KEGG   Chroicocephalus ridibundus (black-headed gull): 134519401
Entry
134519401         CDS       T10910                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:crid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:crid03036]
    134519401 (KDM4A)
Enzymes [BR:crid01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     134519401 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     134519401 (KDM4A)
Chromosome and associated proteins [BR:crid03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    134519401 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind 53-BP1_Tudor Tudor_5
Other DBs
NCBI-GeneID: 134519401
NCBI-ProteinID: XP_063199587
LinkDB
Position
8:complement(12481477..12509039)
AA seq 1058 aa
MASELESLNPSARIMTFRPTMEQFRDFSRYIAYVESQGAHRAGLAKIVPPKEWKPRRCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHTLPTPEAAEFLKGDLMQ
KVKNGKQCAEEMETGETCKEEVDEDETKSIPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSAQYEADMAESRERPTSELVQQGEQKLKLPDRVDSAKFEELKTVKLEEEEEEEQEAAA
LDLSISHASNSTSVLTTSKQGSTSSAQPSSPAYSGSDSESADLLAKRTLPGPARVLTVHS
YAKGDASGSDNEQTSGKKASATASMNEQELAEVAKEYIRSMKESKKSKGRRQPLSKLPRH
HPLLVKDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQSP
YCAVCMLFQTYQAECGGNSQNSGVTPAAVDGKIRTKPLIPEMCFTTTGCSTDVNLSTPYL
EEDGTSVLITCKNCHVCVHASCYGVSPDKATEDWMCSRCTENALEEDCCLCSLRGGALQR
ANDDKWVHVMCAVGVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQC
SHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPSQAERAKAALQDLSPGQIVI
SKHKNGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVR
WTDGQVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSVASDMRF
TEIFAEKEVRQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3177 nt   +upstreamnt  +downstreamnt
atggcctcggagctggagagcctcaatcccagcgcgcggatcatgaccttccgccccacc
atggagcagttccgggacttcagccggtacatcgcctacgtggagtcgcagggcgcccac
cgcgccgggctggccaagatagtccccccgaaggagtggaagccgcgtcggtgctacgat
gacatcgacgagctcgtcatcccagcgcccatccagcaggtggtgacggggcagtccggc
ctcttcacgcagtacaacatccagaagaaggccatgacggtccgggagttcaggcgcatc
gccaacagcgacaagtactgcacaccgcgctacacggacttcgaagaccttgaacgaaaa
tactggaagaaccttacgttcaatgcccctatttacggtgctgatgtgaacggcacactt
tatgacaagcatgtagatgcgtggaatattggcagattgaacacgatcctggatattgtg
gagaatgaaagcggcataaccattgaaggagtgaatactccttacctatattttggcatg
tggaaaacttcctttgcttggcatacagaggacatggatctctacagtattaattacttg
cattttggagaacccaagtcatggtactcgatccctccggagcatgggaagcgactggag
agacttgcaaaaggtttctttccgggaagcgcccaaagctgtgaagcatttctccgtcac
aaaatgaccctcatctctccatcaattctgaagaaatacggcatcccatttgataaggtg
acacaggaggctggagagttcatgataacctttccttatagctatcatgctggctttaat
catggcttcaattgtgctgaatctaccaactttgctactcttcggtggatcgagtatggg
aagcagtctgtgctgtgctcctgtcggaaggacatggtgaagatctccatggatgtgttt
gtgaggaaataccagccagatcgttacaagctttggaaagccgggaaggacgtgactgtc
attgaccatactcttccaaccccagaggcggcagagtttcttaaaggggatctcatgcaa
aaagtcaagaatgggaaacagtgtgctgaggaaatggaaacgggagagacatgtaaagag
gaagtggacgaggatgagacgaaaagcatccctaagcatcgcataggaacaaaaaggcac
agggtctgcctggaagtgccacaggaggtgagtgagagtgaggccttccccaaggaggag
ctgagctccgcgcagtatgaagcagacatggcagagtctcgtgagagacctacgagtgaa
cttgtgcagcaaggtgaacaaaagctcaagcttccagatcgcgtagactcagccaaattt
gaagaactgaaaacagtgaagcttgaggaggaagaagaggaagagcaggaagcagctgca
ttggatctctccatttcacatgcttcaaattccacttcagttttgacaacttcgaagcag
ggctcaacttccagtgcgcagcccagctcgcctgcgtattctggttctgactctgaatcg
gctgatctgttggcaaaacgaactcttcctgggccagccagggtacttacagtccatagc
tacgctaaaggggatgccagcggatctgacaatgaacagacttcaggaaagaaagccagc
gccaccgccagtatgaatgaacaagaactggcagaggtagcgaaggagtacataagatca
atgaaggagagtaagaagtccaagggtcgtcgccagcctttgagcaagctcccacgtcat
cacccgctcttggttaaagactgtattagtgatgatgaagcatcggagcaactaactcct
gaagaagaagctgaggagacagaagcgtgggccaagccacttagccagctgtggcagaat
cggccaccaaattttgaggctgaaaaagaatacaatcggaccatggctcagcagtctcct
tactgtgctgtttgtatgctcttccagacgtatcaggcagagtgcggaggcaacagtcaa
aactctggcgtaactccagctgctgtggatgggaagatccgaaccaaacccctgattcct
gaaatgtgctttactacaactggctgcagcactgacgtcaatctttcaaccccctaccta
gaggaagatggaaccagcgtactcatcacctgcaagaactgccacgtctgtgttcatgca
agttgttacggtgtatcccctgacaaggccactgaagactggatgtgctcaaggtgtaca
gaaaatgccttagaagaggactgctgtttgtgttcattacgaggaggagcactgcagaga
gccaatgatgacaagtgggttcatgtgatgtgtgctgtaggtgtactggaggcaaaattt
gtgaacattgcagagcggagtcctgtagatgttggcaaaatccccctgcaacgtttcagg
ctgaaatgcatcttctgcaagaaacgaaggaagagaattgcaggttgctgtgtacagtgc
tcacatggtcgatgtcccacatcctttcatgtcagctgtgcccaagcagcaggagtcatg
atgcagcctgatgactggccatttgtggtctttattacctgcttcaggcataagattcca
tctcaggcagagcgagctaaggctgcactccaggatctgtcacctggacagatagtcatc
agcaagcacaagaatggtcgcttctatcaatgtgaagtggtcagccttgcaaaggagact
ttctacgaggtcaacttcgatgatggttccttcagtgataacctgtatccagaggacatt
gtgagtcgagactgtcttcagttaggtccccctgctgaaggggaagttgtgcaggtgaga
tggacagatggacaagtttacggagccaagtttgtcgcatcacatgccatccagatgtac
caggtggaatttgaagatgggtcacagctgatggtgaaaagggatgatgtgtatactctt
gaagaggagcttcctaagagagtgaagtcaaggctgtcagtagcttcggatatgcgcttc
acggagatcttcgcagagaaggaggtcagacaagagaggaagagacagagagtgatcaat
tcacgctaccgtgaagattacattgaacctgcgttgtaccgggccatcatggagtaa

DBGET integrated database retrieval system