Chroicocephalus ridibundus (black-headed gull): 134519292
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Entry
134519292 CDS
T10910
Symbol
SDK1
Name
(RefSeq) protein sidekick-1 isoform X1
KO
K16353
protein sidekick
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134519292 (SDK1)
Cell adhesion molecules [BR:
crid04515
]
Immunoglobulin superfamily
Other
134519292 (SDK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Fn3_VIN3
V-set
Ig_RIMBP2
C2-set_2
Tissue_fac
Ig_5
Motif
Other DBs
NCBI-GeneID:
134519292
NCBI-ProteinID:
XP_063199320
LinkDB
All DBs
Position
8:complement(53856805..54268353)
Genome browser
AA seq
2275 aa
AA seq
DB search
MCFTFLTGCFGAINTSTRNIDLSGDYHTGRHTECSFRVACKVSTNQRVRRFWEVGASGPP
KLRGKGSGRCSQPTEESPASGCGMSNDQSAVRSGRQSDRMGISEAITVGRKVDREIIARR
NSRRGGMMIKLNFCFIFCRGWWAFLLLQLHMLQVLAQDDVAPYFKTEPGLPQTHLEGNRL
VLTCLAEGSWPLEFKWLRNDSEITAYSSEYKYIIPALQRSDAGFYQCVVRNRMGALLQRR
SEIQVAYMGNFMDTNQRKTVTQGQAAVLNFLHILSYPRPQVTWFRDGHKIIPSSRIAITL
ENQLVILATSLTDAGGYYVQAVNEKNGENKTSPFIHLSVASATDPSDTVAPVIVIPPQNT
SVVAGSGEITLECVANARPLERLSMTWKRNGVKITSGISSFGRRLTITNPTSADVGMYFC
EAKLRDSTEEPARAKAFLSIMEPPYFTAEPESVILAEVEKDVDILCQAMGVPIPTLVWYK
DSVPLSKLENPRYKVLLSGGLQIRGLRPEDAGIFQCFASNKAGEIQTYTYLDVTNIKPAF
IQPPEDTTVTEGMTAVLTCAVSGAPKPAISWKKGNRILASGSVQIPRFILLESGGLQITP
VFLQDAGNYTCCAVNSEGALNAFVMLTVWNRTFIVHPPEDSTVIKGTTATLRCEATHDPR
ISIRYVWKKDSVVINPSSSSRITVEKDGTLLISQTWSGDIGDYTCEVISFGGNDSRMARL
EVIELPHSPQNLLATLNSSYSRSVMLSWVRPFDGNSPVLYYMVELSENNSPWKVHLSNLD
PKMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVASGRTN
QSIMVQWQPPPESEHNGVLHGYILRYRLAGLPGEYQYKNITSAEINYCLVKDLIIWTQYE
IQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPPQQFINGIN
QGYKLLAWPVDAPETVTVVTIAPDFHGVHSGCITNLKKYTTYYTSVLCFTTPGDGPRSTP
QLLRTLEDKPGAVGHLSFTEILDTSLKVSWQEPVEKNGIITGYQISWEVYGRNESRLART
LPNTTLEYKITGLSSLTTYTIEVAAVTAKGSGWVTSSTISSGVPPELPGAPSNLVISNIS
PRSATLQFRPGYDGKTSISKWIVEGQVGVLGEEEEWVSLREVENEPDAQMLEVPNLTPYT
HYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPGSVTVRTASETSLWLRWVPLPDTQY
NGNPESVGYRIKFWRVDVQSPTLVKVINDRLEREYTIEDLEEWTEYELQIQAFNAIGAGP
WSEVVRGRTRESVPSAPPENVSAEAVSSTQILLTWTAVPEPEQNGLILGYKILFKAKDFD
SEPKSQIVRGNHTQSFLLSGLRKYVLYEIQVLAFTRIGDGVPSSPPVIERTKDDAPGPPV
RLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNKFTTVEVGSTVRQFTATDL
APESAYIFRTSAKTRQGWGEPLEATVITTEKRERPAPPRQLMTPQSDVSSRSLLLKWVPG
SDGSSPIRYFTVQVRELPNGDWQTYSSSISHEATSCIIESLNPFTSYKLRVKATNDIGDS
DFSAETEAVTTLQDVPGEPPSSVLVTPYTTSSVLVQWQPPKAESLNGLLLGYRIYYRELD
YDAGAGTESKTIQNPSALRAELTPQSSFKTVNSSSALTTYELTQLKKYKRYEVLMTAYNV
IGESPTSTPVEVFVGEAAPALAPQNIQVNSLSASQLELTWDPPPADSQNGNIQGYKIYYW
