggatgggttgacatcatgtattat
gtgatggatgcacattctttttacaattttatatattttatattgcttataatagttggt
tccttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaaacaaag
cagcgggagaaccagctgatgcaggagcagcgggcccgttatctctccaacgacagcaca
attgccagcttctcggagccaggtagctgctacgaggagctgctcaagtacatctgccac
atcttcaggaaggtgaaacggcggacaatacgtctgtacaataactggcagagtaagcgc
cggaaaaaagttaacccaaacagcaccacaaatgggcaaagccaccgaggcaaaaagcgc
atcacctccatacaccacctcatccaccatcaccatcaccaccaccatcaccactatcac
atcagcaatgggagccctcgggggccacggtccaaccctgagatctgcgacctggaactc
aaggtcatgaaacctggaggtcaattgatgcttccttctccatcgcccaacttgcagagc
cctgctcctcctccagattcggagtctgtgcacagcatttaccatgcagactgtcatgtt
gaaggaccacaagtgaactgtaagtcttccaatgcccctgcaagcattaagctgactgcc
ggactctccaaccatggcaacatgaattatcctaccatcctgccttctccaactagcaaa
gccagttctattccggttcccaaaggaaagaagaatggcaattcacctgtggccgtggct
aatagccctgtaaatctgggcgcggattcttatgggaagctgcagcaactggtaggagag
catggtctgcggcggacgcccagccggctgtcggggctgagcgcagcctgcccgctgccc
agcccgccgggcggcaccctgacctgcgagctgcaggactgtcccttctgtgccagcctc
ctggaggaccccgagtttgccttcagcgagtccgacagctgcgactccgacagcaatggc
gtctacgagttcacccaggacctgcagcacggcgaccacagagaccagctccagcagcag
cggggcaggaggaggaagaagaagaagaaacccaaggagaggaacaaggtcacccgcctg
tggaaggctttcggcagcaagctgaagaggatcgtggagagcaagtatttcaaccggggg
attatgatagccattctcatcaacacgctgagcatgggcatcgagtaccacgagcagcca
gatgagttgaccaacgccttggagatcagtaatatcgtcttcacaagcatgtttgccctg
gagatgctcctgaaactccttgcctttggcctcttcggctacatcaagaacccgtacaac
atctttgatgggatcatagttgtcatcagtgtctgggagatcatcggccagtcggacggc
ggcctctctgtgctacgaacttttcggctgctccgggtgctgaaactggtgcgtttcatg
cccgccctccgtcgccagctggtggtcctgatgaagacaatggacaacgtagccaccttc
tgcatgttgctcatgcttttcatctttatcttcagcattctcggcatgcatctttttgga
tgcaagttcagcctgaaaaccgatacgggagacacagttccagatagaaagaattttgat
tccttactttgggccattgtgaccgtatttcagatactgactcaagaagactggaatgtg
gtcctgtacaatgggatggcatctacatcctcatgggcagcactctactttgtggccctg
atgaccttcggcaattatgtgctcttcaatcttcttgttgccattctggtagaaggcttc
caggctgagggtgatgccaataggtcagacacagatgaggacaaaacatctgccaacttc
gatgatgattttgagaagcttaaagacctccgagcaacagagatgaagatgtactcactt
gccgtcaccccaaatggacacctggagggcaggggaagcatgccacctcctataatcatg
cgcactgctgccacaccaatgcccactccaaagtgttccccgcacatggattcagtgcac
acttttgtggactcaaggagagggagtaacgcttcgctagaccccttgagctacgatcag
aagtccttgtccagcctccgcagctccccttgtgccaactggggcaccagcagcaactgg
ggaagccgacgctcaagctggaatagcttgggcagagccccgagcctcaagaagaaaaac
cagtcaggagaaagagagtccttgctctccggggaggggaaaggcagcacagacgatgac
tctgacgacgccaagtccagcacggtcagccggccctcgttgcaccgccgggcagagtcc
ctggactgccgcagctccctggacctgcctgagctgctccagttgcccaccatgcgccac
tcgctcagtgtcagccccatggcagttctgcctgctgaataccaagactgcaacggcaag
atggttcacgtccccagcgagttcttcttgcgtgtcgacggccacaaagaggatgccatg
gactatgaggatgacatggaggatagttactgctaccgaattcgtaaagtcctggagccc
tacaaaccacagtggtgcaagagtcatgaagactggtccctctacttgttttccccacag
aatcggttccgaatgatgtgccagaaggtcattgcccacaaaatgtttgatcatgtggtg
ctggtcttcatatttctcaactgcatcactatagcactggagcgaccagacatagaccca
cacagcacagaaaggatattcctaagtgtttctaattacatcttcactgcaatcttcgtg
gctgaaatgatggttaaggtggtagctcttggctttttctctggggagaacacctatctg
cagagcagctggaatgtcctggatggagtcctggtctttgtatctatcattgacattatt
gtctccatggcatcggcaggcggagctaagatcctgggtgtccttcgcgttttgaggctt
ctgcggaccttgagacctctccgagtcatcagcagagccccaggtctgaagctggtggta
gaaaccttgatctcctccttgaggcctattgggaatattgttctcatctgctgtgctttc
