Chroicocephalus ridibundus (black-headed gull): 134519375
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Entry
134519375 CDS
T10910
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04120
Ubiquitin mediated proteolysis
crid04137
Mitophagy - animal
crid04144
Endocytosis
crid04340
Hedgehog signaling pathway
crid04350
TGF-beta signaling pathway
crid04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134519375 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134519375 (SMURF1)
04350 TGF-beta signaling pathway
134519375 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134519375 (SMURF1)
04137 Mitophagy - animal
134519375 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
134519375 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134519375 (SMURF1)
04121 Ubiquitin system [BR:
crid04121
]
134519375 (SMURF1)
03029 Mitochondrial biogenesis [BR:
crid03029
]
134519375 (SMURF1)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134519375 (SMURF1)
Membrane trafficking [BR:
crid04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134519375 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
134519375 (SMURF1)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
HECT type E3
134519375 (SMURF1)
Mitochondrial biogenesis [BR:
crid03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134519375 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
134519375
NCBI-ProteinID:
XP_063199529
LinkDB
All DBs
Position
8:53300895..53346887
Genome browser
AA seq
742 aa
AA seq
DB search
MIAGKLMWFFMVLSFLYLIFCFAVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVK
NTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQR
LDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGFPVFRTVYEDSGPGR
PLSCFMEEPAPYTDTTGAAGGGNCRFVESPSQDQRLQAQRLRTPEVRGHVQTPQNRPHGH
QSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRST
VSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYE
RDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGE
EGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRI
MGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTF
CVEHNAFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELI
PQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRA
RLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYE
SYEKLYEKLLTAVEETCGFAVE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgattgccggaaagttgatgtggttttttatggttttaagttttctttatctgatattt
tgttttgcagtattatgtgccaagaatcttgcaaagaaagatttcttcagacttcctgac
ccatttgcaaaaatagttgttgatggatcaggtcagtgccattcaactgacactgtgaag
aacacattggaccccaaatggaaccagcattacgatctatatgttgggaagacagattcc
ataaccatcagtgtatggaaccataaaaaaatccacaagaaacagggagctggcttcctg
gggtgcgtccgactcctctccaatgccatcagcaggctaaaagatactggataccagcgt
ttggatctatgcaaactaaatcccacagataccgatgctgtacgaggccaaatagtggtc
agtttacagacacgggacagaataggtacaggaggttctgtagtagactgtagagggctt
ttggagaatgaaggtttccccgttttcagaacggtttatgaagactccggaccgggaagg
ccgctgagctgttttatggaagaaccggcaccgtacacagacactacgggggctgctggc
ggaggcaactgtcgcttcgtagagtcccccagtcaggatcagaggcttcaggcacagcga
cttcggactcctgaagtcagaggtcatgtacagacacctcagaacagaccgcacggtcac
cagtcgcctgacctaccagaaggctacgaacaaagaacaacggtacagggacaggtttat
tttttgcacacacagactggagttagcacatggcatgaccctaggataccaagagacctt
aacagcgtgaattgtgatgaactaggacctttgcctccaggttgggaagttagaagtaca
gtttcgggaagaatatattttgtagatcataacaacagaaccacacaattcacagatcca
cgactacatcacatcatgaaccatcaatgccagctaaaagagcccagccagcagcccctg
ccagctccaaatgaggggtcactcgaagacggggaggagttgcctgcacaaagatatgaa
agagacttggtacaaaagttgaaagttcttagacatgagctctctcttcagcaaccccag
gccggtcactgtcgcattgaggtatccagagaggaaatatttgaggaatcctaccgtcag
ataatgaagatgaggccaaaggacttgaaaaagaggcttatggtgaaattccgaggagag
gaaggcctggattatggaggagtagcaagagaatggttgtatttattgtgccatgaaatg
ttgaatccctattatggactcttccagtactccacagataatatttacatgctgcaaatc
aatccagactcttctatcaatcctgaccatttgtcttatttccattttgttggtcggata
atgggtttggctgtgttccatggacactatatcaacgggggtttcacggttcccttttac
aaacagcttctggggaagcccattcagctctccgatctggaatctgttgacccagaatta
cacaaaagtttagtctggatcttagagaacgatatcaccccagttctggaccatacattt
tgtgtggaacacaatgcttttgggcggattttacagcacgaactcaaaccaaatggcagg
aatattccagtgacagaagagaacaagaaagaatatgtcaggttgtatgtaaactggcgg
tttatgagaggaatagaggcacagttcctggctctgcagaaaggttttaatgaacttatt
cctcagcatctccttaagccttttgaccagaaggaacttgagctaatcataggaggcctg
gataagatagacctgaacgactggaagtcaaacacgcgtctaaagcactgcatggcagac
agcaatattgtgaagtggttctggcaagcggtggaaacatttgatgaagaaagaagggca
aggctgctgcagttcgtgacgggttcgacgcgtgtcccgcttcaaggtttcaaggcttta
caaggttctacaggcgctgcaggacccagactgtttaccatccatttaatagatgcaaac
acagacaaccttccaaaagcccacacttgctttaaccggattgacattccgccttatgag
tcatacgagaagctttatgagaagctgttgacagctgtggaagagacatgtgggtttgct
gtggagtga
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