ESDVQNDTEKVKVLFLPETTVRLKNLTSHTRYMVCISAFNAAGDGPRSSPSQGRTHQAAP
SAPSFLAFSEITCTTLNVSWGEPTAANGVLQGYRVVYEPLAPVQGVSKVVTVDIKGNWQR
WLKVRDLTKGMTYLFRVQARTIAYGPELQANVTAGPAEGSPGSPQEILVTKSASGLTLQW
TEGDSGEKPTTGYIIEARPSDEGLWDMFVKDIPRSATSYTVGLDKLKQGVSYEFRVVAVN
EFGYGEPSVPSVAVSAQTEAPFYEEWWFLLVMALSSLILILLVVFALVLHGQSKKYKNCS
TGKTISNVEESVTLDNGGFAALELNSRHLNIKSTFSKKNGTRSPPRPSPGGLHYSDEDIC
NKYNGAVLTEGLGLNEKPLEVSESEATDSDYEDELPKHSFVNHYMSDPTYYNSWKRQQKG
VKHPASYRYEECAASETEPYFQTVITTQSSGGVYTPTGQPAPGSRTPVTGFSSFV
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcacatttctgactggttgttttggtgcaatcaatacctccacaagaaacatt
gacttaagtggcgattatcataccgggaggcacacggagtgctcctttcgggttgcatgc
aaagtgagcacaaatcaaagagtccgccgtttctgggaagtgggggcttcaggtcccccc
aaactccggggcaaaggcagcgggcgatgttcccagcccaccgaagagagcccggcctcg
gggtgcggaatgagcaatgaccaaagcgctgtcaggagtggcaggcagtcggatcggatg
gggatcagtgaggcaataaccgttggaagaaaggtggatcgcgaaattattgcccgaagg
aatagcaggcgaggcggaatgatgataaagttgaacttctgtttcatcttctgtcgggga
tggtgggcgtttctgttgcttcagctccacatgttgcaagtactggcacaagatgatgtt
gcaccatacttcaagactgaaccaggcttgccccagacacacttggaaggaaaccggctc
gtccttacttgccttgccgaaggcagctggcccttggaatttaagtggttacggaatgac
agtgaaataaccgcctactccagtgaatataagtacatcatcccagctctgcagaggtct
gatgctggcttttatcaatgtgtcgtgcggaacaggatgggagcattgctgcaaagaaga
tctgaaattcaagtagcatacatgggaaatttcatggacacaaaccagagaaaaacagtg
actcaaggacaagctgcagttctgaacttcctccacatactcagctacccaagaccacaa
gtgacatggtttagagacgggcacaagattataccaagcagcagaatagccatcacactg
gagaatcagctggtcatccttgcaacatcgctgaccgacgcaggaggctactatgtccag
gcagtcaatgaaaagaacggggagaacaagacaagtccatttattcatctcagcgtagca
agtgccacagacccgtccgacaccgtggctcccgtcatcgtcatccccccccagaacacc
agcgtcgtagcggggagcggcgagatcacgctggagtgtgtggccaacgcaagacctctg
gagcggctaagcatgacctggaagagaaatggagtaaaaataaccagtggcatcagcagt
tttgggagacggctcacgatcaccaacccaacctccgctgatgtggggatgtatttctgc
gaagcgaaactgagagacagcacggaggagccggcaagagcgaaagccttcctttctata
atggaaccgccatattttacggctgagcccgagagcgtgattttggctgaagtggagaaa
gacgtggacatcctgtgccaggcgatgggtgttcccattcccaccctggtctggtacaag
gactctgttcccctcagcaagctggaaaaccctcgctacaaagtactgctgagcggtggg
ctgcagatccgtgggctgcgtcccgaggacgctggaatcttccagtgttttgcaagtaat
aaagccggggagatacagacgtacacctacctggatgtgacgaacattaaaccagcattt
atccagcctccagaggacaccaccgtcacggaggggatgaccgcggtgctaacctgtgca
gtgtcaggggctccaaaacccgccatctcatggaagaaaggaaaccggatcttagccagt
ggctcggttcagattcctcgattcattcttctcgaatctggagggctccagataacaccc
gttttccttcaggatgccggcaattatacttgctgtgcagtcaactctgaaggagctctg
aacgcttttgtgatgctgacagtgtggaatcgcaccttcattgtccaccctcctgaggac
