Chroicocephalus ridibundus (black-headed gull): 134519532
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Entry
134519532 CDS
T10910
Symbol
BCOR
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134519532 (BCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134519532 (BCOR)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
134519532 (BCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
134519532
NCBI-ProteinID:
XP_063199944
LinkDB
All DBs
Position
1:complement(96017464..96100787)
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AA seq
1768 aa
AA seq
DB search
MLSATPLYGNVHSWMSNERVRMCGINEDRKIPVNDGDAPKSRLELREENHLNHSVVDATT
AHRIDSLTALSMDRSGLMREGLRVPSSIVYSSLCGLGSEKSRDATSSIAGLGFTPERNPE
IQFKSNPPEAVENAAVSGKAPNGFSAIYKTPPGIQKNSVPTGETLGLDRAAGDKQSPLGV
NGASYLRLPWVNPYMEGATPTIYPFLDSPNKYSLNMYKALLPQQSTYSLPQHLAYSPVCT
NGERFLYLPPSHYVAPHIPSSLASPMRLSTASASPAIPPLVHCPDKSLSWKMGVSPGTGP
VDAHAYPHIQSSKQPRVPAAKPAPANIPPDPALLLPHSPRPSPRLPLPAQVGDAYADFHK
HFPRITTSPSSAVTLPKPYVNVGGEFPPSRLSNGKLPKGSDAGDAPPPAAPHARKAGHER
KDGRSPPLLEKQTPTKDVTDKPLDLSAKVVDAETASKSDHGKKMTPTVLVHGRAGGGTHL
PGSDIVQKETISPGNGCPIYRPEIISTAPSSWIVPGPSPGEESGKSVQLKNKALDWVIPQ
QRSSSCPRMGGTEAVVGSVSGTVSAGGRPASASPAPNANVDCAKTSRSSAESTASVIQHV
GQPVATPAKHSNKVAKSCGQEANFKASETALASSPIFLPHNETFRSPPLPYPRSYLPYPV
PEGIAISPLSLHGKGHVYPHPVLLPNGSLYPGHLAPKPGLPYSLPAGRGEFMTYQDALGM
GMVHPMLLQHSALEITKEEKAERRSRSHERVRYEDPALRGRLPELLESGGKVHFDVPGDK
SLKLHQSSSHGKNSAKSDKHLFPDLLRDEQEAKSEANVTKANFATESSNQANDPTKHKVE
QASQHRDFIVMREEFGRSNDLHETYNFKQAQSSSVFGLRKEDLPVSQPKERVAVQPSPAF
LEGAHESDAPALAFGKVQEEAKPFCMGTAPPGIDANQSYTKDGADDAESADGKILKPKPS
KLAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCERAM
MRFSELEMKEREGQTATKDSEVCRFSQADWENLKGNSEKKPKSVALEDAIADQNDNDRCN
FTSTENNQGHFLETPEEKDLSNEQCYLERHSIYEKAEDQPTEDIGQHPCPRLDRKRKHSG
ERVQNDGSQNENFVDELQDELISKAKKKKNSKDDWPEREMTNNSSNHLEEPNCNEVTNLK
VCIELTGLHPKKQRHLQHLRELWEQQVSPERSPSGKLGRQSRKDLAEAVQPEATAKVKDF
TEERHTKKRSEAKSNRSWSEESLKTSDNEQGLPVFPVSPHMKSLSSSNANSKRQAQPSCT
PASRLAAKQQKIKESRKTDGLYTDEEEDFQHASLLQKYSECEKPSGKRQCKTKHLALQER
RRRSSLTGDDTTDIENAEDKVTVTRKVRKRPEPTSDGDSSPAKPYEQKPYDRLQQTPTSL
PVSQPPQLPVASPPQETTPSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENK
VCDVNHRDNAGYCALHEACARGWLSIVRHLLEYGADVNCSAQDGTRPIHDAVENDHLEIV
RLLLSYGADPTLATYSGRTIVKMTHSELMETFLTEYLTDLQGRSVDDPGLYWDFYGSSVC
DPKDESGFDILANPPGPGDEDEDGFSDVFEFEFSDEPPLPCYNIQVCLSQGPRNWLLLSD
VVKRLKMSSRIFRCNFPNLEVVTITEAEFYKQTSLSQLFSCATDLEAFNPESKELLDLVE
FTSELKTLLGSSLHWLHPHEDPPFDILW
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaactcccctgtatggcaatgttcatagctggatgagcaatgaaagggtc
cgcatgtgtggaattaatgaagacaggaaaattcccgttaacgatggcgatgcgccgaaa
agcagactggagttgagagaagaaaatcacctgaatcacagtgtggtggatgcgactaca
