Chroicocephalus ridibundus (black-headed gull): 134519565
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Entry
134519565 CDS
T10910
Symbol
XYLT1
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
crid00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
crid01100
Metabolic pathways
Module
crid_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
134519565 (XYLT1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
134519565 (XYLT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crid01003
]
134519565 (XYLT1)
Enzymes [BR:
crid01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
134519565 (XYLT1)
Glycosyltransferases [BR:
crid01003
]
O-Glycan biosynthesis
Glycosaminoglycan
134519565 (XYLT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
134519565
NCBI-ProteinID:
XP_063199999
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All DBs
Position
8:47713882..47918681
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AA seq
921 aa
AA seq
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MVAAPCARRLARHSRSALVAALTVLLLQTLLVWNFSSLDAGEEQRGGGGREKRDRGGDQR
AHPQRRGPAAPHGKAMIEPPSPYTSLETQDGYFSHRPKEKMRTDSNNENSVPKDFENIDN
SNFAPRTQRQKHQSELVKKPLSKQKEHLRKKLEEEKMKENLLLGKNSNEVVQFSDHPRKN
SSSISNNNFKEIHMSPKQHHLKKNGNSSPELRYDQPPKCEVTGKEAISAMSRAKSKQCRQ
EIADVYCQHKHGKLMPEKVTRFCTLEGKANNNVQWDEDSVEYMPANPVRIAFVLVVHGRA
SRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVLHFANQYPNVRVTSWRMATIWGGASLL
STYLQTMKDLMEMNDWPWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARF
IRKQGLDRLFLECDTHMWRLGDRRIPEGIAVDGGSDWFLLNRKFVEYVTFSNDDLVTKMK
RFYSYTLLPAESFFHTVLENSPYCDSMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPND
FKPADFHRFQQTARPTFFARKFEAVVNQEIIGQLDYYLYGNYPSGTPGLRSYWENVYDEP
DGVHTLSDVALTMYHAFSRLGLRRAETSFHAAGDNSCRYYPMGHPVSVHLYFLADRFQGF
LIRHHATNLAVSKLETLETWVMPKKVFKIASPPSDFGRLQFSEIGTEWDAKERIFRNFGG
LLGPTDEPVGMQKWGKGPNVTVTVIWVDPVNVIAATYDILIESSAEFTHYKPPLNLPLRP
GVWTIKILHHWVQVAETKFLVTPLTFSNWQPIKQEEAMKHHSGPPKNAYMEQSFQGLNPV
LNIPISAARVEQAKRNAGLVGAQLEAWVDSLVGSVWSAVDICSAGPTACPVMQGCAQTAW
SSLSPDPKSELGPVKPDGRLR
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgctccgtgcgcccggcggctggcacggcactcccgctcggcgctggtggcg
gcgctcaccgtgctgctcctgcagaccctcctcgtctggaatttcagctccctcgacgcc
ggcgaggagcagcgcggcggcggcggccgcgagaagcgagaccgcggcggggaccagcgg
gcgcacccgcagcgccggggacccgccgccccgcacggcaaggcgatgattgaacctcct
agtccctacaccagcttggaaactcaggatggctatttttcccaccgaccgaaagagaaa
atgcgaacagacagcaataatgaaaattcagtccccaaggactttgaaaatattgataac
agtaactttgctcccaggactcagaggcaaaaacaccagtctgagctggtgaaaaaaccc
cttagcaagcaaaaggagcacttgagaaagaaactggaagaggagaagatgaaggagaac
ttgctgctggggaagaactccaatgaggtggtgcaattcagtgatcaccccagaaaaaac
agcagcagcatcagcaacaacaatttcaaggagattcatatgtctcccaaacagcatcat
ttaaaaaaaaatggaaacagctcccctgaactgagatacgatcagccaccaaagtgtgag
gtaacaggcaaagaggcaatctcagccatgtcccgggctaaatctaagcagtgtcggcag
gagatcgcagacgtgtattgtcagcacaagcatggaaagctgatgccggagaaggtgacg
cgtttctgtacgctggagggaaaagccaacaacaatgtacagtgggatgaggactccgta
gaatacatgccagccaacccagtcaggatcgcatttgtcttggttgttcatggcagagct
tctcggcagctccaacgcatgtttaaggctatttaccataaagaccatttttattacatt
catgttgacaagcgatccaattacttgcaccggcaagtgctccactttgccaaccagtac
ccaaatgtgagagtcacttcttggagaatggcaactatctggggaggagcaagtcttctg
tccacctacctgcagaccatgaaggacttaatggagatgaatgactggccgtgggatttc
ttcattaacctcagtgctgctgactacccaatcaggacaaatgaccagctagtagcattc
ctgtccagatatcgtgatatgaacttcttgaaatcacatgggagggacaacgcaagattt
atcagaaaacaaggactggatcggcttttcctggaatgcgatacccacatgtggcgtctg
ggggaccggaggatcccagaaggaattgcagttgatggagggtcagactggtttctcctg
aacaggaagtttgtggagtatgtcactttttctaatgatgatctggtaacaaagatgaag
agattttactcttacaccttgcttcctgctgagtccttctttcacactgttctggaaaat
agcccgtactgtgactccatggtggacaacaacttgcgcatcacgaactggaaccgtaaa
ctcggttgcaagtgtcagtacaagcacattgttgactggtgtggctgttcacctaatgac
ttcaaaccagcagacttccacagattccagcagactgccaggccaactttctttgcccgc
aaatttgaagctgtagtgaatcaagagataattggccagttggactactacttgtatggc
aactacccctctggcactccgggcctccggtcctactgggagaatgtgtacgatgagcct
gacggcgtgcacaccctcagcgacgttgccctcaccatgtaccatgcgttctcccgcctg
ggcctgcggagagccgagacttcattccatgctgccggagataacagctgccgatactac
cccatgggccatccagtttccgtccacctttacttccttgctgaccgtttccaaggcttc
ctaatcagacaccacgcaaccaatctggctgtcagtaaactggaaactttggaaacctgg
gtgatgccaaagaaagtctttaagattgcaagtccaccaagtgattttggaaggctgcag
ttctcagagattggcactgaatgggacgccaaggaaaggattttccggaattttggagga
ctccttgggccgacagatgagccggttggcatgcagaaatggggaaaaggccccaatgtc
accgttactgtcatttgggtggatcctgttaatgtaattgcagcaacatacgatatcctt
attgaatccagtgccgaatttactcactacaaaccacctttgaatttgcccctgcgaccc
ggtgtctggacaataaaaattctgcaccactgggtacaggtagctgaaaccaaattcctt
gttactcctctcaccttctctaattggcagcctatcaaacaagaggaagccatgaagcat
cacagcgggcctccgaaaaacgcgtacatggagcagagcttccagggcttgaaccctgtc
ctgaatatccccatcagtgctgcccgcgtggagcaggccaagaggaacgcggggctcgtg
ggtgcccagctggaagcctgggtggactctctggtcggcagcgtctggtcagctgtggac
atctgcagtgccggccccaccgcctgcccagtcatgcagggctgtgctcagacagcctgg
agctccctcagcccggaccccaaatccgagctgggccccgtcaaacccgacggtcgcttg
aggtag
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