Chroicocephalus ridibundus (black-headed gull): 134519742
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Entry
134519742 CDS
T10910
Symbol
CASKIN1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134519742 (CASKIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134519742 (CASKIN1)
Membrane trafficking [BR:
crid04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
134519742 (CASKIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_5
Caskin-Pro-rich
Caskin1-CID
Ank_4
SAM_2
Ank_3
Caskin-tail
Ank_KRIT1
SH3_2
SAM_TNK
SH3_9
SH3_1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
134519742
NCBI-ProteinID:
XP_063200377
LinkDB
All DBs
Position
8:50481460..50515733
Genome browser
AA seq
1543 aa
AA seq
DB search
MGKDQELVQAVKAEDIAAVQKLLQRPKPGKAKLLGSAKRVNVNFQDTDGFSALHHAALNG
NTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGKKEPMKMVLKAGSSVNIPSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCIMDNSGKTPLDLACEFGRVGVVQLLLNSNMCAALLEPK
PGDATDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTDVVRLL
LDSGINAHVRNTYNQTALDIVNQFTTSQASKEIKQMLRDASAALQVRAVKDYCNNYDLTS
LNVKAGDVITVLEQHADGRWKGCIHDNRTGNDRVGYFPSSLVEAISKRTGSWETVTIPQQ
YQKIPLPAYGAAVLNGDASSHPFHSLPPPPPPPPHSHQTLFSSFGYHRLSPSSADEPRYG
QGSRGADMSPSHLSPSQGGSATPAPAEEIWVLRKPFAGGDRSSLGSTGSVASARSSGSGQ
SAGSGAHALHAGSEGVKLLATVLSQKASAQETAVGDGPAKAQDIPAGSSRSQSVASSPYA
PQPPAEPQLKKMEPPSEGKSSEAVYQWLCKFQLQLYAPNFINAGYDITTISRMTPEDLTA
IGVTKPGHRKKIASEINNLNIPEWLPEYKPANLALWLSMIGLSQYYKVLVENGYENIDFI
TDITWEDLQEIGITKLGHQKKLMLAVKKLAELQRAELGKYEPGTLKRKAAATCPEVLAIE
SPPPEPPECQSPKMTTFQDSELSSELQVAMTGEAPEEPPEKAANPAAPGYHSPPGLGGRA
RLMSSSQELLGDGPRVPPASAISKSQEYLAEGAGEGPPAPPKEVRPPRHGHPVKRASVPP
VPGKPRQPFQPSAGHLTPPQTPGKPRPPSPQGPPVPHATAKVKPTPQLLPPGERPASPRS
LPQSPTHRGFAYVLPQPTEGEGGPPGVPVLPVSVPVLCLPPAGEGEEEPGRPKKRAHSLN
RYAASDSEQERDELLVPDAGPYATVQRRVGRSHSVRAPAGGDKNVNRSQSFAVRPKKKGP
PPPPPKRSSSAISSAGMAEDFPKEGEGEVATGPPAAEGDSRREQRRASDLGGSVDTGSAG
SVRSIAAMLEMSSIGGGARALALQKPHGAGGPGPAKAPEGYYLQPGAPPGSPERARVATV
LATVKHKEAIGLDGEVVNRRRTISGPVTGLVAAARRERADSVRSEVGTDGPSERLRVERG
GSPDGIPFAEEGNLTIKQRPRPLGPARGEAGEGLSPAHRHGDLAKVEASATLKRRIRARQ
SQQDGVRFVLTESDTVKRRPKAKDKEPTLEPAPLAVYQNGTGTVKRRPASELSGAEPPPT
PPPAARPDGPEYAPPPAEPKKPFKPPVSPKPVLTQPPQKVSGPPAPIPKKVPIPSPGSPE
VKRVHGTPPPVSPKPVPPPTAPKPPKPHAAIQSVSASSTPAPSPARQLGATAAKPSSTPP
SLCSSPAKPLSPGAQPQQVPVKPPRSAIAGPSVDTAGPELAQQKLEETSASLAAALQAVE
EKIKQEDSQAADSAVESKSTVSILDDIGSMFDDLADQLDAMLE