gcacatcgcattgacagtctcacagctctgagtatggacaggtctggactcatgcgagaa
ggactcagagtccccagtagtattgtctattccagcttgtgcggactcggctcagaaaaa
tcacgggatgctacgagttcgatagccgggctgggatttactcctgaaagaaatccagag
atacagtttaagtctaatccccccgaagcggtagaaaacgcagctgtctctggaaaagcc
ccgaatggcttcagcgctatatacaaaacgccacctggaatacaaaaaaactctgtcccg
acgggagagacgctgggtttggaccgagctgcgggtgacaagcagagtcccctcggtgtc
aatggtgctagttacctaaggctcccctgggtaaacccctatatggagggcgcgacgccc
accatataccctttccttgactcaccaaataagtattcgttgaacatgtacaaggcattg
ctacctcagcagtccacttacagcttaccgcagcacctggcttactcgcccgtgtgtacg
aacggcgaacgttttttatacctgcctccctcccactacgttgccccccacatcccctcg
tcgctggcgtcgcccatgaggctctcgacggcttcggcatcgccggccatcccgcctttg
gtgcactgtccggataagagcttgtcgtggaagatgggtgtcagccctggcactggcccc
gtggacgcgcatgcctacccccacatccagagcagcaagcagccccgggtccctgccgcc
aagccggctcctgccaacatcccgcctgaccctgcgctcctgctgccccactcgccccgg
ccatccccccgcctccccctgcccgcccaggttggggatgcctacgccgacttccacaaa
cacttccccaggatcaccacctctccctcctccgctgtcaccctccccaagccctacgtc
aacgtcggcggtgaattcccaccctcccgcctctccaacgggaagctccccaagggcagc
gatgccggggatgcccccccgccagctgccccccatgcgcggaaagctggccacgagcgg
aaagacggccggtcccccccactcctggagaagcagacccccaccaaagacgtcactgac
aaaccgctggatttgtcggcaaaagtcgtcgacgcggaaaccgccagcaagtcagaccat
ggtaagaaaatgacaccgacggtgctggtgcacggcagggcgggaggggggacgcacttg
cccggcagcgacatcgttcagaaggaaactatttctcctgggaacggctgccccatctac
aggcctgaaattatcagcacagcgccttcctcctggattgttcccggtcccagccccggc
gaggagagtgggaagagcgtccagctgaaaaacaaggcgctggactgggtgatcccgcag
cagcggagctcctcctgccccaggatggggggcacggaggcggtcgtcggcagcgtttcg
gggacggtgtcggcgggggggcggccggcgtcggcgtcgccagctcccaacgccaacgtg
gattgcgccaagacgtcccggagctccgcggagagcaccgcctcagtcatacagcacgtc
gggcagcctgttgccacccccgcgaaacacagcaataaggtggccaagtcctgcggccag
gaagccaacttcaaggcgagcgagaccgccctggcctccagccccatcttcctgccccac
aacgagacgttccgctccccaccgctgccctaccccaggagttacctcccgtacccggtg
ccggaggggatagccatcagtcccctctccctccacgggaaaggacacgtgtatccgcac
cccgtcttgttgcccaacggcagtctctaccctggccacctggctcccaaacctggcctc
ccctacagcctgccggcggggcgcggggagttcatgacctaccaggatgccctggggatg
gggatggtgcaccccatgctgctgcagcattcggctttggaaatcactaaggaggagaag
gcggaaaggaggtcgcggtcgcacgagagggtccgctacgaggacccggctctgaggggc
cggttgccggagctcctggagagcggtgggaaggtgcatttcgacgtgcccggcgacaag
agcttgaaattgcaccagagctccagccacggtaaaaactcagccaaaagtgacaagcac
ctcttcccagatcttctgcgcgacgagcaagaggctaaaagtgaagcaaacgtaacgaaa
gccaactttgctacagaaagcagtaatcaggctaatgaccctacaaagcacaaggtagag
caggcgtcgcagcacagagattttattgtaatgagagaggagtttggaagaagtaatgat
cttcacgaaacctataatttcaagcaagcccagagttcgtcggtgttcggcttaaggaaa
gaagacctgcctgtgagccagccgaaagagagagtggcggtccagccttcgcccgctttc
ttggaaggcgctcacgagagcgatgctccagctctggcttttggcaaggtgcaggaggag
