Chroicocephalus ridibundus (black-headed gull): 134519238
Help
Entry
134519238 CDS
T10910
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04115
p53 signaling pathway
crid04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134519238 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
134519238 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134519238 (COP1)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134519238 (COP1)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134519238 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134519238 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
134519238
NCBI-ProteinID:
XP_063199188
LinkDB
All DBs
Position
8:35081590..35218844
Genome browser
AA seq
710 aa
AA seq
DB search
MSGSRPPPHSAAPPAATPAASSSSSSSSSAAMAPGSSSSSGAAARPVLVAAAVSGSGLAR
LAAAARPGGGGGGSSGGGGGSGAGGGGGSRKRPLLTPLCNGLINSYEDKSNDFVCPICFD
MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSE
EKRLKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL
QILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPS
HSSIIDSTEYSQPPGFSSSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSD
DSRTTSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV
TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF
TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV
KFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQ
LKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFD
TVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagccgcccgccaccgcactccgctgcgccgcccgccgccaccccggccgcc
tcctcctcctcttcctcctcctcttcggcggccatggcgccgggctcgtcctcctcaagc
ggcgcggcagcgaggcctgtgctggtggcggccgccgtgtcaggctcggggctggcccgg
ctggcggcggcggcgcggcccggcggtggcggcggcggctcctccgggggaggtggcggt
agcggcgcgggcggcggcggcggcagcaggaagaggccgctgctcaccccgctctgcaac
gggctcatcaactcctacgaggacaagagcaacgacttcgtctgccccatctgttttgat
atgattgaagaagcttacatgacaaaatgtggacacagcttctgctataaatgtattcac
cagagcttggaggacaataacagatgtcccaaatgcaactatgttgtggacaacatagat
catctttatcccaacttcttagtcaatgaacttattcttaaacagaagcaaagatctgag
gagaaaagactcaaactggaccattcagtgagtagcaccaatggccataggtggcagata
attcaagatttactggggactgatcaagacaatcttgacttggccaatgtcaacctgatg
ctggagctgctggtgcaaaagaagaagcagttggaagcagagtcccatgctgcccaattg
cagatccttatggaatttctcaaagttgccaggagaaacaaacgagagcaattggagcag
atccagaaggagctaagtgttctggaagaagatatcaaacgagtagaggaaatgagtggc
ttgtattccccagtcagtgaggacagtacggtgccgcagtttgaggctccttcaccttca
cacagtagtattattgattccacggagtatagccagcctccaggattcagcagcagttct
cagaccaaaaagcagccgtggtataacagcacgctagcctcacgacgcaagcggctcaca
gctcattttgaggacctagagcagtgctatttttccaccaggatgacacgtgtctcggat
gacagcagaaccacaagccagctggatgagtttcaggagtgtctatccaagttcacgcgc
tacaattctgtccgacccctggcaacactgtcttacgctagtgacctctacaatggctcc
agcatagtatccagtattgagttcgaccgagactgtgactactttgccattgctggggtg
acaaagaagattaaagtctatgagtatggtacagtcattcaggatgcagtggatattcac
taccctgagaatgaaatgacctgtaattccaaaatcagctgtatcagctggagtagttac
cacaagaacctgctagccagcagtgactatgaaggcacagtcatcctgtgggatggattc
acaggacaaagatccaaagtctaccaggagcatgagaaaaggtgctggagtgttgacttt
aacttgatggacccaaaactattggcttcaggctcagatgatgccaaagttaagctgtgg
tctaccaacttggacaactcagtagcaagcatcgaggctaaggctaatgtgtgttgtgtc
aaattcagcccctcttctaggtatcacctagcttttggctgtgcagatcactgtgttcac
tactatgatcttcgcaacactaagcagccaatcatggtgttcaaagggcatcgcaaggca
gtctcctatgcaaaatttgtgagcggggaagaaatcgtctctgcgtcaacagacagtcag
ctgaagctgtggaacgtagggaagcctcactgcttacgctccttcaagggtcacatcaac
gagaagaattttgttgggctcgcatccaatggagactacattgcttgtggaagtgaaaat
aattccctttacctatactataagggcctctcaaagacactgctgacgttcaagtttgat
acagttaaaagtgtcctggacaaggaccggaaagaagatgacacaaatgagtttgtgagt
gctgtatgctggagggcactaccagatggggagtccaacgtgctgattgctgctaacagt
cagggtacaattaaggtactggagctggtatga
DBGET
integrated database retrieval system