ttcattatctttgggattttaggggtccagctttttaaaggcaagttctactactgtgat
ggtcctgatgtaaaaaacatcactacgaagactgactgcactaacgcacgctacaaatgg
gttcgccggaagtacaattttgacaatttgggacaggccctcatgtccttgtttgtcctc
tcctccaaagatggctgggtgaacatcatgtatgatggtttggatgccgtgggtattgac
caacagcccatccagaaccataacccttggatgcttctctacttcatctccttcctgctc
atcgtcagcttctttgtgctcaacatgtttgtgggagtggtggtggagaactttcacaag
tgccgacaacaccaggaggcggaggaggcccggcgtcgggaggagaagcggctgagacgc
ttggagaaaaagcgcaggaaagcccaacgtaggccttactatgctgactattcaccagca
cggaagtacattcacaccctctgcaccagccactatctcgacctcttcatcacattcatc
attggggtcaatgtcatcactatgtcgatggagcactacaaccagccaaagtccctggat
gaagctctgaagtactgcaactatgtgttcaccatagtttttgtgttcgaggcagttctg
aagttggtggcatttggttttcgaaggttctttaaggacaggtggaatcagctggatttg
gccatagttctcttatcaattgtgggaatcacgctggaggaaattgagatgaacgctgcg
ctgcccatcaaccccacaataatacgcatcatgcgggtgctgagaatagcaagagtgctg
aaactgcttaaaatggccaccgggatgcgagctctcctggacacagtggtacaagcactt
ccccaggtagggaaccttggcctactttttatgctcctgttttttatctatgctgccctg
ggagtggaattgtttggcaagctagactgcagtgaagaaaatccttgtgaaggtctgagc
cggcacgcaactttcaccaacttcggcatggcctttctcaccctcttcagggtgtcaaca
ggagacaactggaatggtatcatgaaggacactctccgggaatgcactcgggaagacaag
cactgcctcagttacctgcctgttatctctcctgtctacttcgtcacctttgtcctcatc
gcacagttcgtcctagtcaatgtagtggtggcagtgctgatgaagcatctggaggagagc
aacaaggaggccaaggaggatgctgagatggatgctgagatcgagttggagatgtccaga
ggagcaaccacctcggccaccagcgggagcaggggaggcgcggtggccccggagagcaga
gcaccctacagaagtcaggagaccatgaagtccgagtcagcggtgcaggtgaaacaccaa
gccctggaggcgctgagctgtgagagtgtgtctttagccatcccagactcagacacgctg
gagggggcagaggctcccatgatggaaatcccgtccttctgctctgtatcccaccatgtc
ctgacaccttcccacaaaaccccaggccacgaggctgagggcggcacagcctctctgagg
ccacaggactctcaaaacctgctgacggtccgcaagatctccgtttcccgtatgcactcc
ttgcccaacgacagctacatgttccggccagtgatgccagcgaaagcccctttccccctc
cacgaggtggagatggaaacgtatccctgcaaatcccaaagagggtccatcacttccatc
cgctcccagcccgtgggaacgtgttcctctctgagagtcccaacggagtccctccagctg
gcagtccgttctcccaaccatgaaggccgccaccgctggaagatccttccccctcatgtc
acacctcgatctcctactctcaacaagctgctgtgcagacaggaggccattcaaacagag
tctgtggacggtcagactccggaccgcaaggacagcctgcaagcagagcctggagagacg
ctaccgtcagcaaagcagccccagagcaccttcacccccagcccgctccattccatggcc
gcctccctcccgggcactcccccgtgctcccccccgtcctccccgcatcggcaccccagc
acactcacacggaagcacacttgcggccagcacggcgtccccagccggccgcccagccct
ggcggcagccctcccaaccctgagggcagcctcttcgagtcctccgacctggctgacgag
gaggtccgtcacatcaacagctcggccaaagactggggaggggagcactcggacgctggg
agccgctcgacttcgccgttcatctccccggccccgtctccggtgcccctcaagaactgc
agcacaaccagcctctccaggagcagcagcaaggagaaggacttgaagaagttttacagc
atcgatacgaagggcttcctcaacaagcccagctgggcagacgaccaaaggcgacactcc
attgagatctgcccctccatcagcgatggggactgtagctttgaggaccctgctgaggaa
aagcagcggtcccctgcccacatccagatggagtccgagtacatccatggagcccggagg
aagaagaagatgagcccgccctgcatttctatagatcctcccatggaggacgacggcggg
gcggcctcgcgcaccaaaccctccgagaacagcatgctgcggcgaaggaccccatcctgc
gagttcccggcttacagagagtccctggagctcgcggagaaccagcccggggagccggcc
tccaaagcggagcgccggggccagcccccgtgccgcggggagcacctgaccatccccaac
ttctcctttgagcagttggacggcagctccttgagcagcctctcggatctcctggacagc
ggtcagtccatgccgggctccgtggactcccggccggaccccgccgcctccgaactgaaa
aagccggatcacttaaaaactcaatggagcaacgcggagaaaagcaaagagctcctgggc
attgctaagagccccctccagaagcaggacttggtcccagtgactgttgcaacagaagaa
gacatcgatgacccagtatag
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