gcgaagccattctgcatggggaccgcgccgcccggcatcgacgccaaccagagctatacc
aaagacggagccgacgacgcggagtctgccgacggcaaaatcctgaagcccaagccgtcc
aagttggccaagaggatcgcgaactccgccggttacgtaggtgatcgattcaagtgtgtg
acgaccgagctgtacgcagactccagccagctcagccgggagcagcgggccttgcagatg
gaaggattacaagaggacagtattttatgtctacctgctgcttactgtgagcgtgcaatg
atgcgcttctcagagttggagatgaaagagagagaaggccaaacagctaccaaagactca
gaggtctgcagattcagccaggcagactgggaaaacttgaaaggaaacagtgaaaagaag
ccaaagtctgtcgctctggaagatgccattgctgaccaaaatgacaatgacagatgtaac
tttactagtacagaaaacaaccaaggtcactttcttgaaactccagaggaaaaagatctc
tcaaatgagcaatgttatttagagaggcattctatatatgaaaaagcggaagaccagcca
acagaagatattggccaacatccatgtccacgtctggacaggaagcgtaaacactctggt
gagagagtgcaaaatgatggcagccaaaatgaaaactttgtggatgaactgcaggatgaa
cttatatcaaaagcaaaaaagaagaagaactccaaagatgactggcctgagagggaaatg
acaaacaattcctctaaccacttagaagagcccaattgtaatgaggtgaccaacctgaag
gtgtgcattgaattaacagggctccatcccaaaaagcagcgtcacctgcagcatcttagg
gaactatgggagcagcaggtgtcaccagagagatccccgtccggcaagttgggccggcaa
agcaggaaagatttagctgaggctgttcagccagaggccactgcaaaggtcaaagacttc
acagaagaaaggcacaccaagaaaaggtcagaggccaaaagcaatagaagttggtctgaa
gagtccctcaaaacaagtgacaatgaacaaggcttgcccgtattcccagtgtctccgcac
atgaagagcctttcatccagcaatgcaaacagcaaaaggcaggctcagccaagctgtact
ccagcctcgaggttggctgccaaacagcagaaaattaaagaaagccggaagacagatggg
ctgtacacagacgaagaggaggatttccaacatgcatctctgctgcagaaatacagcgag
tgtgagaagccatcagggaaacgtcagtgtaaaacaaaacacttggcactgcaggagagg
agaaggaggtcatctctgacaggggatgacaccacagatatcgaaaatgctgaagataag
gtgacggtaacgaggaaggtcaggaagcgaccagagcctacttcggacggcgactcctcg
ccagccaagccctacgagcagaagccgtacgatcgcctgcagcagactcccacctcgctc
cccgtctcgcagcccccccagctgccggtggcaagcccccctcaggagaccacccccagc
cggcccatgccccccgaggcgcgcaggctcatcgtcaacaagaacgcgggggaaacgctg
ctgcagcgggcggcacgcctgggctacgaggaagtggttctgtattgtttggaaaacaag
gtgtgtgatgtgaatcatcgtgacaacgcgggttactgtgccctgcacgaggcgtgcgcc
aggggctggctgagcatcgtgcggcatctccttgagtacggggctgacgtcaactgcagc
gctcaggatggaaccagaccaatccatgacgcggtcgaaaacgatcacttggaaattgtc
cgcctgttactgtcttacggtgctgatccaacgctcgcgacctactctgggaggaccatc
gtgaaaatgacccacagtgagctcatggagaccttcctcacagagtatttaactgacctg
caaggtcgaagtgttgatgaccctggtttgtactgggatttctatggcagctctgtgtgc
gatccgaaagatgagtctggatttgacatcttggcaaatcctcctggcccaggtgatgaa
gatgaagacggctttagcgatgtgtttgaatttgaattttcggatgagcctcccttgccg
tgttacaacattcaagtgtgtctctctcagggaccacgaaactggcttctgctctcggac
gtggtaaagaggctaaaaatgtcatctcgcatcttccgctgcaacttccccaatctggaa
gtcgtcaccatcacggaggcagagttttacaaacagacttccctcagccagttgttctct
tgcgctacggaccttgaagcttttaacccggagagcaaagagctgttggacttggtagag
tttacaagcgaactcaagactttgctgggctcctcgcttcactggttgcatccgcacgag
gaccctcccttcgacatcctctggtga
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