Chroicocephalus ridibundus (black-headed gull): 134519613
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Entry
134519613 CDS
T10910
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134519613 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crid03041
]
134519613 (PRPF38B)
Spliceosome [BR:
crid03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
134519613 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
134519613 (PRPF38B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
134519613
NCBI-ProteinID:
XP_063200099
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All DBs
Position
8:24321100..24330772
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AA seq
547 aa
AA seq
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MANNSPAVGAGNCQGQQAAQHQPGAVPPAQQQLQSGAPKPAASGKQGNVLPLWGNEKTMN
LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR
GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW
FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQQIKSRP
RKIKKDGKEGMEEIDRHAERRRSRSPRRSISPRRSPRRSRSRSHHREGHGSSSFDRELER
ERERQRLEREAKEREKERRRSRSTDRTVERRRSRSRDRYRSRSRSRDRKADRRDRDRERE
KENERSRKKERDYDKERGSEREKDRSRERSKERKSKGDTEERRHKDDKDDKKHRDDKRDS
KKERKHSRSRSRERKHRSRSRSKNTGKRSRSRSKEKSSKHKNESKEKSNKRSRSRSRGRT
DSVEKSRKRDQSPSKEKSRKRSRSKERSHKHDHSDSKDHSDKHDRRRSQSTERESQEKQQ
KNKDETV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatagccccgccgtcggcgccgggaactgccaggggcagcaggcggcccag
caccagcctggcgccgtcccgccggcccaacagcagctgcagagcggagcccccaagccg
gcggcctccggcaagcagggcaacgtgctgccgctgtgggggaacgagaagaccatgaac
ctgaacccgatgatcctcaccaacatcctctcgtcgccctacttcaaggtgcagctctac
gagctcaagacttaccacgaagtggtggacgagatctacttcaaggttacacacgttgaa
ccatgggaaaaggggagcagaaaaacagcaggccagacagggatgtgtggaggggtgcgt
ggtgttggaactggaggaatcgtgtctactgccttttgtctgctctacaaattatttaca
ctgaaactcactcgtaagcaagtgatgggccttataactcatacagactctccatatatt
agggctcttggatttatgtatattaggtacacacaaccacctacagatctatgggactgg
tttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggcgggggttgtgtt
atgaccatcggggagatgcttcgttccttcctcactaagcttgaatggttttccacgttg
tttccaagaattcctgtgccagtccagaaagccattgaccagcaaattaaaagcagacct
agaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccgtcatgcagaacgt
agacgttcaaggtctccaaggcgatccatcagtcccaggaggtctcccagaagatccaga
agcagaagtcatcatcgggaaggccacggatcatctagttttgatagagaactagaaaga
gaaagagaacggcagagattagaacgtgaagctaaggagagagaaaaagagaggcggaga
tctcgaagtactgatcgcacagtagaacggaggcgaagcagaagcagggacagatacaga
agccgtagtcgaagtcgtgacaggaaagcagatagaagagacagggatagagagcgagag
aaagaaaatgaacggagccggaaaaaagagagagattatgataaggaaagaggcagtgag
agggaaaaagatagatctagagaaagatcaaaagaaaggaaaagtaagggtgatacagaa
gagagaagacacaaggacgataaggatgacaagaaacaccgggatgacaagagggattcc
aaaaaagagagaaaacacagcagaagccgaagccgggaaagaaagcataggagtaggagc
cgaagtaagaatacaggtaagcgtagcagaagcaggagcaaagagaaatcaagtaaacat
aaaaatgaaagtaaagagaagtcaaataaacgaagtagaagcagaagcagaggaagaaca
gatagtgttgagaagtccagaaaacgagaccagagtcccagcaaagaaaaatctagaaag
cgtagcagaagcaaagaacgttcccacaaacacgatcacagtgatagcaaggaccattcg
gacaaacacgatcgtcgaaggagccaaagtacggaacgagagagccaagaaaagcaacag
aaaaacaaagatgagactgtgtga
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