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaccaggagctggtgcaggcggtgaaggcggaggacatcgcggccgtgcag
aagctgctgcagaggcccaagcccggcaaagccaagctcctcggatcggcaaaaagagtc
aacgtcaacttccaagacaccgacgggttctcagctctgcaccatgcggcactcaacgga
aacacggagctcatctcgctgctgctggaggcacaggctgcggtggacatcaaggacaac
aaaggcatgcggcccctgcactatgcggcttggcaaggcaagaaggagcccatgaaaatg
gtgctgaaagcgggttcctctgtgaacatcccatcggacgagggccagatccccctgcac
ctggcggcacagcacgggcactacgacgtgtcggagatgctcctgcagcaccagtccaac
ccctgcatcatggacaattcagggaagacgcccctggacctggcgtgcgagtttggccgg
gtcggggtggtccaactgctcctgaacagcaacatgtgcgcggcgctgctggagcccaag
ccgggggacgccaccgaccccaacggcaccagccccctgcacctcgccgccaagaatggc
cacatcgacatcatccggctcctgctgcaggctggcattgacatcaaccggcaaaccaag
gcaggcacggcgctgcacgaggcggccctctgcggcaagacggatgtggtgcggctgctg
ctggatagcgggatcaacgcccacgtcaggaacacctacaaccagacggctctggacatc
gtcaaccagttcaccaccagccaggccagcaaggagatcaagcagatgctgcgggacgcc
tccgccgctctgcaggtccgggccgtcaaggactattgcaacaactacgacctgaccagc
ctcaacgtgaaagccggggacgtcatcaccgtgctggagcagcacgcggatgggcgctgg
aagggctgcattcacgacaaccggaccggcaacgaccgcgtgggctacttcccctccagc
ctcgtcgaggccataagcaaacgaacaggttcatgggagactgtaacaatcccccaacag
taccaaaagatcccgctcccggcttacggggctgctgtgctaaacggtgacgcctcgtcc
catccgttccattccctgcctccacctccacctccaccaccacattcccatcagactctt
ttcagttcctttggctatcacaggctctcccctagcagtgccgacgagccgcgttacgga
caagggtcccgcggggctgacatgagcccatcccacctctcaccgtcacaaggcggatca
gccacgccggctcccgcggaggagatctgggtgctgcggaaaccctttgcaggtggtgac
cgcagcagcctgggcagcacgggcagcgtggcctctgcccgcagctcgggaagcgggcag
agcgcaggcagcggggcgcacgccctgcacgctggctctgaaggcgtcaagctgctggca
acggtcctttcccagaaggcttctgcgcaagagactgccgtgggcgatgggccggccaag
gcgcaggacatccccgcaggttcatcacggtcgcagagtgtggccagctccccgtatgcc
ccccagcctccggctgagccccagctgaagaagatggagccaccatcggaggggaagagc
tcagaggccgtgtaccagtggctctgcaagttccagctgcagctctacgcgcccaacttc
atcaatgccggctacgacatcaccaccattagccggatgacgccagaggacctcacggcc
atcggcgtcaccaagccggggcacaggaagaagattgcctccgagatcaacaacctcaat
atccctgaatggctgccggagtacaagccggccaacctggcgctgtggctctccatgatc
ggcctgtcccagtactacaaggtgctggtggagaacggctatgagaacatcgacttcatc
accgacatcacctgggaggacctgcaggagatcggcatcaccaagctgggccaccagaag
aagctgatgctggcagtgaagaagctggcggagctgcagcgcgctgagctgggcaagtac
gagccaggcacgctgaagaggaaggcagcggcgacatgcccggaggtgctggccattgag
tctcccccaccagagccacccgaatgccagtcacccaagatgaccaccttccaggacagc
gagctcagcagcgagttgcaggtggccatgacaggagaagctcctgaggagccccctgag
aaggcagcgaaccctgcagcccctggctaccactcgccacccgggcttggtggccgtgcc