agcactgtgatcaaaggaaccacagccactctgcgatgtgaagcaactcatgaccctaga
atttcaatcaggtatgtttggaagaaggacagcgttgtgataaatccatccagcagttcc
aggatcaccgtagagaaagacgggaccctcctcatcagccagacatggtcaggtgacatt
ggcgactacacctgcgaggtcatttcctttggaggaaacgactccagaatggctcgacta
gaagtgatcgagctgcctcattcccctcagaaccttctggccactctgaattcctcgtac
agccgcagcgtgatgctctcctgggtgcgtccctttgatggaaacagccctgttctctac
tacatggtcgagctctctgagaacaattctccctggaaggttcacctatcaaatcttgac
ccaaagatgaccggtgtcactgtgagcggactaactccagcccgcacctaccagttcagg
gtgtgtgccgttaaccaggtgggaaaaggccagtacagctctgagaccagcaggttgatg
ctacctgaggagccccccagtgccccaccgaaaaacatagtggccagcgggcgcaccaat
cagtcgatcatggtccagtggcaacctcctcccgagagtgaacacaatggagttcttcat
gggtacatcctaaggtatcgcctggccggcctccccggagaataccagtataagaacatc
accagtgcggaaattaactactgcttagtgaaagacctgatcatttggacccagtatgaa
atccaggtggcatcttacaatggagctgggctgggagcgttcagcaggcctgtgacagag
tacacgttacagggagtgccgacagctccaccccagaacgtgcaggtcgaagccgtgaac
tccacaaccatccagttcctctggaaccctccaccccaacagttcatcaatggtattaac
caaggatacaagcttctagcctggccagtggatgctccagagactgtgactgtggtcacc
attgctccagactttcatggggttcacagcggctgcatcaccaacctgaagaaatacacc
acgtactacacctcggttctctgcttcaccacacctggcgatggaccacgaagcacgccc
cagctcctgcgcaccctcgaagacaagccaggagcggtgggacacctgagtttcactgag
attctggacacgtctctcaaggtcagctggcaagaacctgtagagaaaaatggcatcatt
acagggtaccagatctcctgggaggtgtatggcaggaacgaatcgcgtcttgcccgcacg
ctacccaacacgacgctggagtacaagatcacggggctgtcgtcactcaccacctacaca
atcgaggtggcagctgtgaccgccaaagggagcggatgggtcacgtcctccaccatctct
tctggtgtgcccccagaacttcctggtgctccatccaacctggtgatctccaacatcagc
cctcgctccgccacgctgcagttccggccggggtacgacggcaaaacgtccatctccaag
tggatagtcgaaggccaggttggtgtactgggtgaagaagaagagtgggtgagtcttcgt
gaggtggagaatgaacctgatgctcagatgctggaggtaccgaaccttactccttacact
cactacaggttccggatgcggcaggtgaacgtggtgggcgccagcccgctcagccagccc
tcccgtgtcatccagacgctgcaggcccccccggacgtcgcccccggcagcgtcaccgtg
cgcacggccagcgagaccagcctgtggctgcgatgggtgcccctccccgacacgcagtat
aatggcaatccagagtcggtggggtacaggatcaagttctggcgtgtagacgtgcagtct
cccaccctggtgaaggttattaatgaccgactggaaagagagtacaccattgaagatctg
gaggagtggacggagtacgagctgcagatccaggctttcaatgccatcggggcaggaccg
tggagcgaagtagtgcgaggtcgcacacgggagtcggttccctcggctcctcctgagaac
gtctctgctgaagctgtgagttcaacccagatcctcctgacgtggaccgcggtccctgag
cccgagcagaacggtctcatcctgggttacaagatacttttcaaagcaaaagattttgac
tcggaacccaagagccaaatagtacgaggtaaccacactcagtctttcctgctctctggc
ttgcggaaatacgtgctctatgagatccaggtgttggcattcactcgtatcggagatggg
gtccccagctctcctccggtcattgaaagaaccaaggatgatgcccccgggccgcccgtg
aggctggtgttccccgaggtgaggctgacgtccgtacggattgtttggcagccgccggag
