Chroicocephalus ridibundus (black-headed gull): 134519533
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Entry
134519533 CDS
T10910
Symbol
RHBDL1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crid01002
]
134519533 (RHBDL1)
Enzymes [BR:
crid01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
134519533 (RHBDL1)
Peptidases and inhibitors [BR:
crid01002
]
Serine peptidases
Family S54: Rhomboid family
134519533 (RHBDL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580
Motif
Other DBs
NCBI-GeneID:
134519533
NCBI-ProteinID:
XP_063199941
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All DBs
Position
8:complement(40282331..40289513)
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AA seq
372 aa
AA seq
DB search
MDRSSLLQLIQEQLDPENTGFIGVETFASLVHSHELPLDPAKLDMLVALAQGNDEGQVCY
QELVDLISSKRSSSFKRAIANGQRALPRDVLLDETGLGFYKRFVRYVAYEILPCEMDRRW
YFYQHRTCPPPVFMAAVTLTQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAW
RFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISFLYLAGVLAGSLTVSITDMRA
PLVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLP
ASGPQPSFMAHLAGAIVGISMGLTILRSYEESLQDQCGWWVLLLSYGTFLLFAVFWNIFA
YDLLGAQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagctccctgctccagctcatccaggagcagctcgaccccgaaaacaccggc
ttcatcggggtggagacgttcgccagcctcgtgcacagccatgagctgcccctggacccc
gccaagctggacatgctggtggccctggcgcagggcaacgacgaggggcaggtctgctat
caggagctggtagatctgatcagcagcaagcgctcgagcagcttcaagcgcgccatcgcc
aacgggcagcgcgccctgccccgtgacgtgctgctggacgagaccggcctgggtttctac
aagcgcttcgtccgctacgtggcctacgagatcctgccctgcgagatggaccggcgctgg
tacttctaccagcaccgcacgtgtccgccccccgtcttcatggcggccgtcaccctcact
cagatcatcgtgttcctctgctatggggcccggctgaacaagtgggtgctgcagacctac
caccctgagtacatgaagagccctctggtctaccaccccgggcaccgggcacgcgcctgg
cgcttcctcacctacatgttcatgcacgtggggctggagcagctggggttcaacgccctc
ctgcagctgatgatcggggtgcccctggagatggtgcacggcatcctgcgcatcagcttc
ctctacctggccggcgtcctggcaggctccctcaccgtctccatcacggacatgcgggcc
cccctggttgggggctcggggggcgtctatgcgctctgctcggcacacctcgccaacgtc
gtcatgaactgggccgggatgcgctgcccctacaagctgctgcggatggtgctggcgctg
gtgtgcatgagctcggaggtgggtcgggccgtctggttgcgtttttccccgccgctgccg
gcttcgggcccccagcccagtttcatggcccacttggcgggggccatcgtgggcatcagc
atggggctgaccatcctgcgcagctacgaggagagcctgcaggaccagtgcggctggtgg
gtgctgctcctctcctacggcaccttcctcctcttcgccgtcttctggaacatcttcgcc
tacgacctgctgggggcacaaatccccccccctccataa
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