aggctgatgagcagctcgcaggagctgctgggggatggcccccgggtcccccctgcctct
gccatctccaagagccaggagtacctggcggagggggctggcgagggcccccctgcgcca
cccaaagaggtgcgcccgccccggcatggccaccccgtcaagcgtgccagcgtgccacca
gtgcccggcaagccccggcagcccttccagccctccgccgggcacctgacgccgccgcag
acccccggcaagccgcgacccccttccccacagggcccgccggtgccccatgccaccgcc
aaggtgaagcccaccccgcagctgctgccgccgggcgagcgccccgcgtcaccccgctcc
ctgccccagtcgcccacccaccgtggcttcgcctacgtcctgccacagcccaccgagggt
gaggggggacccccgggggtgcccgtcctgcctgtctcggtgccggtgctgtgcctgccg
ccggcgggtgagggcgaggaggagccggggcggccgaagaagcgggcgcacagcctgaac
cgctacgctgcctccgacagcgagcaggagcgggacgagctgctggtgccggacgcgggg
ccctacgccaccgtccagcggcgcgtggggcgcagccactcggtgcgggcacccgccggc
ggcgacaagaacgtcaaccgcagccagtcctttgccgtccgccccaagaaaaaggggccc
ccgccgccccctccaaagcgctccagctctgccatctccagcgccggcatggctgaggac
ttccccaaggagggtgagggcgaggtggccaccgggccacctgctgccgagggggacagc
cgccgggagcagcgtcgggccagcgacctgggcggcagcgtggacacgggcagtgccggc
agcgtgcgcagcatcgcggccatgctggagatgtcctccatcggcggtggggcccgggca
ctggcgctgcagaagccacatggggccggtgggccaggaccagccaaggcgcctgagggc
tactacctgcagccaggagcacccccaggcagccctgagcgtgcccgtgtggccactgtc
ttggccaccgtcaagcacaaggaggcgatcgggctggatggggaggtggtgaaccggcgc
cggaccatcagcggacctgtcaccgggctggtggcggccgcccgccgcgagcgcgccgac
agcgtgcggtcggaggtgggcactgacggccccagcgagcggctgcgggtcgagcgtggc
ggctccccggacggcatcccctttgccgaggagggcaacctcaccatcaagcagcggccg
cggcccttggggccagcccggggagaggcgggtgaggggctgtccccggcccaccgccat
ggggacctggccaaggtggaggccagcgccacgctcaagcggcggatccgggccaggcag
agccagcaggacggcgtccgctttgtcctcaccgagtccgacaccgtcaagcgccggccc
aaagccaaggacaaggagccgacgctggaaccggccccgctcgccgtctaccagaacggc
actggcaccgtcaagcggcggccggcctccgagctgagcggggctgagccaccccctacc
ccgccgcccgctgcccgccccgatggccccgagtacgccccgccgcctgccgagcccaag
aagcccttcaagccgccggtgtcccccaagcccgtactgacacagccgccccagaaggtg
tctggaccaccggcacccatccccaaaaaggtgcccatcccgagccccggcagcccagag
gtgaagcgggtccacggcacgccgccccccgtgtcccccaaacccgtgccgccccccacg
gcgcccaagccccccaagccccatgctgccatccagtcggtgagcgccagctccacgccg
gccccgtcccccgcccgccagctgggtgccaccgccgccaagccctccagcacgccgccc
tcgctctgctccagccccgccaagcccctctcgcccggcgcacagccccagcaggtgccg
gtgaagccaccgcgttccgctatcgccggcccctccgtcgacaccgccggccctgagctg
gcgcagcagaagctggaggagacgagcgcgtccctggccgccgcgctgcaggccgtggag
gagaagatcaagcaggaggacagccaggcggcagactcggccgtggagtcgaagagcacc
gtgagcatcctggacgacatcggcagcatgttcgacgacctggcggaccagctggacgcc
atgctggagtga
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