gagcccaatggaattattctggggtaccagattgcctaccgtctggccagcagcagcccg
aacaagttcacgacggtggaggttggctcaacagtcaggcagtttaccgctacagatctc
gcccctgagtcagcgtacatctttcggacatctgccaagaccaggcagggctggggggag
cctctggaagccactgtgatcacaacagaaaaaagagaacgaccagcacctcccaggcag
ctgatgaccccccagagtgacgtgtcatcacggagtctgctgttgaagtgggtccctgga
agcgacggatcttcaccaatccggtattttaccgtccaagtgcgagaactgccaaatgga
gactggcaaacctactcctcttccatcagccacgaggcaacatcctgcattatcgaaagc
ttgaacccattcacctcctacaaactgcgggtgaaagcaaccaacgacatcggagacagt
gacttcagcgcggagaccgaagcggtgacaaccctgcaggatgttccaggtgaaccaccc
agttcggtgttagtaactccctacacgacttcatctgtccttgtgcagtggcagccaccc
aaagctgagagtctaaatggcttgctgctgggataccggatctactatcgggagctggat
tacgacgctggagctggaacagaatccaaaaccatccagaacccctcagctttaagggca
gagctcacaccccaaagcagcttcaagacagtgaacagcagctctgcattaacgacgtat
gaattaacacagttgaagaaatacaagagatatgaagtgctgatgacggcatataatgta
attggtgagagccctaccagcacaccagtggaagtctttgtgggcgaagcagcaccagcg
ctggccccgcagaacatccaagtaaactccctctctgcgagccagctggagctcacctgg
gaccccccgcctgccgacagccaaaacgggaacatccaaggctacaagatttattactgg
gagagcgacgtccaaaacgacacggagaaagtgaaggtccttttcctcccggagacaacc
gtccggctcaaaaacctgaccagccacacgcggtacatggtctgcatctccgctttcaac
gcggccggggacggccccaggagcagcccctcgcagggcaggacgcaccaggcggcaccc
agtgctcccagcttcttggcgttctctgaaatcacttgcactacgctcaatgtgtcttgg
ggagagccgacagcagcaaatggagtcctgcagggttatcgagtagtctatgagcctttg
gctcccgtccagggggtgagtaaggtggtgactgtggatattaaagggaactggcaacgc
tggctgaaagtccgagatctcaccaagggcatgacctatttattcagagtgcaagcccga
accatcgcctatggacctgaactgcaagccaacgtcacagctgggccagcagaaggttct
cccggctcccctcaggaaattctggtgacaaaatctgcttctgggctgacgctgcaatgg
accgagggagattcaggagaaaaacccacaactgggtatatcatagaggcgcggccctca
gatgaaggactgtgggatatgtttgtgaaggacatccctcgcagcgctacctcctacacg
gtcggcctggacaaactcaaacagggtgtgagctacgagtttcgggtggtggctgtcaat
gagtttggctatggagaaccaagtgttccctctgtggcagtatcagcacaaacagaagcc
cctttctacgaggagtggtggtttctgctggtgatggctctctcaagcctgatcctcatc
ctcctggtggtgtttgcattggtcctgcatggccagagcaagaagtacaagaactgcagc
acaggtaaaaccatctccaatgtggaagagtcggtcaccctggataacggaggcttcgct
gctctggagctcaacagcagacacctgaacatcaagagcaccttctcaaagaagaatgga
accaggtctcctcctcgcccaagcccaggggggctgcactactctgacgaggatatctgc
aacaagtacaacggagccgtgctgaccgagggcttgggcctgaacgagaagcccttggaa
gtgtcggagtcggaggccactgactcggattacgaagacgagctgccaaagcactccttt
gtgaaccattacatgagcgaccccacgtactacaactcatggaagcggcagcagaaaggg
gtgaagcacccggcgtcctacagatacgaggagtgcgccgccagcgagacagaaccctat
ttccagactgtcatcacgacacagagctcaggaggggtttacaccccaacgggacagccc
gcgcccggctcccggactccagtgacagggttctcctccttcgtctga
DBGET
integrated database retrieval system
